Monodelphis domestica (gray short-tailed opossum): 100029698
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Entry
100029698 CDS
T01031
Symbol
NCSTN
Name
(RefSeq) nicastrin
KO
K06171
nicastrin
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04330
Notch signaling pathway
mdo05010
Alzheimer disease
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
100029698 (NCSTN)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
100029698 (NCSTN)
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Gene cluster
GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
100029698
NCBI-ProteinID:
XP_001379384
Ensembl:
ENSMODG00000009496
UniProt:
F7F9Y3
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All DBs
Position
2:complement(165341733..165363841)
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AA seq
723 aa
AA seq
DB search
MSGWRGQEAEATRRGKMATAGGGGGVASRGRRACLLLCFVPLLAGLCQANSVERKIYIPL
NRTAPCVRLLNATHQIGCQSSISGDTGVIHVVEEEEDLEWVLTEGPNPPYMVLLEGNLFT
RKVMEKLKGTIRISGLAVALAKPSPEDGFSPSLECPNDGFGIYSNSYGSEYAHCKEGNWN
QLGNGLAYEDFDFPIFLLEDENETQVIKQCYWDHNRGVNGSAPTYPLCAMQLFSHMHAVT
STVTCMRRSAIQSTFSINPEVVCDPLADFNVWNTLNPLNISGTLEPGDKVIIAATKLDSR
SFFWNVAPGAESAVGSFVTQLAAAEALQKAPDVATLPRNVMFVFFQGETFDYIGSSRMVY
DMEKGKFPVLLENIHSFVELGQVALRNSSDLWMHTDPMSQRDESIRMEVQNLLTILRNSS
IGVPNVTMQDVNPPRSLPPSSLQRFLRGQNISGVVLTDYSHSFSNRYYQSIYDTPENIGL
KYPASLKPDEAMDFVTDTAKSLAAVATVLGRALYQLAGGTNYTAVEADPKTVSRLLYGFL
VKANNSWFQSVIKQDLKVFLGDGPLQHYIAVSSPINTTYVVQYVLANLTGTVVNLTREEC
QDPKKTQDANKDLYEYAWVQGPVDPSGTSRLSQCVRSTARLVKAVSPAFELQQWESSEYS
TWTESRWKDIRARIFLVASKELEFVTLIVGLSILFVSLIITYFINAKADILFTTPREPGA
VSY
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggctggagggggcaggaggcggaagcgacccggagaggcaagatggccactgct
gggggtggcggaggagttgcctccaggggccgacgagcctgccttctcctttgcttcgtt
cctttgctagcaggtttgtgccaagcaaattctgtggagaggaagatctacatccctttg
aacagaacagctccctgtgtccgcctgctcaatgccactcaccagattggttgccagtct
tccattagtggggacacaggagtaatccacgtagtcgaagaggaggaagacctggagtgg
gttttaactgaaggccctaatccaccctacatggtactgctggaaggcaacctttttaca
aggaaagtgatggagaagctgaagggaaccatacgaatctctggtcttgctgtggctctt
gccaaacccagtcctgaagatggtttctctcccagccttgaatgccctaatgatggcttt
ggtatctactctaactcttatgggtcagagtatgcccactgcaaagaaggaaattggaac
caacttggcaatgggttagcctatgaagattttgacttccccatctttctgctagaagat
gagaatgaaacacaggttatcaagcagtgttattgggatcacaaccggggagtgaatgga
tctgcccctacctacccactgtgtgcaatgcagcttttctcacacatgcatgctgtcacc
agcacagtcacttgcatgcggcgcagtgccatccaaagcacattcagcatcaacccagaa
gttgtctgtgaccccctggctgacttcaacgtgtggaatacattgaatcctttgaatata
tctgggacgttagagcctggggacaaggtcatcatcgctgccaccaagttggacagtcga
tcattcttctggaatgtggctcctggggctgagagtgctgttggttctttcgtcacccag
ctggctgcagctgaagcactgcagaaggcaccagatgtggcaactctgccccggaatgtt
atgtttgttttcttccaaggggagacttttgactacattggtagctcacgaatggtgtat
gacatggaaaagggcaaatttcctgtcctgctggagaatatacattcatttgtggaactt
ggacaggtagccttacggaattcttcagatttgtggatgcatacagaccctatgtcacag
agagatgaatccattcgtatggaggtccagaatctcctgactatattgaggaacagcagc
attggtgtccctaatgttacaatgcaagatgtgaacccaccacgttctcttccaccatcc
tcactacagaggtttctccgtggccaaaacatctctggggttgtgcttactgattattct
cactccttttccaacaggtattaccagagcatctatgataccccagagaacattggtctg
aagtatcctgcaagcctgaagcctgatgaggccatggattttgtgactgatacagccaag
tccttggcagctgtggccacagtgctgggccgtgcactataccagctagcagggggaacc
aactacaccgctgttgaggctgatccaaaaacggtttctcgcttgctctatgggttcctg
gttaaagccaacaactcgtggttccagtcagttatcaagcaggatctgaaggtcttcctg
ggagatgggcccctccagcattacattgccgtttccagccccatcaataccacctatgtg
gtgcagtatgtactggcaaacttgactggcactgtggtcaaccttacccgggaggagtgc
caagatccaaagaagactcaagatgcaaacaaggatttgtacgagtatgcatgggtacaa
ggccctgtggaccccagtgggacaagtagactctctcagtgtgtgcgctccacagcaaga
cttgtcaaggctgtgtctcctgcttttgagctgcagcagtgggaatcctctgaatattct
acttggacagaaagccgctggaaagacatccgtgcccgcatttttcttgtagctagcaag
gagcttgagtttgtcaccctgattgtgggcctcagcatcctctttgtctctctcatcatt
acctacttcatcaatgccaaagctgatatcctgttcaccacccctcgagaaccaggagct
gtgtcttactga
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