Monodelphis domestica (gray short-tailed opossum): 100030178
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Entry
100030178 CDS
T01031
Symbol
DDX56
Name
(RefSeq) DEAD-box helicase 56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mdo03009
]
100030178 (DDX56)
Enzymes [BR:
mdo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100030178 (DDX56)
Ribosome biogenesis [BR:
mdo03009
]
Eukaryotic type
Pre-60S particles
Helicases
100030178 (DDX56)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
100030178
NCBI-ProteinID:
XP_007475931
Ensembl:
ENSMODG00000016137
LinkDB
All DBs
Position
1:complement(502357967..502375045)
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AA seq
539 aa
AA seq
DB search
MADSEVLGFQHMGLDQRLLQAIAEQGWARPTLIQEKAIPLALEGKDLLARARTGSGKTAA
YAIPLLQHLLHRKATGPVVEQAIRGLVLVPTKELARQAQTMIRQLTAYCSRDVRVVDVSA
SEDFAFQRWVKEIHLVMKHXGXXWSTHFPVFNSFGFYILHIMEPDSSMLFCSHLPRIYQA
FLMSATFNEDVQALKELVLHNPVTLKLQESQLPGPDQLQQFQVVCETEEDKFLLLYALLK
LSLLRGKSLLFVNTLERGYRLRLFLEQFSIPACVLNGELPLRSRCHIISQFNQGFYDCVI
ATDEEVLGAPFKGKRRGQGSKGERASDTESGVARGIDFHNVTAVLNFDLPPSPEAYIHRA
GRTARANNPGTALTFVLPTERPQLKEIEEALGGESAESMFLPYQFRMEEIEGFRYRCRDA
MRSVTKQAIREARLKEIKEELLHSEKLKTYFEDNPRDLQLLRHDRPLHPAVVKPHLGHVP
DYLVPPTLRGIARPHSKRKRNRPFTSLRKLKTPRTQNPLRNFKYTRKKPRTSAPSAKHS
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcggattctgaggtgcttggcttccagcacatgggactggaccaaaggctcttgcag
gccatcgcagagcagggttgggcccgacccacgcttatccaagagaaggcaattccactg
gctttggaggggaaggacctcttggcccgggctcggaccggttcagggaagaccgccgct
tatgccatcccgctcctgcagcatctgcttcataggaaggcgacaggaccagttgtggaa
caggctattcgaggccttgttcttgtacccaccaaggagttggcacgacaggcacagacc
atgatccgtcagctgacagcatattgttcccgggatgttcgtgtggttgatgtgtcagct
tcagaggactttgcttttcaaaggtgggtgaaagaaattcatctagtgatgaagcattaa
gggtaataatggagcactcacttcccagtctttaattcctttggtttttatattttgcat
ataatggaacccgactcttctatgcttttctgcagtcacttgccccggatataccaggcc
ttcctcatgtctgctacttttaatgaagatgtacaggcccttaaggagcttgtgctgcat
aacccggtaacgctgaagttgcaagaatctcagcttccaggaccagatcagctgcagcag
tttcaagttgtttgtgagaccgaggaggacaaattccttttactctatgctctgctaaaa
ctgtctttattgcggggcaaatcactactctttgttaacactttagaacgtggttaccgc
cttcgacttttcctggagcagttcagcattcctgcctgtgtgctcaatggagaactgcct
cttcgttccaggtgccacatcatctcacaattcaaccaaggcttctacgattgtgttatt
gcaactgatgaggaagtgctaggggccccttttaaaggcaagcgtcggggccaaggatcc
aaaggagagagggcctctgatacagaatctggtgtggcacgtggcattgacttccacaat
gtgacagctgtgctcaattttgatctcccaccttcccctgaggcctatattcatcgagct
ggcagaactgcacgtgctaacaacccaggaacagccctgacatttgtactgcccacagaa
cgtccccagctcaaagaaattgaagaggcccttggtggagaaagtgcagaatccatgttt
cttccctaccaatttcgaatggaggagattgagggtttccgataccgttgtcgggatgcc
atgcgttctgtgactaaacaagccattcgggaagcaagactgaaggagattaaagaggag
cttctgcactcagagaagctcaagacctactttgaggacaaccctagagatttacagctc
ttacgacatgatcggcccctgcaccctgcagtagtgaagccccatcttggccatgttcct
gactacttggtcccccctacacttcgtggcattgcccgccctcacagcaagcggaaacgg
aacagacccttcacctccctcaggaaattaaagaccccaaggacacagaaccctctgcga
aacttcaagtataccagaaagaagccaaggacctcagccccttcagctaagcactcctga
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