Monodelphis domestica (gray short-tailed opossum): 100030148
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Entry
100030148 CDS
T01031
Symbol
POLB
Name
(RefSeq) DNA polymerase beta
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03410
Base excision repair
mdo05166
Human T-cell leukemia virus 1 infection
mdo05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
100030148 (POLB)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100030148 (POLB)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
100030148 (POLB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdo03400
]
100030148 (POLB)
Enzymes [BR:
mdo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
100030148 (POLB)
DNA repair and recombination proteins [BR:
mdo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
100030148 (POLB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
100030148 (POLB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_5
NTP_transf_2
HHH_2
Cdd1
Motif
Other DBs
NCBI-GeneID:
100030148
NCBI-ProteinID:
XP_001373104
Ensembl:
ENSMODG00000010196
UniProt:
F6STA6
LinkDB
All DBs
Position
1:577871126..577902889
Genome browser
AA seq
335 aa
AA seq
DB search
MSKRKAPQETLNAGITDFLTELANYERNVNQAIHKYNAYRKAASVIAKYPTKIKSGAEAK
KLDGVGAKIAEKIDEFLSTGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIK
TLEDLRKNENKLNHHQRIGLRYFDDFEKRIPREEMLQMQDIVLNEVKKVDPKYIATVCGS
FRRGAESSGDMDILLTHPSFTSESAKQPKLLHQVVEQLQKVHFITDTLSKGDTKFMGVCQ
LSSEDDEDPYPYRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEMGFTINEYTIRP
LGVTGVAGEPLPVDSEKDIFDYIQWKYREPKDRSE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacggaaggcgccgcaggagaccctcaacgcgggcatcacggacttcctgaca
gagcttgcaaactatgagaggaatgtgaaccaagcaatccataaatacaatgcttacaga
aaagcagcttcagtaatagccaaatacccaaccaaaataaagagtggagcagaagcaaag
aaactggatggagtaggagcaaaaattgctgagaagattgatgagtttttatctactgga
aaattacgtaaactagaaaagattaggcaggatgatacaagttcatccatcaatttcctg
acacgagttagtggtattgggccatctgctgcaagaaagtttgtagatgaaggaattaaa
acattggaagatcttaggaaaaatgaaaacaaattgaatcatcatcagcgaattggacta
agatattttgatgattttgagaagagaattcccagggaggagatgttgcaaatgcaagac
attgtattgaatgaagttaaaaaagttgatccaaaatatattgccacagtctgtggaagt
ttccgacgaggtgcagagtcaagtggagacatggatattctcctcacccatcctagtttc
acttctgagtcagctaaacagcccaagctattgcatcaagttgttgaacaactacagaaa
gtccacttcatcacagatactttgtcaaaaggggacacaaagtttatgggtgtttgtcag
ctgtcaagtgaggatgatgaagatccatatccatacagaagaattgatatcagattgatt
cccaaggatcagtattattgtggtgttctctactttactggcagcgatattttcaataag
aatatgagggcccatgccctagaaatgggctttacaatcaatgagtatacgatccggcct
ttgggagtcactggagttgctggagaaccccttccagtggacagtgagaaagacatcttt
gactatatccagtggaaataccgagaacccaaggacagaagcgagtga
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