Monodelphis domestica (gray short-tailed opossum): 100029356
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Entry
100029356 CDS
T01031
Symbol
SHMT1
Name
(RefSeq) serine hydroxymethyltransferase 1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo00260
Glycine, serine and threonine metabolism
mdo00630
Glyoxylate and dicarboxylate metabolism
mdo00670
One carbon pool by folate
mdo01100
Metabolic pathways
mdo01200
Carbon metabolism
mdo01230
Biosynthesis of amino acids
mdo01240
Biosynthesis of cofactors
mdo01523
Antifolate resistance
mdo04981
Folate transport and metabolism
Module
mdo_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
100029356 (SHMT1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
100029356 (SHMT1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
100029356 (SHMT1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
100029356 (SHMT1)
09160 Human Diseases
09176 Drug resistance: antineoplastic
01523 Antifolate resistance
100029356 (SHMT1)
Enzymes [BR:
mdo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
100029356 (SHMT1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SHMT
DUF6906
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
100029356
NCBI-ProteinID:
XP_001379126
Ensembl:
ENSMODG00000013682
UniProt:
A0A5F8HF15
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Position
6:12011215..12040727
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AA seq
484 aa
AA seq
DB search
MASTVNGENHGVNLWESQKNMLTQPLRDNDIEVYTIIKKENHRQKTGLELIASENFASRA
VLEALGSCLNNKYSEGYPGQRYYGGTEFVDELEILCQKRALQAYGLDPQNWGVNVQPYSG
SPGNFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPDTGY
IDYDKLEENARLFHPKLIIAGVSCYSRNLDYARMRKIADSNGAYLMADMAHISGLVAAGV
VPSPFEYCDVVTTTTHKTLRGCRSAMIFFRKGVRSVDPKTGKQTMYNLESLINSAVFPGL
QGGPHNHAIAGVAVALKQALTPEFKAYQQQVVANCKALCAALMELGYHIVTGGSDNHLIL
LDLRSKGTDGGRAEKVLESCSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFHQ
VAQFIHEGIELALRIQRDVGPQATMKEFKEKLAGDAHYQGAVKALRDKVESFATTFPLPG
IPGF
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgacagtcaatggagagaaccatggtgttaatctctgggaatctcaaaaaaat
atgctgacccagccattgagggacaatgatatagaggtgtatacaatcattaagaaggaa
aaccatcgtcaaaagactgggctggaactgattgcttcggagaattttgcaagtcgagca
gttctggaagcattgggttcttgcttgaataataagtactcagagggatacccaggccag
aggtattatggtggtactgagtttgtggatgaattggagattctgtgtcagaagagggct
ctgcaggcctatggcctggacccacaaaactggggcgtcaatgttcagccatattcagga
tctcctgggaattttgcggtgtacacagccctagtggaaccacatgggaggattatgggt
ctagacctgcctgatgggggtcacctcacccacggattcatgacagacaagaagaaaatc
tctgccacctccatcttttttgagtccatgccctacaaggtaaacccagatactggctat
attgactatgacaaactagaagaaaatgcccgactcttccaccccaaactgatcattgca
ggagtcagctgctattccaggaacctggactatgcccgcatgcggaagattgcagacagt
aatggagcctacctcatggctgacatggcccacatcagtggactagtggccgccggcgtg
gtcccctccccctttgaatactgtgacgtggtgaccaccaccacacacaagacccttcga
ggctgtcgctctgccatgatcttctttaggaaaggagtgcgcagtgtggaccccaagaca
ggcaaacagacgatgtacaatctggagtcactcattaattcagctgttttcccaggccta
cagggagggcctcacaaccatgccatcgcaggagttgctgtagccctgaagcaagccttg
acccctgaatttaaggcttatcagcaacaggtggtggccaactgcaaagccctgtgtgca
gccctgatggagctgggttaccacatagtaactggtggttctgacaaccacttgattctt
ttggatctacgcagcaaaggcactgatggaggaagagctgagaaggtgctagaaagttgc
tctattgcttgtaacaagaacacctgcccaggagacaaaagtgcattaagacccagtgga
ctgaggctgggaaccccagctctgacctcccgaggactgctagaaaaagatttccaccaa
gtggcccaatttattcatgaaggaatagaactggcgctgcggatccagagggacgtcggg
cctcaggccaccatgaaggaattcaaggagaaactggccggggacgcgcactaccagggc
gctgtgaaggccctcagagacaaggtggagagctttgccaccacattccctctgcccgga
atccctggcttttaa
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