Monodelphis domestica (gray short-tailed opossum): 100030119
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Entry
100030119 CDS
T01031
Symbol
SOX17
Name
(RefSeq) SRY-box 17
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
100030119 (SOX17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdo03000
]
100030119 (SOX17)
Transcription factors [BR:
mdo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100030119 (SOX17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
100030119
NCBI-ProteinID:
XP_001379706
Ensembl:
ENSMODG00000009348
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All DBs
Position
3:complement(186033166..186035633)
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AA seq
410 aa
AA seq
DB search
MSSPDAGYASDDQSQARCTLPMMMAGMGPCPWAESLSPLGEMKVKSESGSGPGTGGSGTV
AAVGTSGRGKGESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALSLAE
KRPFVEEAERLRVQHMQDHPNYKYRPRRRKQVKRLKRVESGFLHGLPEQPGSGLGPEGRV
CVDSLGLPFHEQAYHQGQGVLPPQMGHYRDCQNLGPAPPQFDSYNLPTPEASPMDGMEPD
AAFFTSSLQGDCQTVPYSYPVSSEYSVHAEPHSGPMHHRHMQEPMAHSLQGLMGASNPLH
MYYGPMGSPQAGGSVRGFQMQHQSGSSQPSPPPEALTCRDGLDGNQPAELLAEEDRTEFE
QYLHFVCKPELGLSYQGHDSSLPLPDNHGAISSVVSNASSAVYYCNYPDG
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcccggatgcggggtacgccagtgacgaccagagccaggccaggtgtacgctg
cccatgatgatggccgggatgggcccctgcccttgggcagagtctctgagcccccttggg
gagatgaaggtcaagagcgagtccgggtcgggccctgggaccgggggcagcgggaccgtt
gcagctgtgggcacttctggccgcggtaaaggggagtcccgcatccggcggcccatgaac
gcgtttatggtttgggccaaggacgagcgcaagcgtctggcgcagcagaatcccgacctg
cacaatgccgaactgagcaagatgttggggaagtcctggaaggctttatctctggctgag
aagaggccctttgtggaggaggctgagcgactacgtgtccagcacatgcaggaccacccc
aattacaaataccgacctcggaggaggaagcaggtgaagagactgaaaagagtggagagc
ggcttcctccatggtctccccgagcagcccggctccggcctgggtccagagggcagagtg
tgtgtggacagcttgggactgccatttcatgagcaggcctaccaccaaggtcagggagtg
ctccctcctcagatgggccactaccgggactgccagaacctgggtccagctccccctcag
tttgacagctacaatctgcctacccctgaggcttctcccatggatggcatggaaccagat
gcagctttcttcacctcttctcttcaaggagactgccagacagtgccctacagctatcct
gtgtcctctgagtactctgtgcatgctgagcctcactcgggtcctatgcaccacagacac
atgcaggaacctatggcccactcgttgcagggtctgatgggcgcctccaaccctctgcat
atgtattatggtcccatgggctctccccaggctgggggcagtgtccgaggcttccagatg
cagcatcagtcaggatctagtcagccctctcctcctccagaggctctgacctgtagggat
ggcctggatggcaaccagcctgctgagcttcttgcagaggaggaccgtacagaatttgaa
caatatctgcactttgtgtgcaaaccagaattggggctaagttaccagggacatgactct
agcctccctttacctgacaatcatggggccatttcctctgttgtgtctaatgccagttct
gcagtatattactgcaactatccagatgggtga
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