Monodelphis domestica (gray short-tailed opossum): 100028878
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Entry
100028878 CDS
T01031
Symbol
RBM39
Name
(RefSeq) RNA binding motif protein 39
KO
K13091
RNA-binding protein 23/39
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mdo03041
]
100028878 (RBM39)
Spliceosome [BR:
mdo03041
]
Common components
Common spliceosomal components
General mRNP proteins
100028878 (RBM39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
Motif
Other DBs
NCBI-GeneID:
100028878
NCBI-ProteinID:
XP_001371651
Ensembl:
ENSMODG00000001557
LinkDB
All DBs
Position
1:complement(389111341..389139492)
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AA seq
524 aa
AA seq
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MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHDRKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRERRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQSEVTALAAAASVQPLATQCF
QLSNMFNPQTEDELGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIA
AVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPVRR
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatattgaagcaatgcttgaggctccttataagaaggatgagaac
aagttgagcagtgctaacggccatgaagagcgtagcaagaagagaaaaaaaagcaagagt
agaagtcgaagtcatgatcgaaagaggagcaaaagtaaggaacggaaacgaagcagagac
cgggagaggaaaaagagcaaaagccgtgaacggaaacgtagccgaagcaaagaacgaaga
cgaagtcgttctagaagtagagaacgtcgtttcagaggccgatatcgaagtccctactcc
ggaccaaaatttaacagtgccatccgtggaaagattgggttgcctcatagcatcaaatta
agcagacgccgctcaagaagcaaaagtccattcagaaaagacaagagccctgtgagggaa
cctatcgacaaccttactccagaggagagagatgccaggactgtgttctgcatgcagctg
gcagcaagaattagaccaagagatttggaggagtttttttctaccgtaggaaaggtccgt
gatgtaaggatgatttctgatagaaattcaagaagatccaaaggaattgcttatgtagag
tttgttgatgttagctcagtgcctctagcaataggattaactggccagcgtgtcttagga
gtgcccatcattgtacaggcctcacaggcagaaaagaatagagcagcagcaatggcaaat
aacctacaaaaaggaagtgctggacctatgagactttatgtaggatcattacactttaac
ataactgaagatatgcttcgtggaatctttgagccttttggcaggattgaaagcattcag
ctgatgatggatagtgaaactggtcgatccaaaggatatggatttattacattttcagat
tcagagtgtgccaaaaaggcattggaacaactgaatggatttgaattggcaggaaggcct
atgaaagttggtcatgttactgaacgtactgatgcttccagtgccagttcatttttggat
agtgatgagctggaacggactggaatcgacttgggaacaactggtcgtctccaattaatg
gcaagacttgcagaaggtacaggtttacagattcctccagcagcacaacaagctctgcaa
atgagtggatctttagcatttggagctgtagcagatttacaaaccagactttcccaacag
agtgaggttacagctctagctgcagctgcttctgtacagcctcttgcaacacagtgtttc
cagctttccaatatgtttaatcctcaaacggaagatgaacttggctgggatacagaaata
aaggatgatgtaattgaagaatgtaacaaacatggaggagtcattcatatttatgttgac
aaaaattcagctcagggcaatgtgtatgttaagtgcccctcaattgctgcagccattgca
gcagtaaatgcattgcatggaagatggtttgctggtaaaatgattacagctgcatatgta
cctcttccaacttatcacaacctcttccctgattccatgacagcaacacaactactggtt
cccgttcgacgatga
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