Monodelphis domestica (gray short-tailed opossum): 100030273
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Entry
100030273 CDS
T01031
Symbol
PKD1L1
Name
(RefSeq) polycystin 1 like 1, transient receptor potential channel interacting
KO
K04987
polycystin 1L1
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mdo03037
]
100030273 (PKD1L1)
04040 Ion channels [BR:
mdo04040
]
100030273 (PKD1L1)
Cilium and associated proteins [BR:
mdo03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
100030273 (PKD1L1)
Ion channels [BR:
mdo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100030273 (PKD1L1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
REJ
PKD
PKD_4
PLAT
Polycystin_dom
PKD_channel
GPS
Motif
Other DBs
NCBI-GeneID:
100030273
NCBI-ProteinID:
XP_016280056
LinkDB
All DBs
Position
6:270489936..270677805
Genome browser
AA seq
2825 aa
AA seq
DB search
MEGGYWKHRWRLLSQAGFVWILLVASALGNNSKNDSEDGTCWLLDHNSTETPKQGKTEYL
TANDCEGVISDYFKFCFPKRCPKISCLFYQDDSGNLKPYICSTLLRVLIVSVQTGKAKTA
GHLCTPKDSICNWTLDNDLLLTSGSLIMAYRCLEMGLHIIGLTVSDVTSTAPTQSLFNMT
LEKVGIGFLDLGSSSPEVLILSPLKHILKTRRDLILSFGDEKTQSLPNWVGSNNRSFNTI
FSVPGICDFAASVSNPHNYIFFIQCLPGHIKIGGSVIDGKPDFPPRRNHSRLWLPENRHS
SLELGFGVHTSSDNITSLVFDFGDGTVVQVSIKEGSDEVEIIAYHQYRKEGTYMIKVIIF
NEFHSTEKELGPYYIEISQEDLVVFMNSSSVHKDEVILFSSTFQRTTTRIYTRSMRDHAT
SVKEGSVVMHRFSSISSYDIFLMAPDRESGCLAWASVNVQYQMQAVSIFTNGTVFATDYE
ITFSVLTNETSPLEFVWHFGDGSWGRTTSRSIKKRYSIPKRYHVIVNAANQISSVASHIH
TISIERKIVPNRLVSSSSALINSSVSFECRINFGTNVTYLWNFGDGIIHLGKWTEKHIYK
RGGEFTVEVFIFNSVSSAALKKQVFIVPQPCQPPLVKNMGPGRIQIWRHQPLKLGVTFEV
PIQCDISQGLDYSWSLIKSDGSLVLFPAALNQHRQTILLPSYFLEYGNYTAFAKVKIKGN
VVYSNYSVDIEVISRPPVSVISEGTHLMISKTPFSIVVLNGSQSFDPDDPGTHLKYYWKC
APASKRNQMCFNSPRYSLFNSSASIISFPASLLNDSYDQFLVTLTVSNENQNSSEAQMFL
SVQSDSTFRPLYISWVNFKDNSVNWNEEFSLQVKCEECTNMPNISYSWDLFLINATETND
IKVSFCRAADLLSPSSLVDAIFTIPKSNLQMSIPALTTTPFPRDIPGQSIRQLTQLAQVK
TSISAASINITIGFHHASDTSHRESSSPSAMEDQVLERLLSPIRGLQEKKPVIRSIQREK
SANSELPQNSSYISDFEAYYSDIKEAIETSRGRQPGGSISITESRENEEPDTVSDNDDGY
NLIDSSYSTENRGPLLMVDWSKSLISRSVFQSYTSSGITSRTVTFKPFSLRGGETYVLQA
SVVSSHRPLGKAQLYFTVNEVPKEMECQVQPIHGYEAYTIFSVFCMSGKADYLYEFSYQI
GKSSKIPLYRGRDIQYYFTLPAGELVDKYKVTVYTEITNRYGSKSHPCAVNVTVLPSFHR
SISSLNYRPEEDLYNSGLKNLTTLLLMGNFGEIRNYITMLTSILNDFYTEDQSSTLSLQS
QMRNLLISSVCTLSFQDQEEMADSILMLNELISISKQVTFSSTVLIIKYVRKLIDHSNLS
GQFVMNKELMSNVIFLVSRALEVKEKEKSRNAKYFREGIRNIVFLLLNYVSSGKEFQFNI
STGQMAFQTNLHYTFHNSVEHVGSVKVHLPDDLDEYISKGMGLHGQCYISQLIYFKEYPY
LEEIVPVQTGGVMVALSLYNCTSKRKISIKRLTSPVTVAFEKSDAQDDEQNKTIFSLFRD
KVNLHYFSGLPETSQESLQIVVEFSKTILRTFPIMLLVRFSEKPTISTFNVKQIHSWDEQ
VVQIYIPAVSLKDAASGYLSLLDADYDQKPTNKYLADIVNYTVSFHWIRCLFWDEDREWK
SDDSYPQQGTSPQTVNCSYNHFTTFTVVRRKLKANFEINDVSLLRSIPQNLFPSILVLLS
LLLFAFLAIASKRRDLHEQKKNGSIFLQGNSQARDKQVYLVIIDTGFRAPAQLTAKVHIV
FYGEYEFSETRELYCPEKPLFERNSRHTFIVSIPNNLGPLWKIHLWHDNSGCSPRWYISH
VIVKDLITGASWFFPAECWLAVNKWDGKVDRELTPLKSGLGFRKLLYSKFTEYLEDFHMW
ISVYSCPSYSCFTHTERLTVCLFLVLGYMSLNAALIAMQQEEYFPEVGLLDVSVVSLMNG
MLSIFIISPVALLLSLLFRLSEKITRNPIDNQYKSQRGSPTYSAKGHDFHQWTQNKYEQN
ALEEFTLVASSGNENEKKEENSAAFVRYSRHFGDYSIDLDIPKGSHAHSKCPSESSDGLE
EPTPRKLMVLPPWLSYVAWATCGLISIACGLMAGLLGYRFGPSKCIQWIHSVFFSIVGCI
FVAQPLMIFFVALALAWRKRDHKGFFIEALYDATKNLEYELHHLSKNHALYSSYCSTPNT
AADFEKILVARQRARYLQWVHPPTLAQLKEARWRIRKEMLLQTAIRNFLTHILMLFLLIF
IIFGKISHHEYYLNRAIQNEFTRNARNPFIDIKNADDWWNWSLTTLLDGLYWDKENNDDI
PRIQSGPLGGKCHLIGPSIIRQIKFTEQFSIPVEASSLSHQPQNQDYENILQSESEKPKV
IQTKRCLSCGQVENEEDEVSVVNLGRIRAKAYSILINLRNSGWIDKRTREIATHFVLYNP
PTNLFTSVSLLAEVLPTGDIITSSLVESFSIYHFHSALSYCILFSELVFLVLSLIHLCFQ
IFIMIQKGILSYWQNSRNWLEMCIIGMSLSYFAHSIFHFILVVDVIDQFHRGFFQVFVDF
DPILSWHQRNRYLQGSLLFLLLIKCLHLLGIYKAIAPSLTMMRLSFSNIILPLLAGVLFT
VVYSYLGRFLFSTHAFPFRSFADSFQMLLLCFLGTNEKGTFFSLYKSNQYTTVYYYGTLF
IAVIILWSGILKGVLIAFRQDAKRSCRSQPLVRFKEVADHIWEKVLSSLGIQRPLLAVAE
IIEDSNFYLDEFENVLDELLLRVNSLYYSLHCSPLEKSPRDQEEVDQKDKTLAYYLSSPS
VESNR
NT seq
8478 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaggttattggaagcacaggtggagactactaagccaagcagggtttgtctgg
atccttttggtagcttccgctcttgggaacaattcaaagaatgactcagaggatggaaca
tgctggttacttgaccacaatagtacggagaccccgaaacaaggaaagacagaatatctt
actgcaaatgattgtgaaggagtaatttctgactatttcaaattttgtttcccaaaaaga
tgccctaagatttcctgtttattttatcaagatgactcagggaacttgaagccttatatt
tgtagtactctcctcagagtgcttattgtcagcgtgcaaactggaaaagcaaagacagca
ggacatctgtgtacgcctaaagattccatctgtaattggaccttagacaatgatttacta
ctcacttctggatctcttataatggcctacagatgcttggagatgggactgcatataatt
ggtttgacagtttctgatgtaacatctactgcaccaactcagagtctatttaatatgaca
ctggaaaaagtaggtattggatttcttgatcttggcagttcatctccagaagtgcttatt
ctgtcaccattaaagcacattttgaaaacacgtagagacctgattttaagtttcggtgat
gaaaaaacacaatctcttccaaattgggttggcagcaataatagatctttcaacacaata
tttagtgttcctggcatatgtgattttgctgcttcggtatctaatccccacaactacatc
ttcttcattcaatgtcttcccgggcacatcaaaataggaggttcagttattgatgggaag
cctgattttccaccaaggaggaaccacagtcgcctttggttgcctgagaacagacactcc
tctctggagctgggatttggtgttcatacttcctcagataatataacttctctagtgttt
gattttggggatggtactgtagttcaagtcagcatcaaagaagggtctgatgaagtagaa
atcattgcttatcaccaatatagaaaagaaggtacatatatgatcaaagtgattattttc
aatgagtttcatagcactgaaaaggagttaggaccttattacatagaaatatctcaagaa
gatttggtggtattcatgaattctagcagtgtccataaggatgaagttatacttttctcc
agcaccttccaaagaacaacaactagaatatataccagaagcatgagagatcatgccacc
tctgtgaaagaaggatctgttgttatgcatagattttcatctatttcttcatatgacata
tttttaatggcaccagatagagaaagtggttgcctagcttgggccagtgtgaatgttcaa
tatcaaatgcaagctgtttctatctttactaatggaacagtatttgccactgattatgaa
atcacattttctgttcttacaaatgaaacaagtccacttgaatttgtttggcattttgga
gatggttcatgggggagaacaacttcaagaagtattaaaaaaagatatagcattcccaag
aggtatcatgtaatagttaatgctgccaatcagatcagctctgtcgcctctcacattcac
actatcagtatagagaggaaaattgttccaaatcggcttgtatccagctcgtcagctctg
ataaattccagtgtgagttttgagtgcagaatcaattttggtacaaatgttacttacttg
tggaactttggggatggtattatccatcttgggaaatggaccgagaagcatatatataag
aggggaggagaatttacagtggaggtttttatctttaatagtgtcagttctgctgctcta
aaaaagcaagttttcatcgtgccccaaccttgccagccacctttggtgaaaaacatgggg
cctgggagaatacagatttggcgacatcaacctcttaagcttggagttacttttgaagtt
cccattcaatgtgacatttcccaaggccttgattacagttggtccttaataaagtctgat
ggctcactagtattgtttccggctgccctcaaccagcacagacaaaccattcttcttccc
agctactttcttgaatatggaaactatactgcatttgcaaaggttaaaataaaaggcaat
gtggtgtatagtaattattctgtagatattgaggtgatttctcggccacctgtcagtgtg
atttcagaggggacacacttgatgatctctaagacccccttttctattgttgtactcaat
ggctcacagtcctttgatcctgatgatcctggaactcatttaaagtattactggaaatgt
gccccggcaagtaaacgaaatcagatgtgtttcaactctcccagatatagtttattcaac
agcagtgcatctatcatcagtttcccagcatcacttcttaatgactcctatgatcaattt
ttagtgacactaacagtgtcaaatgaaaatcaaaactcttctgaagcccagatgttctta
tcagttcaatcagactctacattcagaccactctacatttcttgggtcaactttaaagac
aattctgtgaactggaatgaagaattttctctccaagtgaagtgtgaagaatgcaccaac
atgcctaacatttcttattcttgggatctttttttaatcaatgcaactgaaacaaatgac
ataaaagtttccttttgtagggctgcagatctgctaagcccatcaagccttgttgatgcc
atcttcacaattccaaagtcaaatctacaaatgagtattcctgcccttacaaccacaccc
ttcccaagagatattcctgggcagtctatcaggcagctgacccagttagctcaagtgaaa
acctcaatttctgcagcatccataaacattacaattggatttcatcatgcaagtgatacc
agtcacagggagagcagcagtccctcagctatggaagatcaggtactggaaaggctactt
agcccaattagaggcttacaagaaaaaaaacctgtcataagatccatccagagagaaaag
tcagcaaacagtgagctaccacaaaattcttcttacatttctgattttgaagcttattat
agcgatatcaaggaggcaatagaaacatcaagaggaagacaaccagggggtagtatcagt
attacagaatcaagggaaaatgaagagccagatactgtgtcagacaatgatgatggttac
aatctaattgattcatcttactccactgaaaatagaggaccattgcttatggtggattgg
tccaaatcattaattagtagatctgtttttcaaagctacacatcttcaggtattacatca
agaactgttacatttaaaccattttccctgagaggtggagagacttatgtgctacaagct
tctgtggtctcaagccacagaccattaggcaaagcacagttatattttactgtcaatgaa
gttccaaaggagatggaatgccaagtacagcccattcatggttatgaggcttatacaatc
ttcagtgttttctgcatgtctgggaaagcagattatctctatgaattcagctaccaaata
ggaaaatcctccaaaatacctttatatagaggaagagatatacaatattactttactttg
ccagctggtgagcttgttgacaaatacaaagtaacagtctatactgagatcacaaacaga
tatggctctaaatctcatccctgtgctgtgaatgtgacagtattgccaagtttccatagg
agcatatcatctttgaattacaggccagaagaggatctgtataattcaggactaaaaaac
ctaaccactcttctacttatggggaactttggagaaattagaaattatatcacaatgcta
accagtatcctgaatgatttctatacagaagaccaaagttctacattaagcctacagtca
caaatgaggaatttattgatttcttcagtatgtactttatcttttcaggatcaggaagaa
atggctgattctattctaatgctgaatgaactaataagtatctccaaacaggtaacattt
agtagtacagttctgatcatcaaatatgtcagaaaattaattgatcacagcaacttatct
gggcaatttgtgatgaataaggagttgatgtccaacgtgatctttctagtatcaagggca
ctggaggtgaaagaaaaggaaaaatccaggaatgcaaagtatttcagagaaggaattaga
aacattgtattcttgctattgaactatgtgtcttcaggtaaagaatttcagtttaatatt
agcactggacagatggcattccagaccaacctgcattacacttttcacaactctgttgag
catgttggctctgttaaggtccatttaccagatgacctagatgagtacatttctaaagga
atgggattgcacggccagtgctacatcagtcagttaatatacttcaaagaatatccatat
ttggaggaaatagttcctgttcagactggtggggtcatggttgccttgagcctctacaac
tgcactagcaaaaggaagatcagtataaaaaggctgacaagtccagtgacagtagcattt
gagaaaagtgatgctcaggatgatgagcaaaataagacaatattttcattgtttcgtgac
aaagtgaacttacattatttctctgggcttcctgagacctcccaggaatctctacagata
gtagtagaattttctaaaaccatcttaagaactttccccataatgctgcttgtcaggttc
tctgaaaaacctactatttcaacttttaatgtgaaacagattcactcttgggatgaacaa
gttgttcagatttatatacctgctgtttccctgaaagatgcagcatctggttatttatcc
ttgttagatgctgattatgaccaaaagcctacaaacaaatatctagctgacattgtgaac
tatacagttagttttcactggatccgatgcctgttttgggatgaggacagagaatggaaa
tcagatgattcttatccacaacaaggaacttctccacaaacagtgaattgcagttataat
catttcacaacatttactgttgtaagaagaaaactaaaagccaactttgaaattaatgat
gtatctctattaaggagcatcccacaaaacctgtttcccagtattcttgttctgctttct
ctgcttctttttgcttttttggccattgcaagcaagcgtagagacctacatgaacaaaag
aagaatggatccattttcttacagggaaactcccaggctagagacaaacaggtctattta
gtcattattgacacaggttttcgagccccagcacagttgactgcaaaggttcacattgtt
ttctatggagaatatgaattttcagagacaagagagctctattgcccagagaagcccctt
tttgaaaggaactccagacacacctttatagtaagtattccaaataatctaggcccactt
tggaaaattcacctttggcatgataacagtggatgttctccaaggtggtatatcagccat
gtaattgtgaaagatctgattacgggagcaagttggttctttcctgctgagtgctggtta
gctgtgaacaagtgggatgggaaagtcgatcgagagctcacacctctcaaaagtggactt
ggtttcaggaaacttttgtactccaaattcactgagtacctagaagatttccacatgtgg
atatcagtatatagctgtccgtcgtatagttgcttcactcatactgaaaggctcacagtt
tgccttttcttggtattaggatatatgtctctcaatgctgcattaattgccatgcaacaa
gaagagtactttcctgaagttggcctccttgatgtctctgtagtctccttaatgaatggc
atgctctccattttcatcatctccccagtggcattattactatctctactattcagactc
agtgagaaaatcactaggaatcccattgataaccaatataaatcccaaagaggatcgcca
acatattcagcaaagggccatgatttccatcaatggacacagaataaatatgagcaaaat
gctttggaggaatttactctggtggcttcctctggaaatgaaaatgagaaaaaggaagaa
aacagtgctgcctttgtcagatactccaggcattttggagactacagcattgaccttgat
attccaaaaggatcccatgctcattccaaatgcccctcagagtccagcgatgggttagaa
gaacctactccaagaaaactgatggttcttcctccttggctatcctatgttgcttgggcc
acttgtggactgatttctattgcttgtgggttgatggcaggactactaggatataggttt
ggtccttcaaagtgcatccagtggatccattcagtgtttttttccattgtgggttgtatt
tttgttgcccaaccactcatgatattctttgtggcattggcactagcttggagaaaaaga
gaccacaaaggtttctttattgaggcattatatgatgcaaccaagaaccttgaatatgaa
ttgcatcatctttccaagaatcatgctctgtactcttcatactgttctactcccaacact
gcagctgactttgaaaaaatactggtagcccgtcaaagagcacgttatttacaatgggtc
cacccaccaactttagcccaattaaaagaagcaagatggagaattagaaaagaaatgctc
ttacaaacagcaattagaaactttttgacccatatactaatgctgtttttacttatattt
attatatttggaaaaatttcccaccatgaatactatcttaatcgagccatccaaaatgag
ttcacaagaaatgctagaaaccctttcattgacataaagaatgctgatgactggtggaac
tggagtttgacaactttattggatggcctatactgggataaagagaataacgatgatatc
ccaaggattcagtctggacctcttggagggaaatgccatctgataggtccttcaataatt
agacagataaagttcaccgaacaattttcaattccagttgaagcttcttctctttcacat
cagccccagaatcaagattatgaaaacattcttcagtcagaatcagaaaaaccgaaagta
attcagacaaaaagatgtctctcttgtggtcaagtggaaaacgaggaagacgaagtatct
gtagtgaacctgggcagaataagggccaaagcttactcaattctgatcaacctaaggaat
agcggatggatagataaaaggaccagggaaatcgctactcactttgtcctttacaaccct
cccaccaatctctttaccagtgtatccttattggcagaggtgttgcccacaggtgacatc
attacatcatctcttgtggagtcatttagcatctatcactttcactctgctctgagttac
tgcatcctgttttctgagttggttttcctggtattgagcctcattcacctctgctttcaa
atattcattatgattcaaaaaggtatccttagctactggcaaaactcaaggaactggcta
gagatgtgcataattggaatgagtctttcttattttgcacactccatttttcattttatc
cttgtggtggatgtgattgaccagtttcacaggggatttttccaagtatttgtggacttc
gatcctattttatcctggcaccagaggaaccgatatcttcaaggaagccttttattcctc
ttgttaataaaatgccttcatctccttggcatttacaaagcaattgctcccagcttgact
atgatgcgactttccttctctaacatcattcttccactgctggctggtgtcctgtttaca
gtggtctactcataccttgggcgatttctgttctcaactcatgcttttccatttagaagc
tttgcagactccttccaaatgctgctgttgtgttttctgggaaccaatgagaagggaaca
ttctttagtctttacaagtctaatcagtataccacagtttattattatgggaccctgttc
atagcagtgatcattttgtggtctggaatattgaaaggagttctcattgcttttaggcaa
gatgcaaagagatcttgtagaagtcaaccactggtgagattcaaagaggttgctgaccat
atttgggagaaggtgctctcctccctgggaatacaaagaccattgttagcagtggctgaa
attatagaggacagtaatttctatctggatgaatttgaaaatgtgttggatgaacttctg
ttgagagttaatagcttatactacagccttcattgctctcctctagaaaaatcacccaga
gaccaagaagaggttgatcaaaaagacaagaccctggcttattatctcagctcaccttct
gtggaaagcaacagatag
DBGET
integrated database retrieval system
