Monodelphis domestica (gray short-tailed opossum): 100030437
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Entry
100030437 CDS
T01031
Name
(RefSeq) collagen alpha-4(VI) chain-like
KO
K06238
collagen type VI alpha
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04151
PI3K-Akt signaling pathway
mdo04510
Focal adhesion
mdo04512
ECM-receptor interaction
mdo04820
Cytoskeleton in muscle cells
mdo04974
Protein digestion and absorption
mdo05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100030437
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100030437
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100030437
09142 Cell motility
04820 Cytoskeleton in muscle cells
100030437
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100030437
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
100030437
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mdo04147
]
100030437
00536 Glycosaminoglycan binding proteins [BR:
mdo00536
]
100030437
Exosome [BR:
mdo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100030437
Glycosaminoglycan binding proteins [BR:
mdo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100030437
Hyaluronan
Extracellular matrix or blood plasma proteins
100030437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
Kunitz_BPTI
VWA_CoxE
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
100030437
NCBI-ProteinID:
XP_007505180
LinkDB
All DBs
Position
8:complement(275062609..275207795)
Genome browser
AA seq
2725 aa
AA seq
DB search
MDVSQFLFWAILSAATFCSVKPQINVCREASVADIVFLVDSNLTPEKSQNVQDFLSTLVN
GLNIGKDQIRVGLVQYSNTSSTEFSLSTYPHKEDVLRHIKRLKFKHGDAQTGRSLRFVLE
NLFQEVAGSRIRQGVPQIAVLITDEPAQDDIKGPASALRKAGVLLYTIGLQGAVLSELRE
MASDPDDKFVFMVTDASPLGDLSQNVLLALCTTIVEVTQQGSQVSAACRKAAVADLVFLV
DSSTSIGPENFQKVKSFLYSLVLGLEIGRDQVRVGLAQFNDNIYKAFLLNQFPRKSDVLE
QILSLPYRTGGTRTGSALNFLRTEFFTESAGSRAKDNVPQIVILVTDGESNDEVAEAASK
LKGQGVSIYVVGINVQDVQELKTIASKPLEKFLFSIEDFNILEGLSGNILPTLCSAVENQ
IRAFTKSYADVVFLVDTSEGTSSVSFNQMKDFICRVIDTLEVGRDKDQIGLAQYGNQGHV
EFLLNAYQNPVEMISHIQQNFLPRGGARKTGNGLQYIQETFFQEEAGSRFLQGIPQYAVV
ITSGQSEDLVLEKAQKLKERGVKIMVVGIQDFDSRELKAMATPPLVFEIEGQDGIRQLHQ
GVSLVFGSSGQRHLSPEMGEETLAVCTSASLADIVFLVEASSRIGLENFQLAVELLRKII
HTLIIGPNKVRVGLVLYSDEPRLEFGLNTFLSQSEILSHLNKLPFIGGKTKTGAALDFLR
NTVFTQQKGSRYRQGVQQLAVVITEGYSQDEVDRPASLLRRAGVTVFAVGTLKASGSRDL
NKIASHPPRKHAIYLESFLQLSVITEKIKKRVCTEIVQKTFSVPVMTRTLQEGCVSTEEA
DFYFLIDGSGSINHDDFAEMKTFMIELISTFRVGADHVRFGVVQYSDSPTVEFDIRQHSS
VAQLKSAITKIWQTGGGTRTGEALTFMKRLFSEVARDKVLRFLIVITDGQSQDQVAQAAE
ELRQENITIYAIGVKSAVTKELLEISGSQNRMFFVNDFDSLKPIQQEVIQDICFLEVCKG
MKADILFLVDGSERINTRDFDKMKEFMMQMVNKSDLGPEKVQIGLLQFSSNPQEEFRLNT
YYSKVDILRAITGMVQIRAGARVGSALSFSLPYFERSRGGRLNVPQYLIIIISGKTGDAV
KMPAKALRDKGIKIFAIGVHKANNSQLLEITGAQDKVYYEENFDSLLFLEKQIFFRFCNM
EEACKKTEVADILFLVHASGGITSQELLAIHRLMEAIINDSLVGKDNVRFGAISYSDNSE
VLFSLDTYITKAQIRDAVFHLKPKVGKAHTATALKFAKERFSEMHGGRQSLAVTQILVLI
TNKPTESEEKKYLQESAQTLQEAGIDVFAIGIKNVKRPELQAITKHRDRSFMVQSYNELY
NLHEKVTHIICNESKPICGHREIDLVFLIDGSSSIHPRNFTAMKTFMKQIVNSFTIGKDR
VRIGVAQYSTNPQKEFYLNTFYSGAEINQHIDKITQLRTQTYTGKGLRFVKSFFEPANGS
RKNLHVLQSLVVITDGMSNDSVVEAANDLRNEKIQIFSIGIGVINLFELQLIAGNVKRVF
VVGDFGQLGSIERKVVRELCVPADISDPECNVDISVGLDTSNSIRLVQQTFQRLLPNLMQ
RLTLLSNISCITSTPLNIRLRYHIPAPDGQIRFDSGFEKYNEGIIQKFIDQHDLVNNYMN
VAFVQSLGEKAINLASAKVKVLLVFTDGLDDDLERLKEASEFLRGQGLHALILVGLQSGQ
NLEELQAIEFGRGFGYKQHLSITMNALPSLLLRQLDTVVERECCKVNCKFLGESGNSGVK
GSPGRKGEIGFNGMPGYPGDDGRSGERGFVGLPGPRGEGGCPGIRGLKGSRGFEGDKGIQ
GDYGIDGWNGEQGERGRSGMSGEKGNAGNQGLRGPSGEPGEPGSPGLRGEPGEPGADNNI
RGPKGEKGKPGRQGKFGLRNEGGMPGERGSDGSRGRKGLPGLKGLPGEIGTHGYKGASGH
PGLQGPRGQQGPPGMFGQQGLPGSQGDPGLSGPVGSKGGEGPRGEKGDLGNPGEKGLRGP
GGPRGQPGIDGSDGYGLPGRKGTKGEFGFPGYPGAQGEDGDKGQPGNQGPKGFPGKRGNS
GMPGPKGSPGDPGPPGPMGTKGSKGITDMLPCNIVDFARENCPCSSNKAQCPVFPTEVVF
ALDMSEGVTESEFERMRDILLSLLRRISISQNNCPTDARVAIVSYSAKTHYLIRFSDFHN
KNQLLQAIMNIPLEHSLGQRDLGSAMSFVARNVFKRVRNGILLRKVAIFFVAGPSSDVAS
INTAMLEFDALHISSIIAFTDDPLLQHALSIDDTRKTKMFVWENKDAEVVEHVAYCIFCY
DQCKADEECEATSPKPILVDMDIAYVLDGSSRVTDDMFNAAKSMMVSMLNHFVIASHPET
PSAGARVALVQQTVPGFSPYEGRLPVKKEFDLFMYSRPEQMLRHIQETVHPLQGPPYLGH
ALEWTMENIFPTPPLQRKNRVLFVILGSDTSPLDREKLRRISLEAKCEGFIIFVVGLGKE
VNMEELSKLASFPPQQHVLHLAEISRYGMDYGQGFIRAFLNLLKRETNLYPPPMLVEDCE
GLNRGDIRRQAALTQRLNFIRFRFNESDPRSQKILKMRGPSPRVRGRISKITKTGREDIE
YHHRHEKKVVETPHKTEETGDETTILDPCSMAKDAGVCRKYDLKWYYHQDGHSCQKFWYG
GCGGNSNRFDTKEDCESRCVLITQR
NT seq
8178 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgtcacaatttctgttttgggccattctctctgcagctaccttctgctcagtc
aagccgcagataaatgtctgcagggaagcatccgttgcagatattgtgttcctggtggat
tctaacctaaccccagaaaaatctcaaaatgttcaagacttcttgtcgactttggtcaat
ggccttaacattggcaaagatcaaatcagagtaggcctggtccaatatagcaacacatcc
agtacagagttttctctcagtacttatccacacaaagaagatgtactgaggcatatcaag
agactgaagttcaaacatggtgatgcccaaactggtcggagcttgcggtttgtgctagaa
aacctcttccaggaagtggcaggaagccggatacgccaaggggtcccccaaattgctgtg
ctaatcacagatgaaccggcgcaggatgacatcaaagggccagccagtgctctcaggaag
gcaggtgtcctgctgtacaccattggcctccaaggcgctgttctttctgagctcagggag
atggcgagcgatcctgatgacaagtttgtctttatggtgactgatgcctccccgctagga
gacctttcccagaacgtgttgctggcactctgcaccacaatagtggaagtgactcaacag
ggctcccaagtctctgcagcctgcagaaaagcagccgtagctgacctggtattcttggtg
gacagctccacgagtatcggcccggagaacttccagaaagtgaagagcttcctctactcc
ctggtgttgggccttgagatcggcagggaccaggtccgagtggggctggcccagttcaac
gataacatctacaaggcatttctgctcaatcagtttcctcggaagagcgatgtgcttgag
cagatactgagtctcccttaccggactggggggactcgaactgggagtgccttgaacttt
ctcaggactgaatttttcaccgaatcagcaggcagcagagccaaggacaacgtcccccag
atagtgatcctggtgacggatggggagtccaatgatgaggtggcagaggcagccagcaag
ctgaaggggcaaggggtgtccatctatgtggtgggaatcaacgtccaggatgtccaggag
ttgaagacaatagcaagcaagcccttagagaagttccttttcagtattgaagatttcaat
atccttgagggtctctctggcaacattcttcctaccctgtgctcagcagtagagaatcag
atccgagcgtttaccaagtcctatgctgatgtggtcttccttgtggatacctcagagggc
acatcatcagtcagtttcaatcagatgaaagattttatttgcagagtcattgacacattg
gaggttgggcgtgacaaggaccaaattggactggcccaatatggtaatcagggtcatgtt
gaatttttactcaacgcctaccagaacccagttgagatgatctcccacatccagcagaat
tttctaccccgagggggtgccaggaagacgggaaatggcctccagtatatacaggagact
tttttccaggaggaggcaggaagtcgcttcctccagggcatccctcagtatgcagtagtc
atcacatctggccaatcagaagacttggtcttggaaaaggctcagaagcttaaggagagg
ggagtgaaaataatggtggttggtatacaggattttgatagtagagaactgaaggctatg
gccactcctcctcttgtgtttgagattgaaggacaagatggcattaggcaacttcatcag
ggtgtgagcctggtgtttggaagttctggccagcggcacctcagtcctgagatgggtgaa
gaaaccttagcagtgtgcacaagtgcttccttggctgacattgtgtttcttgttgaagca
tcaagcagaattgggttagaaaatttccagctagctgtagagttactgaggaaaattatt
catactctaattattggccccaacaaggttagagttggcttggtgctttatagtgatgag
cccaggcttgagtttggcctgaacacatttctgagccaatcagaaatcttaagccacttg
aacaagttgccattcataggtggcaagaccaagacaggagctgctttggacttcctcagg
aacacagtatttactcaacagaagggaagtcggtacagacaaggagtacaacaacttgct
gtagtcatcacagaaggctattcccaggatgaggtggacaggccagcttctctcctccga
cgggctggggtcactgtctttgctgtgggcactttgaaagcttcaggaagcagagacctg
aacaaaatagcatcccacccacctcggaagcatgccatctacctggaatcattcctgcag
ctctcagtgatcacggaaaagataaagaaacgtgtatgcacagagattgtgcagaaaacc
ttttctgttccagtgatgacccgtaccctgcaagaaggctgtgttagcaccgaggaagcc
gatttctatttcctcatcgacggctcaggcagcataaaccacgatgactttgcagagatg
aagacgttcatgattgagctgataagcacgttccgggttggtgcagaccatgtgcggttt
ggggttgtccagtactccgactctcccacagtggagtttgacatcagacagcacagcagt
gtggcccagctgaagagtgccatcacaaagatctggcaaactggaggtggcacccgcact
ggagaagccctgacgttcatgaagcgtctcttttcggaggttgccagggacaaagtcttg
cgttttctcattgtgatcacagatgggcagtctcaggaccaagtggcccaggcggcggag
gaactgaggcaggaaaacatcaccatctatgccattggtgtcaaatctgccgtcaccaaa
gagctccttgaaatctctggctcacaaaataggatgttttttgtgaatgactttgattcc
ttaaagcctattcagcaagaagtcatacaggacatctgcttcttagaggtatgtaagggt
atgaaagctgacattctcttcttggttgatggctctgagagaatcaacaccagagacttt
gacaagatgaaggaattcatgatgcagatggtaaacaagtcagatcttggccctgagaaa
gtacagattggcctcttgcaattcagttcaaacccccaggaagagtttcgtctcaatacc
tactactccaaggtggacattcttagggccatcactggtatggtacagattcgagcaggt
gcccgagtggggagtgccctatccttcagtttgccttactttgagaggtcaagaggagga
agacttaatgtaccccagtatttgatcataattattagtgggaaaactggggatgctgtg
aaaatgcctgctaaggccctaagagataaaggaatcaagatttttgccattggggtacat
aaggccaacaactcccagctgctggaaatcacaggtgcccaagacaaggtgtattatgag
gaaaacttcgattctctccttttcttggagaaacagatattttttaggttctgcaatatg
gaggaagcctgcaaaaagacagaagtagcagatattctattcttggtgcatgcttctggt
ggcatcaccagtcaagaactcctagccattcacagactcatggaagccattatcaatgac
tcactggttggaaaggacaatgtgagatttggggctatctcctatagtgacaattcagaa
gtactgttttcattggacacctacattaccaaagcacagattagggatgctgttttccac
ttgaaaccaaaggtgggaaaagcccacacagccacagctttaaagtttgccaaggaaagg
ttttctgagatgcatggaggtcgccaatccttggctgtcactcagatcttggtgctcatt
accaacaagccaactgaatctgaagaaaaaaaatacctacaagagtcagcacagactctg
caagaagctggcattgatgtttttgctattggaataaaaaatgttaagaggccagaactt
caggctatcacaaagcatcgggaccgatcattcatggtgcagagttataatgaactttat
aatttgcatgaaaaagtgactcatattatttgtaatgaatcaaaaccaatttgtggccat
cgggaaatagaccttgtgtttctcattgacggatcctccagcatccatccccgaaacttc
actgctatgaagacctttatgaaacagatagtgaacagttttactattggcaaagataga
gtccgcattggggtagctcagtatagcactaatcctcagaaggaattctacctgaatact
ttctactccggtgctgaaatcaaccaacacattgacaaaattacccagttgagaactcag
acatacaccggcaaagggctgaggtttgtgaagagctttttcgaaccagccaatgggagc
cggaagaacctccatgtgttacagagcctggtagtcattactgatgggatgtccaatgat
tctgtagtggaagcagcaaatgacctaagaaatgaaaaaatccagattttctccattggt
attggtgtcatcaacctctttgagcttcagcttattgctggcaatgtgaagagggtgttt
gtggtgggcgacttcggacagctgggcagtattgagaggaaggttgtcagggagctttgt
gtacctgccgatattagtgatcctgaatgcaacgtcgatatctcagtaggacttgacact
tccaattcaataaggctggtacagcagacatttcagcgcttgctgccaaacctgatgcaa
agactgaccctgctatccaacatcagttgcattaccagcacaccactcaatatcagacta
cgctatcatattcctgctcctgatggccagattcggtttgactctggttttgagaagtac
aatgaaggcatcatccagaagttcattgatcagcatgacttggtgaacaactatatgaat
gtagcttttgtgcagtcccttggggagaaggccatcaatttggcttctgctaaagtgaag
gttctcttagtgtttacagatggactggatgatgatttggaaagactaaaagaagcatca
gagtttcttcgtggccaaggtcttcatgcacttatattagttggcttgcaaagtggacag
aatttagaagaactccaggccattgaatttggcagaggatttggttataaacaacatctg
agtatcacaatgaatgctcttccaagccttttgctgaggcaacttgacacagttgttgaa
agagaatgctgtaaggtcaattgcaaatttttgggagaatctggtaactcaggagtaaaa
gggagtcctgggaggaagggagagataggttttaatgggatgcctggctatcctggtgat
gacggtagatctggggaaagaggatttgttggcttgcccggacctcgtggtgaaggagga
tgcccaggtataagagggcttaagggatcaagaggatttgaaggagacaagggcatccag
ggtgattacggaatagatgggtggaatggagaacagggtgaacgtggcaggtctggaatg
tctggagaaaaaggaaatgcaggaaatcagggtttgaggggcccttcaggagagcctggt
gaacctggaagtcctggtctgagaggagagcctggagaacctggtgctgataataatatt
cggggtcctaagggagaaaaaggaaaaccgggtcgtcagggcaaatttgggctccgcaat
gaaggaggcatgcctggtgaacgaggttctgatgggtcaagaggtagaaagggcctacct
ggtctgaagggtttgcctggagaaattggtacacatggttacaagggagcttctgggcat
ccaggcttgcagggtccaagaggccagcaaggaccaccaggaatgtttggacaacagggt
ttaccgggatcccagggggatcctgggctgagtggaccagttggttctaaagggggcgaa
gggccaagaggagagaagggagatcttggtaacccaggagaaaaaggcctcagaggacca
ggaggaccaagaggacagcctggtatagatggcagtgatgggtatggccttccaggaaga
aaaggaaccaagggtgaatttggcttccctggataccctggtgcacaaggggaagatggt
gataaaggccaaccaggaaaccagggaccaaagggatttccagggaagaggggaaattct
ggcatgcctgggccaaaaggatcaccaggagatccagggccacctgggccaatgggcacc
aaggggtcgaagggtattacagacatgttgccttgcaacattgttgacttcgcacgagaa
aattgcccttgttcatcgaataaagctcaatgtccagtgttcccaactgaggtggtcttt
gctctggacatgtctgaaggtgttacagagtcagaatttgagaggatgagggacattttg
ctgtcattgctaagaaggatcagcatcagccaaaacaattgtccaactgatgcccgggtc
gccattgtttcatacagtgccaaaacacattacctgattcgcttctccgacttccataat
aagaatcaactccttcaagccatcatgaacatacctctagagcattccttgggccagcgg
gaccttggcagtgccatgagttttgtggcaagaaatgtcttcaaacgtgtgcgcaatggc
atcctgctgaggaaagttgccatattttttgtggcaggtccatcctctgatgttgcttct
attaacacagccatgctggagtttgatgccctgcacatttcctccattatcgccttcact
gatgatcccctcctacaacatgctttgtcgattgatgataccaggaagactaagatgttt
gtttgggaaaataaggatgctgaggtggtggagcatgtagcctactgcattttttgctac
gatcagtgcaaagcagacgaggaatgtgaagcgaccagccctaagcccatcctggtggac
atggacatagcctatgtgttggatggctcttccagggtcacagacgacatgttcaatgca
gccaaaagcatgatggtctccatgctgaatcactttgtcattgcttcccatcctgagacc
ccctctgctggggccagggtggccctggtacagcagacggtcccaggcttttccccttat
gaaggcaggctcccggtcaaaaaggagtttgacctcttcatgtacagtcgcccagagcag
atgctgaggcacatacaggagactgtccacccactccaagggcccccttacctgggccat
gccctagagtggaccatggagaatatctttccgacacctcccctccagaggaagaaccgg
gttctctttgtgatcctgggaagtgacacaagtcccttggacagggagaagctgagaagg
atctccctggaagccaagtgtgaaggcttcatcatttttgtcgtgggcttgggcaaagaa
gtcaacatggaagagttgtccaagctggccagcttcccgcctcagcagcatgtgctgcac
ttggctgagatttcccgttatggaatggattatggccaggggttcatccgtgccttcctg
aatcttctgaaaagggagacaaacctatatccacctcctatgcttgtagaggattgtgag
ggactgaatcgaggagacatccggagacaggcagccttgactcagagactgaactttatc
aggttcaggttcaatgagtcggaccccagaagtcagaagatacttaagatgaggggccct
tctccaagagtgaggggaagaatttctaaaatcaccaaaactggtcgtgaagacattgag
tatcatcatagacatgaaaaaaaggtcgtggaaaccccacacaagacagaagaaactgga
gatgaaaccaccatccttgatccttgttccatggctaaggatgctggggtatgccggaaa
tatgacttgaagtggtactatcatcaggacgggcacagctgccagaagttctggtatggt
ggctgtggtggcaactcaaatagatttgataccaaggaagactgtgagtcccggtgtgtg
ctgataacccagagatga
DBGET
integrated database retrieval system
