Monodelphis domestica (gray short-tailed opossum): 100030904
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Entry
100030904 CDS
T01031
Symbol
ARHGEF12
Name
(RefSeq) Rho guanine nucleotide exchange factor 12
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04270
Vascular smooth muscle contraction
mdo04360
Axon guidance
mdo04611
Platelet activation
mdo04625
C-type lectin receptor signaling pathway
mdo04810
Regulation of actin cytoskeleton
mdo05135
Yersinia infection
mdo05152
Tuberculosis
mdo05163
Human cytomegalovirus infection
mdo05200
Pathways in cancer
mdo05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
100030904 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
100030904 (ARHGEF12)
04625 C-type lectin receptor signaling pathway
100030904 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
100030904 (ARHGEF12)
09158 Development and regeneration
04360 Axon guidance
100030904 (ARHGEF12)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100030904 (ARHGEF12)
05205 Proteoglycans in cancer
100030904 (ARHGEF12)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
100030904 (ARHGEF12)
09171 Infectious disease: bacterial
05135 Yersinia infection
100030904 (ARHGEF12)
05152 Tuberculosis
100030904 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mdo04131
]
100030904 (ARHGEF12)
Membrane trafficking [BR:
mdo04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
100030904 (ARHGEF12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
PH_13
SOS1_NGEF_PH
Pept_S41_N_bact
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
100030904
NCBI-ProteinID:
XP_007494698
Ensembl:
ENSMODG00000013134
UniProt:
F7B035
LinkDB
All DBs
Position
4:complement(228530197..228757919)
Genome browser
AA seq
1539 aa
AA seq
DB search
MSGTQSTITDRFPLKKPIRHASILTRESPTDKKQKVERSTSHDIDPTDSSSKKTKSSSEE
SRSETYGLVQRCVVIQKDDNGYGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNGT
LVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQIPLADSEVEPAAFGHMSPIMTSPHSPG
TSGNTERITSPVLMGEENNVVHSQKVEILRKMLQKEQERLQLLQEDYSRTPAPRLLKEIQ
EAKKHIPQLQEQLSKATGSAQDGTVVLPSKSSGDSFLLSEVEADSGDGLGRIDCSSGDGS
RPNSDIADSPRGGLKERIYLEESPEKNEMMQDNDTQSNIGSPLIRTAPQIIGAEDDDFGT
EHEQINGQCSCFQSIELLRSRPAHLAVFLHHVVSQFDPATLLCYLYSDLYKQTNSKETRR
IFLEFHQFFLDRSAHLKVSVPDEISLDLEKRRPELIPEDLHRHYVQTMQDKVYPEVQKHL
EDFRQKRSMGLTLAESELTKLDAERDRDRVTLEKERACAEQIIVKIEEVLMTSQAVEEDK
SSTMQYVILMYMKHLGVRVKEPRNLEHKRGRIGFLPKIKQSIKKDKEGEEKVKRRGFPSI
LGPPRRPSRHDSSAISRAMELQKQRHPKHLSTPSSMSPEPQDSVKLRQSGIATDVADVMY
MPANSISSLTSGTSASQEGGKENEIGSKSIGEAPGSGDSTDGTPRTPNTVFDFPAPPLDQ
LQEEEGEVERLPEHGTPKTFRKLDSIAFGESQSEDEQFENDLETDPPNWQQLVSREVLLG
LKPCEIKRQEVINELFYTERAHVRTLKVLDQVFYQRVSREGILSSSELRRIFSNLEEILQ
LHIGLNEQMKAVRKRNETSVIDEIGEDLLIWFSGAGEEKLKHAAATFCSNQPFALEMIKS
RQKKDSRFQTFVQDAESNPLCRRLQLKDIIPTQMQRLTKYPLLLDNIAKYTERPKEREKV
KKAADHCRQILNYVNQAVKEAENKQRLEDYQRRLDTSNLKLSEYPNVEELRNLDLTKRKM
IHEGPLVWKVNRDKTIDLYTLLLEDILVLLQKQDDRLVLRCHSKILASTADSKHTFSPVI
KLNTVLVRQVATDNKALFVISMSDNGAQIYELVAQTVSEKAVWQDLIGRMALSVKEQSTK
PIPLPESPPCEGEHDEEEASKLKEESHGVSTSSLQSPEKHMGAEISLMSKPQSSSSVTSG
KSEISDILAERQFEKEQQAEETLKESEMDYQSTVPEPHFPVSEERWALDALRNLGLLKQL
LVQQLDLTEKKTHEDWQHFPRFRAASQGVQVKCPDTIQNVLDHSENNKTSQPCEGQMPLQ
TRTGETAACYSPRTSIESPIPQDYMELASQNSRASNLLVMDHMITTPEPSSTELEGGPDD
SGEHFFDAREVHSDDNPSESDGIERKEEETVQLRISGNVLILDGYETVQESSTEEDVVPG
LPAMGWAHQQQPLRDARSDGGGSPFTSEYLIQPRWGPVEEFGFSAQSPPSSTDSHSQIMQ
YIGKIEADLEHLKKVEESYMTLCQRLAGSALTEEHSDKS
NT seq
4620 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtcgactatcacggacaggtttcccctcaaaaaacctataaggcat
gcaagtattttgacccgagaatctccaacggacaagaagcagaaagttgaacgtagtaca
tcccatgacattgaccccacagacagctcctccaagaagacaaagtctagttcagaggag
agtagatcggagacatatggtcttgttcagcgctgtgtggttatccagaaagatgacaat
ggatatgggctgacggtcagtggagacaacccagtcttcgtacagtctgttaaagaagat
ggagcagccatgcgggctggagtacaaacaggtgatcgaatcatcaaggtaaatggaact
ctagtgactcattcaaaccatttggaagtggtaaagcttatcaaatcgggttcctatgta
gctctcactgttcagggacgcccacctgggtcgccccagattccattagctgattctgaa
gtggagccagcagcctttggacatatgtctcccatcatgacatccccccattcacctgga
acatctggaaatacagagagaatcaccagtccagtattgatgggggaagaaaacaatgta
gttcacagccagaaagtagaaattctgaggaagatgctacagaaagagcaggaacggcta
cagttgttacaagaagattacagccgcacacctgctccacgattgcttaaggagatccag
gaagccaagaaacacatccctcagttgcaagagcagttatccaaagcaacaggctctgct
caggatggaactgttgttctacctagcaaatcttctggtgactcctttctactcagtgaa
gtagaagcagatagtggtgatgggttgggcagaattgattgtagcagtggagatggttct
cgacccaatagtgacattgcagatagtcccagaggtggcttgaaggaaagaatttatcta
gaagaaagcccagagaaaaatgagatgatgcaagataatgacactcagtcaaacattggg
agccccttaattcgaacagcacctcagatcattggcgcagaggatgatgactttggcact
gaacatgaacagattaatggacaatgcagctgcttccaaagtattgaactgctaagatcc
cgccctgctcaccttgctgtgttcttacaccatgtggtttcacagttcgaccctgcaaca
ttgctctgttatctttattcagacttgtacaaacagaccaattccaaggagactcgacgc
atcttccttgaatttcaccaattctttctggaccgatcagcacacctgaaggtttctgtt
ccagatgaaatatctttagacctggagaagagaaggccagaacttattcctgaagattta
caccgccattatgtccaaactatgcaagataaagtctatcctgaagttcagaagcacttg
gaagactttaggcagaaacgtagtatggggctaaccttagctgaaagtgaattgaccaaa
cttgatgcagagcgagatcgtgacagggtgaccctggagaaagaacgggcatgtgcagaa
cagatcattgtcaaaattgaagaagtgttgatgacatctcaagctgtggaagaagataag
agttcaacaatgcaatatgtgatcctcatgtacatgaagcatttgggagtcagagtcaaa
gagccccgtaatttggagcataagcgaggtcgcatagggtttctgcccaaaatcaagcaa
agtataaagaaagataaagaaggtgaagaaaaagtgaagagaagaggattccctagcatt
ttaggacccccaaggagaccaagccgtcacgatagcagtgcaattagcagagccatggaa
ttacaaaagcagcgccatcccaagcacttatccacaccctcatcaatgagtcctgaacct
caggactctgtgaagttgcgccagagtgggattgccactgatgtagcagatgttatgtat
atgcctgctaattccatatcttctttgacttcagggactagtgcctcccaagagggaggg
aaagagaatgaaatagggtcaaaatcgattggagaagcaccaggttctggagattctaca
gatggtacacctagaactcccaatacagtctttgatttcccagctccaccattagatcaa
ttgcaggaggaggaaggtgaagtagaaagattacctgaacatggaacaccaaaaactttt
cgaaagcttgatagtatagcttttggggaaagtcagagtgaagatgaacagtttgaaaat
gacttagaaacagatccaccaaattggcagcagcttgttagcagagaggtgctactaggg
ctaaaaccttgtgagatcaaacggcaggaagtgatcaatgagttgttctatactgagaga
gctcatgtccgcacactgaaggttttggatcaggtgttctaccaacgagtgtcccgagag
ggaattctgtcatcatcagaactgagaagaatcttctccaacctggaagagattcttcag
cttcacattgggttgaatgaacaaatgaaggctgttcgaaaaaggaatgaaacttcagtg
attgatgagattggagaagatttattgatctggttcagtggagctggagaggagaagttg
aaacacgcagctgctaccttctgtagtaaccagccttttgccctggaaatgatcaagtct
cgtcagaaaaaggattctcgattccaaacttttgttcaggatgctgagagtaatccacta
tgccgtcgactacaactaaaggatattattcctactcaaatgcagaggcttactaaatat
ccccttctgctggataatattgctaagtacacagaacggccaaaggaaagagagaaggtg
aagaaagcagcagatcactgtcgtcaaatcctaaattatgtgaatcaagctgtcaaggag
gcagagaataaacagcgcttagaagattatcaacgtcgccttgatacatctaacttgaag
ctgtcggagtatccaaatgttgaagagctaaggaatttggatttaacaaaaaggaagatg
attcatgaaggaccattggtttggaaagtgaatagagataagactattgatctgtacaca
ttgctgctggaagacattcttgtattgttacaaaaacaagatgatagactggtgttgagg
tgtcatagtaaaattctagcctctacagcagatagcaaacacaccttcagccctgtaatc
aaattgaatactgtgttggttcgacaagttgcaacagataacaaagctttatttgtcatc
tctatgtcagacaatggagcccaaatttatgaattggtggcacagacagtttctgaaaag
gcagtttggcaagacttgattggtagaatggccttgtcagtaaaggaacagtccacaaag
cctatcccactaccagagtcacccccctgcgaaggggagcatgatgaagaagaagcttca
aagctaaaggaggaatcacatggtgtttctacctctagtcttcaaagtccagaaaaacac
atgggagctgagatttctttaatgtcaaaacctcagtcctcttcatcagttacatctggg
aaatcagagatcagtgatatattggctgaaagacagtttgaaaaggaacaacaagcagaa
gagactttgaaagagtctgaaatggactatcagagtactgttccagagccacatttccct
gtatctgaagagcggtgggctttggatgcactgaggaacttgggtcttttgaagcagtta
ttggtacagcagctagatttgactgaaaagaaaactcatgaagactggcagcatttcccc
aggtttagggcagcctcccagggggtacaggtaaaatgtccagatacaatccaaaatgtc
ctggaccattctgaaaataataagactagccagccttgtgaaggacagatgcccctccaa
accagaactggtgaaactgctgcatgttacagcccaaggacttcaattgaatccccaatt
ccacaggattatatggaactggcatctcaaaatagcagggcaagtaaccttttagtaatg
gaccacatgatcacgaccccagaaccatctagcacagagctagaagggggccctgatgac
agcggagagcacttttttgacgcccgtgaagtccacagtgatgataatccttcagaaagt
gatgggatagaaagaaaggaagaagaaactgttcagttacggatctcaggaaatgttctg
atcctcgatggctatgaaacagtgcaggagagctctacggaggaggacgttgttccaggc
ctccctgctatgggctgggctcaccagcagcaacctcttcgggatgcccggtctgatgga
ggaggttctccattcacctctgaatacctcatccagccgcgatggggacctgtggaggag
tttggcttcagtgcccagagtcctccttcttctacagactcacacagccaaatcatgcag
tacattgggaagatagaggctgaccttgaacacttaaagaaggtggaggaaagttacatg
actctttgccaaaggctggctggatcagccctcacagaggagcactcagataaaagttaa
DBGET
integrated database retrieval system
