Monodelphis domestica (gray short-tailed opossum): 100029287
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Entry
100029287 CDS
T01031
Symbol
CLTCL1
Name
(RefSeq) clathrin heavy chain like 1
KO
K04646
clathrin heavy chain
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04142
Lysosome
mdo04144
Endocytosis
mdo04721
Synaptic vesicle cycle
mdo04961
Endocrine and other factor-regulated calcium reabsorption
mdo05016
Huntington disease
mdo05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100029287 (CLTCL1)
04142 Lysosome
100029287 (CLTCL1)
09150 Organismal Systems
09155 Excretory system
04961 Endocrine and other factor-regulated calcium reabsorption
100029287 (CLTCL1)
09156 Nervous system
04721 Synaptic vesicle cycle
100029287 (CLTCL1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
100029287 (CLTCL1)
09164 Neurodegenerative disease
05016 Huntington disease
100029287 (CLTCL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mdo04131
]
100029287 (CLTCL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mdo04147
]
100029287 (CLTCL1)
Membrane trafficking [BR:
mdo04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
100029287 (CLTCL1)
Exosome [BR:
mdo04147
]
Exosomal proteins
Proteins found in most exosomes
100029287 (CLTCL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_PEP5_VPS11
TPR_Vps41
Gp18_dom_I
capSnatchArena
Motif
Other DBs
NCBI-GeneID:
100029287
NCBI-ProteinID:
XP_007490545
Ensembl:
ENSMODG00000010107
LinkDB
All DBs
Position
3:complement(514279556..514359380)
Genome browser
AA seq
1741 aa
AA seq
DB search
MAQILPIRFQEHFQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMSDPAA
PIRRPISAESAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMAEEVTFWKWVSVNTVA
LVTDTAVYHWSMEGDSQPLKVFDRHASLAGCQIINYRTDDHQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFAEFKIEGNSKTSTLFCFAVRSPTGGKLHIIEVGQPAAGN
QPFGKKALDVFFPPEAQTDFPVAMQIGVKHGVIYLITKHGYIHMYDLESGTCIYMNRISA
DTVFVTASHEPTSGIIGVNKKGQVLSVCVEEENIVSYATNVLQNPDLGLRMAIRSNLAGA
EELFARKFNTLFAQGSYAEAAKVAASAPKGVLRTSDTIRKFQSVPAQAGQASPLLQYFGI
LLDQGQLNRSESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKAADPTLALSVYL
RASVPSKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRSVMRVSPEQGLQLAQMLVQDE
EPLANINQIVDVFMENSLIQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLINFFGSLSV
EDSVECLRAMLSANIRQNLQLGVQVASKYHEQLGTQALVDLFESFKSYEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRIPAVVGGLLDVDCAEDVIKNLIMVVRGQF
STEDLVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELIQVCNENSLFKSEARYLVRRKDPELWASVL
EENNPFRRQLIDQVVQAALSETQDPEEVSVTVKAFMTADLPSELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELYEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQKDLVKEAIDSYIKADDPSSYLEV
VEAANRNGNWEDLVKFLHMARKKARESYVETELVFALAKTNRLSELEEFVNGPNNAHIQQ
VGDRCYEEAMYEAAKLLYNNVSNFARLASTLVHLGEYQAAVDSSRKANSTRTWKEVCFAC
VDGQEFRLAQLCGLHIVIHADELEELISYYQDRGYFEELIALLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIMTMMA
HPTEAWKEGQFKDIITKVANVELYYKALRFYLDYKPLLINDLLLVLSPRLDHTRTVRFFS
KVNQLPLVKPYLRSVQNHNNKGVNEALNNLLTEEEDYQGLRASIDAYDNFDNISLAQRLE
KHQLMEFRRIAAYLYKGNNRWRQSVELCKKDRLYKDAMQYAAESRDAELAESLLHEEAQS
TSSGRTCPGAELTGTLTWEQTGLPGAGFESHLRCSAGRLLDWVPLRDGLVPAWPQGAEGL
GPPSSPRRPHSAQEPSPGAVLGHGGPRARAARLERREMGRGGVGEPPGRGVTLGLLLQVD
KLDASESLRRDEEQGAEPAPIVFGQQLMLTAGPTAAPSQGAFSYGYGAPAFPQAPVYSFN
M
NT seq
5226 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagatactgcccatccgcttccaggagcacttccagcttcagaacctgggcatc
aatcctgccaacattggcttcagcacactgacgatggagtctgacaagttcatctgcatc
cgagagaaggtgggggagcaagcgcaggtggtcatcatcgatatgagcgacccggccgcc
cccatccgccggcccatctctgccgaaagcgccatcatgaacccagcttctaaagtcatc
gccctgaaagcgggaaagaccctccagattttcaatatcgagatgaagagtaaaatgaaa
gcccacacgatggcggaggaggtgactttctggaaatgggtctctgtcaacaccgtcgcc
ttggtgaccgacaccgctgtctaccactggagcatggagggggactctcagcccctgaag
gtgtttgaccgccacgcgagtctggccggctgccagatcatcaactacaggactgacgac
caccagaagtggctgctgcttatcggcatctctgcccagcaaaatcgtgtggttggagca
atgcagctttactcagtggacaggaaggtctctcagccaatagaaggccatgctgcagct
tttgccgagttcaaaatagaagggaactccaagacttccactcttttctgttttgctgta
cggagccctacaggtggcaagctgcacatcattgaggtgggccagcctgcagcagggaac
cagccctttgggaagaaagccctcgatgtgttttttcctccggaggctcagacggatttc
cctgtggctatgcagataggagtcaagcacggggtcatttacttgatcacaaagcacggc
tacattcacatgtacgacttggagtctggcacgtgcatctacatgaaccgcatcagcgcc
gacacggtcttcgtcacggcttcccacgagcccacgtctggcattattggcgtgaacaag
aaaggacaggtcttgtcggtctgcgtggaggaggagaacatcgtcagttacgccaccaac
gtgctccagaacccagacctgggcctgcgcatggccattcgcagcaatctggccggggcc
gaggagctctttgcccggaaatttaacaccctgtttgcgcagggcagctacgccgaagcg
gccaaagtggctgcctctgcgcccaagggggtcctgcgcaccagtgacaccatccgcaag
ttccagagtgtgccggcccaggccggccaggcctcccccctgctccagtactttggcatc
ttgctggaccaagggcagctgaacagatccgagtccttggagctctgccggcccgtgctg
cagcagggccgcaagcagctcctggagaaatggctgaaggaggacaagctggagtgttcc
gaggagctgggagacctggtcaaggccgccgaccccactctggcgctcagcgtctacctc
cgggccagcgtgcccagcaaagtgatccagtgctttgctgagacgggccagttccagaag
atcgtgctctacgccaagaaggttgggtacaccccggactggatcttcttgctgaggagt
gtgatgagggtcagcccagagcagggtctgcagctggcgcaaatgctggtgcaagatgag
gagccgttggccaacattaaccagatcgtggatgtcttcatggagaacagcttgatccag
cagtgcacgtctttcttactggatgccttgaagaacaaccgccccgcagaggggcacctc
cagacccgcctcctggagatgaacctcatccatgccccacaggttgcggatgccatcctt
gggaatcagatgtttacccactatgaccgtgcccacattgcccagctctgtgagaaagca
ggcctgctgcagagggccttggagcactacacggacctgtatgacatcaagcgggccgtg
gtccacactcacctcctgaatcctgagtggctcatcaatttctttggctcactgtcagtg
gaggattctgtggagtgcctgcgagcaatgctgtcggccaacatccgccagaacctccag
ctgggcgtgcaagtggcctccaagtaccatgagcagctgggcacgcaggccctcgtggat
ctctttgagtccttcaagagttatgaaggcctcttttacttcctgggctccattgtcaac
tttagtcaggatcccgacgtgcatttcaaatacatccaggctgcctgcaagactgggcag
atcaaggaggtggagagaatatgccgagaaagcaactgctataacccggagcgggtgaag
aacttccttaaggaggcgaagctcacagaccagcttccgctgattatcgtttgcgacaga
tttgattttgttcatgacctggttctgtatttataccgcaacaacctgcagaagtacatc
gaaatctacgttcagaaggtcaaccccagccgcatcccggccgtggtcggagggctgctc
gatgtggactgtgcagaggacgtcattaaaaacttaatcatggtggtgagggggcagttc
tccaccgaggacctggtggctgaagtggagaaaagaaacaggctaaagctgcttctcccg
tggctggaatcgcgaatccacgaaggctgcgaagagccagccacccacaacgccctcgcc
aagatctatatcgacagtaacaataaccccgagcgcttcctccgcgagaacccctactac
gacagccgcgttgtaggtaaatactgtgaaaagagggacccgcatttggcctgtgttgcc
tatgagagggggcagtgtgacctcgagctcattcaggtttgcaatgagaattctctgttc
aaaagtgaagctcgttacctggttcgcagaaaagacccagaactctgggccagtgtcctg
gaggaaaacaacccgttcaggcgacagctcattgaccaggtggtgcaggccgccctgtct
gagacccaggaccccgaggaggtctccgtgaccgtgaaagccttcatgactgctgacctg
cccagcgagctcatcgagctcctcgagaagatcgtgctggataactctgtgtttagtgag
cacaggaatctccagaatctcctcattctgactgccatcaaggcggaccgcacgcgggtg
atggagtacatcaatcggctggataactatgatgccccggacatcgccaacatcgccatc
agcaacgagctctacgaggaagcctttgccatcttcaggaagtttgatgtgaatacgtcg
gccgttcaggtcctcatagagcacattgggaatctggaccgcgcttatgaatttgcagaa
aggtgcaacgagccggcagtgtggagccagctggccagggcccagctgcagaaagacttg
gtgaaagaggccattgactcttacatcaaagccgatgacccctcctcttacctggaagtg
gtggaggccgccaaccgaaacggtaactgggaagatctggttaaatttctacatatggcc
aggaaaaaggcccgagaatcctacgtcgagactgagctcgtttttgctttggctaaaaca
aaccgcctgtctgagctagaagagtttgtcaatggacccaacaatgcccacatccagcag
gttggtgatcgctgctatgaggaggccatgtacgaagcggccaaattgctctacaataac
gtgtccaattttgcccgcctggcatctaccttggtgcatcttggggaatatcaggctgca
gtggacagcagccgcaaggccaacagcaccaggacctggaaggaggtgtgttttgcctgt
gttgatgggcaggagttccggctggctcagttatgtggcctccatattgtaatccatgct
gacgaacttgaggagctaatcagctactaccaggatcggggctactttgaagaactgatt
gccttgctggaggctgccttgggcctagagcgggctcatatggggatgttcaccgagctt
gccatcctgtattccaaattcaagccccagaagatgcgggagcaccttgagctcttctgg
tccagagtcaatattcccaaggtcctgagagctgccgagcaggctcacctctgggctgag
ctcgtgtttctctacgacaagtacgaggagtacgataatgccatcatgaccatgatggcc
catcccacggaggcctggaaagaagggcagttcaaggacatcatcaccaaggtggccaat
gtggagctgtactacaaagcgctccgcttttacttggattacaaacccctcctgatcaat
gacctcctgctggtgctctcgccccgtctggaccacacccgaactgtccggtttttttca
aaggtgaatcagcttcctctggtgaagccctatctgcgctcagtccaaaatcataataat
aagggggtcaatgaggctcttaacaacctgctgactgaggaagaggattaccagggcttg
agggcctccattgatgcctacgacaacttcgacaacatcagcctggcccagcggctggag
aagcaccaactgatggagttccggcggatcgcggcttatttgtacaaaggaaacaaccgc
tggagacagagcgtggagctctgtaagaaagaccgtctctataaggacgccatgcagtac
gcagccgagtccagggacgccgagctggccgagagccttctgcatgaggaggcccagagc
acgtccagcggccggacctgtcctggggccgagctgaccgggacgcttacgtgggaacag
acagggctgccaggagctgggtttgaatcccaccttcgttgctcagccgggaggctcctg
gactgggttcctctgagggatggtctcgtgcccgcctggccccagggggcagaaggcctt
gggcctccttcctcccccaggaggccccattctgcccaggagccctcaccgggggctgtt
ctcgggcacggaggacccagagctcgggccgcccgccttgagaggcgagagatgggccgg
ggaggggttggggagcccccgggccgcggggtcaccctgggcctgctcctgcaggtggac
aagctggacgcctcggagagcctgcggagggacgaggagcagggggcggagccggcgccc
atcgtgttcggccagcagctgatgctgacggcgggccccactgcggcgccttctcagggc
gccttctcctacggctacggggctccggccttcccccaggcccccgtttacagcttcaac
atgtag
DBGET
integrated database retrieval system
