Monodelphis domestica (gray short-tailed opossum): 100029539
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Entry
100029539 CDS
T01031
Symbol
APEX1
Name
(RefSeq) apurinic/apyrimidinic endodeoxyribonuclease 1
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
100029539 (APEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdo03400
]
100029539 (APEX1)
Enzymes [BR:
mdo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
100029539 (APEX1)
DNA repair and recombination proteins [BR:
mdo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
100029539 (APEX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
100029539
NCBI-ProteinID:
XP_001379263
Ensembl:
ENSMODG00000007125
UniProt:
F6SH72
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All DBs
Position
1:168714719..168717162
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AA seq
320 aa
AA seq
DB search
MPKRGKKELSVKDGINEEESETNEPEPKKTKKGAKEKASTGEGSALYEDPPDKKTSPSGK
SSTLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSESKLPPELQDLPGLTYQY
WSSPSDKEGYSGVGLLSRQCPLSVTYGIGEEEHDQEGRVIVAEFEAFVLVTAYVPNAGRG
LVRLEYRQRWDEAFRKFLKGLSAKKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQ
GFGELLQAVPLTDSFRHLYPEAAYAYTFWTYMMNARAKNVGWRLDYFLLSQALLPALCDS
KIRSKALGSDHCPITLLLAL
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagcgagggaagaaggaattatcggtgaaggatggcatcaatgaggaggagtca
gagactaacgaacctgaacctaagaagactaagaagggtgcaaaagagaaggcctcaaca
ggagaaggatctgccttgtatgaggaccccccagacaagaaaacctcacctagtggcaaa
tcttctaccctcaagatttgctcttggaatgtggatgggctccgagcctggatcaaaaaa
aagggtttggattgggtaaaggaagaagcccctgacatcctttgcctccaagagaccaaa
tgttcagagagcaagttgccacctgagcttcaggatctgcctggtcttacctaccagtac
tggtcctcgcccagtgataaagaaggatacagtggcgtgggtctcctttcccgccagtgc
ccactcagtgtcacctatggcattggtgaagaggagcatgatcaggagggtcgggtaata
gtggctgagtttgaggcatttgtgctggtgacagcctatgtgcccaatgcaggacggggg
ctggttcgtctggaataccgacaacgatgggatgaagcatttcgcaagtttttgaagggg
ctaagtgccaaaaagccacttgtgctctgtggagacctcaatgtggcccatgaagagatt
gacttgcgcaatcccaaagggaacaagaaaaatgctggttttactccacaggaaagacaa
ggttttggggaactactccaggcagtgccactaactgatagtttccgtcatctctatcca
gaggcagcttatgcttatactttttggacctacatgatgaatgcccgagccaagaatgtt
ggctggcggcttgactacttcttattgtcccaggccctactccctgccctgtgtgatagc
aagattcggtccaaagccctaggtagtgaccattgtcccatcaccctcttgctggcattg
taa
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integrated database retrieval system
