Monodelphis domestica (gray short-tailed opossum): 100029360
Help
Entry
100029360 CDS
T01031
Symbol
TAF5L
Name
(RefSeq) TATA-box binding protein associated factor 5 like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100029360 (TAF5L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdo03021
]
100029360 (TAF5L)
03036 Chromosome and associated proteins [BR:
mdo03036
]
100029360 (TAF5L)
Transcription machinery [BR:
mdo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100029360 (TAF5L)
Coactivators
SAGA/TFTC/STAGA complex
100029360 (TAF5L)
Chromosome and associated proteins [BR:
mdo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
100029360 (TAF5L)
STAGA complex
100029360 (TAF5L)
TFTC complex
100029360 (TAF5L)
SAGA complex
100029360 (TAF5L)
SLIK complex
100029360 (TAF5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
TFIID_NTD2
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_EIPR1
WD40_RFWD3
PEP5_VPS11_N
Ge1_WD40
PROPPIN
Beta-prop_IP5PC_F
eIF2A
Beta-prop_NWD2_C
WD_LRWD1
Nbas_N
Mala_s_1-like
Motif
Other DBs
NCBI-GeneID:
100029360
NCBI-ProteinID:
XP_001379129
LinkDB
All DBs
Position
2:complement(161762355..161796520)
Genome browser
AA seq
589 aa
AA seq
DB search
MKRVRTEQIQMAVSCYLKRRQYVDSEGPLKQGLRLSQTPEEMAANLTVQSESGCANIVSA
APCQAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLHMVQNGLKSTVDSFY
SRFHGMFLQNASQKDVIEQLQTTLTIQDILSNFRLRAFLDNKYVVRLQEDSYNYLIRYLQ
SDNNSALCKVLTLHIHLDVQPAKRTDYQLYASGSSSRSESNGLEPADMPTSILQNEAALD
VLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPDNKLLAAGFDNSCVKLWSLRSK
KLKSEPHQVDVSRIRLACDVLDEEEDDDDNVGTEMKILRGHCGPVYSTRFLSDSSGLLSC
SEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPCSLYFASGSHDRTARLWSFDRTYPLR
IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNG
KYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIR
NTYCNAPADGSSSELVGVYTGQMSNVLSVQFMACNLLLVTGITQENQEH
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgagtacgcacagaacagattcagatggcagtatcctgctacctcaaacgacgc
caatatgtagattcagaaggccctctaaaacaaggattgcggttgtctcagactcctgaa
gagatggcagctaatctcacagtccaatcagagtctggttgtgccaacatagtatctgca
gccccctgccaggctgagcctcagcaatatgaagtacagtttggacgattacggaatttt
ctcactgattctgattcccagcacagccatgaagtgatgcctctcctatatcctctcttt
gtctacctccatcttcacatggtccagaatggcctgaagagcacagtggacagtttttat
agccgcttccatggaatgtttttgcagaacgccagccagaaggatgtcattgagcagcta
cagaccactctgaccattcaggacatcctgtccaacttcagactccgggcattcctggat
aataagtatgtggtccgcctccaagaggacagctacaattaccttatccgctacctccaa
agtgacaacaacagtgccctgtgcaaagttctcaccttacacattcatcttgatgtgcag
cctgccaagagaacagactaccagctgtatgccagtggcagctcctcacgaagtgagagc
aatggcctggagccagcagatatgcccacatctattttgcagaatgaggctgctctggat
gtcctgcaagagagcattaagcgagtcaaggatggacccccttcacttaccacaatttgt
ttctatgccttctataacactgagcaattgctgaacactgcagaaatctccccagacaac
aagctgctagctgctgggtttgataattcctgtgtaaaactttggagcttgagatccaag
aagttaaaatcagagcctcatcaggtggacgtgtctcgcatccgcttggcttgcgatgtt
ctggatgaagaggaagatgatgatgacaacgtgggcacagaaatgaagatcttgagaggg
cattgtgggcccgtgtacagtacaaggttcctatcagacagctcagggttgctatcttgc
tccgaagatatgtctattagatactgggaccttggaagttttaccaatactgtattgtac
caaggccatgcctaccctgtctgggatctggatatcagtccatgcagcctatatttcgcc
agtggttcccatgaccgcactgcaagactctggtcatttgatcggacgtacccattgcga
atatatgcaggacatctagcagatgtggactgtgtaaaattccacccgaattcaaactac
ttagctacgggctcaactgataaaactgttcgtttatggagtactcaacaaggaaattct
gtgaggctcttcacaggtcatcggggtcctgtgctttcacttgcattttctccaaatggt
aagtacttggcatctgccggtgaggaccagcggttgaagctatgggacttggcatctggt
accctctacaaagaattgagaggccacacggacaatatcaccagccttactttcagccca
gatagtagcttgattgcctctgcatccatggataactctgttcgggtttgggatattcgg
aacacttattgcaatgctcctgcagatggttcttccagtgaacttgttggtgtctatact
gggcagatgagtaatgtactgagtgttcagtttatggcctgtaacctccttctagtgact
ggaattacacaagaaaatcaggaacattaa
DBGET
integrated database retrieval system
