Monodelphis domestica (gray short-tailed opossum): 100028675
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Entry
100028675 CDS
T01031
Symbol
TAF5
Name
(RefSeq) TATA-box binding protein associated factor 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100028675 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdo03021
]
100028675 (TAF5)
03036 Chromosome and associated proteins [BR:
mdo03036
]
100028675 (TAF5)
Transcription machinery [BR:
mdo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100028675 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
100028675 (TAF5)
Chromosome and associated proteins [BR:
mdo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
100028675 (TAF5)
STAGA complex
100028675 (TAF5)
TFTC complex
100028675 (TAF5)
SAGA complex
100028675 (TAF5)
SLIK complex
100028675 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_Gbeta
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_Aladin
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_VPS8
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_WDR41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD_LRWD1
Tricorn_2nd
Beta-prop_DCAF12
Beta-prop_Nup120_160
Beta-prop_RIG_1st
RAB3GAP2_N
CDK5RAP3
eIF2A
Cytochrom_D1
Beta-prop_ACSF4
VPS8_N
Motif
Other DBs
NCBI-GeneID:
100028675
NCBI-ProteinID:
XP_001378650
Ensembl:
ENSMODG00000011095
UniProt:
F7DL63
LinkDB
All DBs
Position
1:complement(108658672..108676510)
Genome browser
AA seq
825 aa
AA seq
DB search
MAALAEEQTEVVIKPDPEGPQALPATQPGDCPGEGSGSSHNSSHNGGGGGSGGVAASSAG
GDGGTPKPAVVPQAAAVAAAGTAAPGGAAGASAATAEGIASQDRQTLLAVLQFLRRSNLR
ESEEILRREARLLEEAAGAGALGEADGPGTEAAIALLSRVTAAAGPTGPGPGSGSGPGPG
PGACPASAGSGAIGASTGNSGAASATAAPAKVGVVAVEDQPDVSAVLSAYNQQGDPAMYE
EYYSGLKHFIECSLDCHRAELSQLFYPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYY
QDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQE
HLYIDIFDGMPRSKQQIDAMVGSLAGEAKREANKAKVFFGLLKEPEIEVPLDDEDEEGEN
EEGKPKKKKPKKDSMGSKSKKQDPNAPPQNRIPLPELKDSDKLDKIMNMKETTKRVRLGP
DCLPSICFYTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKTATDLSL
IDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTF
TCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRF
HPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLL
WDIGHGLMVGELKGHTDTVCSLKFSRDGEILASGSMDNTVRLWDAIKAFEDLETDDFTTA
TGHINLPENSQDLLLGTYMTKSTPVVHLHFTRRNLVLAAGAYSPQ
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctggcagaggaacagacagaggtggtgatcaagcctgacccggagggaccg
caggcgctccctgccacgcagccgggcgactgtccaggcgagggcagcgggagcagccac
aacagcagtcataacggaggtggcggcggcagcggcggtgtagcggcgtcttcagccggc
ggcgatggcgggaccccgaagcccgccgtggttcctcaggcagcagctgttgctgcggct
gggacagcggctccgggcggcgcggctggggcttcggcagcgactgccgagggcatcgcc
tctcaggaccggcagaccctgctggctgtgctgcagtttctacggcggagcaacctacgc
gagtctgaggagatcctgcggcgcgaggcccggctgctggaggaggcggcgggagctggc
gccctcggggaggcggacgggcccgggaccgaagccgccatcgcgctcctaagccgggtc
accgccgccgccgggcccacgggcccgggccctggctcgggttccggccccggccccggc
cccggcgcctgccccgcgtccgctggctctggtgctatcggggccagcacggggaactcg
ggagccgcttcggccacggcagctccggccaaagttggagtagttgccgtagaagaccag
cctgatgtcagtgcagtgctgtctgcctataatcaacaaggggatccagcaatgtatgaa
gaatactatagtggattaaaacatttcattgaatgttccctggactgtcatcgagcagaa
ttatctcagttattttatcctttgtttgtacatatgtacttggaattggtctacaatcag
cacgaaaatgaagcaaaatcattctttgagaagtttcatggcgatcaggaatgttattat
caggatgatcttcgagtattatctagccttaccaaaaaggagcacatgaaagggaatgag
actatgttggattttcgaacaagtaaattcgttttgcgaatttcccgtgactcttaccaa
ctcttgaaaagacacctccaggagaaacagaacaaccaaatatggaacatagtccaggag
cacctgtatattgacatcttcgatgggatgcctcggagtaagcaacagatagatgctatg
gtgggaagtttggccggagaggcaaagcgagaggcaaataaggcaaaggttttttttgga
ttgttaaaagaaccagaaattgaagttcctttggatgatgaagatgaagaaggggagaat
gaagaaggaaagcccaaaaaaaagaaacctaaaaaagatagtatgggatctaaaagcaaa
aaacaagatcctaatgctccacctcaaaacagaattcctcttcctgaattgaaagattca
gataagttggataaaataatgaacatgaaggaaactacgaaacgtgtgcgacttggtcca
gattgtttaccttccatctgtttctatacattccttaatgcctatcagggtctcactgca
gttgatgtcactgatgattccagcctgattgcaggaggttttgctgattccactgtcaga
gtatggtctgtaactcccaaaaagcttcgtagtgtgaagacagcaacagacctcagcctc
atagacaaagaatctgatgatgttttagaaagaatcatggatgagaaaacagcaagtgaa
ttgaagattctatatggtcacagtgggcctgtttatggggcaagcttcagtcctgacaga
aactacctactttcctcctcagaagatggcactgttagactatggagcctccaaacattt
acttgtttggtaggatacaaaggacacaactatccagtttgggatacacagttttctcca
tatggatactattttgtttcaggaggacatgacagagtagctcggctgtgggctacagat
cattatcagcctttacgaatatttgccggccaccttgctgatgtgaactgtacgagattt
catccaaactctaactacgttgctacaggttcagcagacagaacagtaaggctctgggat
gtcttgaatgggaactgtgtaaggatcttcactgggcataagggaccaattcattctttg
gctttttctcccaatgggagattcctggctactggagcaacagatggcagagtacttctt
tgggatattggacatggcttgatggttggagaattaaaaggccatacagatacagtatgt
tcacttaagtttagtagagatggagaaattttagcatcaggttcaatggataacacagtt
cgtttgtgggatgccataaaagcatttgaagacctagagactgatgactttactacagcc
actggacatataaacttgcctgaaaattcacaggatttattattgggaacatatatgaca
aagtcaacaccagttgtacatctccattttactcgcagaaacttggttttagctgcagga
gcttatagtccacaataa
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integrated database retrieval system
