Monodelphis domestica (gray short-tailed opossum): 100030071
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Entry
100030071 CDS
T01031
Symbol
THOC2
Name
(RefSeq) THO complex 2
KO
K12879
THO complex subunit 2
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03013
Nucleocytoplasmic transport
mdo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100030071 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
100030071 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdo03019
]
100030071 (THOC2)
03041 Spliceosome [BR:
mdo03041
]
100030071 (THOC2)
Messenger RNA biogenesis [BR:
mdo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
100030071 (THOC2)
Spliceosome [BR:
mdo03041
]
Complex C
Other components
EJC/TREX
100030071 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100030071 (THOC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
100030071
NCBI-ProteinID:
XP_001379672
Ensembl:
ENSMODG00000014984
LinkDB
All DBs
Position
X:complement(17318751..17489472)
Genome browser
AA seq
1690 aa
AA seq
DB search
MHACRTTLEAMFPPQVPLGLGDTEGGGARGGATTAGPAEPLCFRPLFFPARSRRCAKPEN
LGSEPRSLARARAPSPGGAAEGGAPRERKMAAAAATSGQTSVVPYEWIKNWEKVGKLEYV
QLCRALCENKNREHLIFRDLQQVIYELSYHVIRGTLKPEQASNALSDIIDYREDMPSILA
DVFCILDIETSCLEEKSKRDHFTQLVLSCLYLVSDTILKERLDPETLESLGLIKQSQQFN
QKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDLSGSITSDLILENIKSLIGCFNL
DPNRVLDVILEVYECRPEYDEFFVPLIESYMYMCEPQTLCHILGFKFKFYQEPNGETPSS
LYRVAAILLQYDLIDLDDLYVHLLPVDNTILDEHKQEIVEAKQIVRKLTMLVLSSEKMDE
RDKEKEKEEEKTDKPPDNQKLGLLEALLKISDWQHAQNIMDQMPPFYASSHRPIAIALCQ
LIHVTIDPLYRRVGVPKGAKGSIVALLQNKRAPKQAESFEDMKKEVFDMLCHLGPHLSHD
PILFAKVVRLGKAFMKEFQADGSKQEEKERMEILLSCLLTITDEVLLPSLSLMDCNACMS
EELWGMFKSFPYQYRYRLYGQWKNETYNSHPLLVKVKAQTIDRAKYIMKRLTKENVKPSG
RQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDSLKYLTSLNYDVLAYCIIEALANPEK
ERMKHDDTTISSWLQSLASFCGAVFRKYPIELAGLLQYVANQLKAGKSFDLLILKEVVQK
MAGIEITEEITMEQLEAMTGGEQLKAEGGYFGQIRNTKKSSQRLKDALLDHDLALPLCLL
MAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQFGGFLASNLSTEDYIKRVPSIDVLCN
EFHTPHDAAFFLSRPMYAHHISSKYDELKKAEKGSKQQHKVHKYITSCELVMAPVHEAVV
SLHLPKVWDDISPQFYATFWSLTMYDLAVPRNSYEREVNKLKVQMKAVDDNQEMPPNKKK
KEKERCTALQDKLLEEEKKQIEHVQRVLQRLKLEKDNWLLAKSTKNETITKFLQLCIFPR
CIFSAIDAVYCARFVELVHQQKTLNFSTLLCYDRVFSDIIYTVASCTENESSRYGRFLCC
MLETVTRWHSDRAIYEKECGNYPGFLTILRATGFDGGNKADQLDYENFRHVVHKWHYKLT
KASVHCLETGEYTHIRNILIVLTKILPWYPKVLNLGQALERRVHKICQEEKEKRPDLYAL
AMGYSGQLKSRKPYMIPENEFHHKDPPPRNAVAATVQNGPGGVGLSTSLTINAAKLEEST
TEETDKGKEKSQGAVKIANKAANSTPKATPNNGNNASNSKVTKENDKDKSGKEKDRDKKE
KTPAATPEAKALGKDGKEKPKEERPNKDDKAKEIKEKTPKSDKEKEKFKKDEKSSKDEKF
KTVVTTTESKSAVEKERDKEPSREKDVAKETKSKENNKGGEKTPVAGSLKSPVPRSETSE
SEREQKRRKLDSHSSPSHSSTVKDNLSELKESSTKHYINHTTPILSKSKEREMEKKDLDK
LRERSREREKKEDKDRKERKRDHSNNDREVSQDSTKRRKEENGTTGASKHSKSESPSDSP
RSNEKEKNKSKSSGKDKGTDSIKMDKMEKSSSGSKKDSRHDKEKTEKKEKRDSTGGKEEK
KHHKSSDKHR
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcgtgccgtacgacgctcgaggctatgttcccaccacaagttcccctggggcta
ggagacacagagggaggcggggcaaggggtggggcgacgaccgcgggacccgcggaacct
ctctgctttcgccctctctttttcccagcgcgctcccgccgctgtgcaaaaccggagaat
ttaggctcggagccgcgctcgctcgctcgtgcgcgcgcgccctcgccgggaggagcggct
gagggcggagctcctcgagagaggaagatggcggcggcggcggcgacgagcggacagact
tcggtggttccctacgagtggataaaaaactgggagaaagtgggcaagctggaatatgtg
cagctatgtcgagccctctgtgaaaataaaaaccgtgaacatttgattttcagagatctc
cagcaagttatctatgagctatcatatcatgttataaggggaactctaaagcctgaacaa
gcatcaaatgctctcagtgacattattgactatcgtgaggatatgccctccatcctagct
gatgtattctgcatcttagatattgagacaagttgtttagaagaaaaaagcaaaagagac
cattttacacagttggtgttatcctgtttgtatttagtttcagacacaatcctaaaggaa
cgtttggatccagaaaccttggaatctttaggacttattaagcagtcgcaacaattcaac
caaaaatctgttaaaatcaagacaaaactattttataagcagcaaaaattcaacctctta
agagaagagaatgaaggttatgcaaaattgattgcagaattggggcaggatttgtctgga
agtattactagtgacttaatcttagaaaatatcaaatctttaataggatgttttaatctg
gacccgaacagagttctggatgtcattttagaagtctatgaatgcagaccagaatatgat
gagttctttgtacctttaatagaatcctatatgtatatgtgtgaacctcaaacactatgt
catattcttggattcaaatttaagttttatcaggaaccaaatggagaaacaccatcatct
ttatacagagttgcagcaatacttctgcagtatgatcttattgatttagacgatctttat
gttcatcttcttccagtggataataccattctcgatgaacacaaacaagaaattgtggaa
gccaagcaaattgttagaaaacttaccatgcttgtcttgtcttctgaaaagatggatgag
agagacaaagaaaaggaaaaagaggaggagaaaacagataagccacctgacaaccagaaa
cttggtttattggaagctctgttaaagattagtgattggcaacatgcacaaaacattatg
gatcagatgcccccattttatgcttcttcacacaggccaatagccattgctctttgccag
cttatccatgttactattgaccccctctaccgaagagttggtgtacctaaaggtgctaaa
ggatcaattgttgctctgttgcaaaacaagcgagcaccaaaacaggcagagagttttgaa
gatatgaagaaagaagtattcgatatgctctgtcatcttggtcctcacctttctcatgat
cccattttgtttgccaaagtggtgcgcttagggaaagcatttatgaaagagtttcaggct
gatggaagcaaacaagaagaaaaagagagaatggaaattttgcttagctgtttgctgact
attacagatgaggtgctacttccttctctttctttgatggattgcaatgcttgtatgtct
gaagaactatggggaatgttcaaatcatttccatatcaatacaggtatcgtctgtatggt
cagtggaagaacgaaacttataatagtcatccacttttggtaaaagttaaagctcaaaca
atagatagagccaaatatataatgaagcgattgacaaaagaaaatgtgaagccttctgga
agacaaattgggaaattgagccacagcaacccaaccattttgtttgattacattttatca
caaatacagaagtatgataacttaataacaccagtagtagactcattgaaatacctcact
tcattgaactatgatgtcttggcctattgcatcattgaagctttggctaatccagagaag
gaaaggatgaaacatgatgacacaaccatctcaagctggcttcagagtctagcaagtttt
tgtggtgccgtttttcgtaaatatccaattgaacttgctggtcttcttcagtatgtggca
aatcagctaaaagcaggaaaaagctttgacctacttattttgaaagaggtggtacaaaaa
atggcaggaattgaaataactgaagaaataacaatggagcagctagaggccatgactggt
ggggaacaacttaaagctgagggtggctactttggacagatcagaaacactaaaaaatcc
tctcagaggctaaaggatgcattattggaccatgatcttgctcttcctctatgtttgctt
atggctcaacagagaaatggtgtcatttttcaggaaggaggagagaaacacttaaagctg
gtgggaaaattatatgaccagtgtcatgatactctggtacagtttggtggctttttagca
tctaatttaagcacagaggattatataaagagagtgccttcaattgatgtgctttgtaat
gagttccacacacctcatgatgcagcatttttcctgtctaggcctatgtatgcacaccat
atttcatcaaagtatgatgaacttaaaaaagctgagaagggaagtaagcagcaacataaa
gttcataaatatatcacatcatgtgagttagtgatggctccagtccatgaggcagtggtc
tccttgcatttgccaaaagtatgggatgacatcagccctcagttctatgccacattttgg
tcattgacaatgtatgaccttgcagttccacgtaacagctatgaaagagaagtcaataaa
ttgaaagtccagatgaaagcagttgatgacaatcaggagatgcctccaaataaaaagaaa
aaagagaaggaacgttgtactgcccttcaggacaagcttctcgaagaagagaaaaaacag
atagaacatgtccagagagttctgcagagactaaagctggaaaaagataactggctttta
gcaaaatctacaaaaaatgagaccatcacaaaatttctacagttgtgtatatttcctcgc
tgcattttttcagcaattgatgctgtttactgtgctcgttttgtagaattggtgcatcag
cagaaaactcttaatttttccacacttttgtgctatgatagagttttctctgatataatt
tatacagtagcaagctgtactgaaaatgaaagtagtcgctatggaagattcctctgctgc
atgttagaaactgtgacaaggtggcatagtgatagagcaatatatgaaaaggaatgtgga
aactatccaggcttccttacaattttacgggcaactggatttgatggtggaaacaaagct
gatcagttagactatgagaattttcggcatgtggtgcacaagtggcattataaactaaca
aaggcatctgtgcattgtcttgaaacgggtgaatatactcacatcaggaacattcttatc
gtgctgaccaaaatacttccttggtatcccaaagttttgaacctgggccaggctttggaa
cgaagagtacataaaatctgtcaagaagaaaaagagaagagacctgacctatatgcattg
gctatgggctattctgggcagttgaaaagtagaaagccatacatgatacctgaaaatgaa
ttccaccacaaagatcctcccccaaggaatgctgttgctgccactgtacaaaatgggccc
ggtggtgttggcctatctacatcactcacaataaatgcagctaaattggaagaaagcact
actgaggagactgataaaggaaaggagaagtctcagggtgctgtgaaaattgccaataaa
gctgccaattcaacaccaaaagcgactccaaataacgggaacaatgcttctaatagcaaa
gtgactaaagaaaatgacaaagacaaaagtgggaaagaaaaagacagagataaaaaagaa
aagactccagctgccactccagaggccaaggcacttggtaaagatggtaaagaaaaacca
aaggaagagcggccaaacaaagatgataaggcaaaagagatcaaggaaaaaacacccaaa
tctgacaaggagaaggaaaaattcaagaaggatgaaaaatcttctaaagatgaaaaattc
aagacagttgttaccaccactgaatcaaaatcagctgtagaaaaggaaagagacaaggaa
ccatccagagagaaagatgtagcgaaggaaacgaaatccaaggaaaataataaaggagga
gaaaagacaccagttgctgggtccttgaagtcacctgttccccgatcagaaacatcagag
tctgaaagggaacaaaaacgccgcaaacttgatagccactcttctccatcacattcctca
acagtaaaggacaacctcagcgagctcaaggagtcatcgacaaagcactacattaatcac
actactccaatactgtccaagagtaaggagagagaaatggaaaagaaagatttggacaag
ttaagggaaagatccagagagagagagaagaaagaggacaaggacaggaaagagcggaaa
agggatcattcaaacaatgaccgtgaagtgtcccaggactccaccaagaggcgtaaagag
gaaaatggaacaactggtgcttcaaaacatagtaaaagtgaaagtccatcagattctcct
cgttcaaatgagaaggaaaaaaacaaatctaagtcttcaggcaaagacaaaggcaccgat
tccattaaaatggacaaaatggagaaaagctcttctggtagcaaaaaggattctcggcat
gataaggaaaaaacagagaaaaaagagaaacgggacagtacaggaggaaaggaggagaag
aagcatcataagtcttcagacaagcacagataa
DBGET
integrated database retrieval system
