Monodelphis domestica (gray short-tailed opossum): 100028736
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Entry
100028736 CDS
T01031
Symbol
TBP
Name
(RefSeq) TATA-box binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03022
Basal transcription factors
mdo05016
Huntington disease
mdo05017
Spinocerebellar ataxia
mdo05165
Human papillomavirus infection
mdo05166
Human T-cell leukemia virus 1 infection
mdo05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100028736 (TBP)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100028736 (TBP)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
100028736 (TBP)
05165 Human papillomavirus infection
100028736 (TBP)
09164 Neurodegenerative disease
05016 Huntington disease
100028736 (TBP)
05017 Spinocerebellar ataxia
100028736 (TBP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdo03000
]
100028736 (TBP)
03021 Transcription machinery [BR:
mdo03021
]
100028736 (TBP)
Transcription factors [BR:
mdo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
100028736 (TBP)
Transcription machinery [BR:
mdo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100028736 (TBP)
RNA polymerase III system
TFIIIB
100028736 (TBP)
RNA polymerase I system
SL1/TIF-1B
100028736 (TBP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
TFIIA
ANAPC_CDC26
VPS13_N
Motif
Other DBs
NCBI-GeneID:
100028736
NCBI-ProteinID:
XP_007485006
Ensembl:
ENSMODG00000005484
UniProt:
F7CFV3
LinkDB
All DBs
Position
2:456778510..456802288
Genome browser
AA seq
308 aa
AA seq
DB search
MDQNNSLPPYAQGLASPQGAMTPGIPLFSPMMPYGTGLTPQPVQSTSSLSILEEQQRQQQ
QQQQQQQQQAAQQAATQQATQGTSGQTPQLFHSQTLTTAPLPGTTPLYPSPMTPMTPITP
ATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTA
LIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLE
GLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPI
LKGFRKTT
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaaacaacagcttgccgccttatgcccagggcttggcctctcctcagggtgcc
atgactcctggaattcctctctttagcccaatgatgccctatggtactggactgactccc
caacctgtccaaagcacaagcagtctttctattctggaagagcagcagaggcagcagcag
cagcagcagcagcagcaacagcagcaagctgcccaacaggctgcaactcaacaagcaaca
cagggaacttctggccaaaccccacagctcttccattcacagactcttaccacagcacct
ctgccgggcactacacccttgtatccttccccaatgacccctatgacccccattacacca
gccacacctgcatctgaaagttctgggattgtaccacagctacagaacattgtatctacc
gtgaatcttggttgtaaacttgacttaaaaaccattgcacttcgtgcccgaaatgctgaa
tacaatcccaagcgttttgctgcagtcatcatgagaataagagagccaagaactactgca
cttattttcagttctgggaagatggtgtgcacaggagctaaaagtgaagaacagtccaga
ttagcagccaggaaatatgccagagttgtacaaaaattgggctttccagccaagttcctg
gattttaagattcaaaatatggtggggagctgtgatgtgaagtttcccataagattagaa
gggttggtactgacgcatcaacaatttagcagttatgagccagagttgtttcctggatta
atctacagaatgatcaaacccagaattgttctgcttatttttgtttctggaaaagttgta
ttaactggtgctaaggtcagagcagagatctacgaagcattcgaaaacatttaccctatt
ctaaaaggattcaggaaaacaacgtaa
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integrated database retrieval system
