Monodelphis domestica (gray short-tailed opossum): 100030928
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Entry
100030928 CDS
T01031
Symbol
STAB1
Name
(RefSeq) stabilin 1
KO
K19020
stabilin-1
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100030928 (STAB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mdo00536
]
100030928 (STAB1)
Glycosaminoglycan binding proteins [BR:
mdo00536
]
Hyaluronan
Cell surface receptors
100030928 (STAB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fasciclin
EGF_3
Xlink
EGF_STAB1-2
cEGF
EGF_MSP1_1
EGF
EGF_Teneurin
FXa_inhibition
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
100030928
NCBI-ProteinID:
XP_016279201
Ensembl:
ENSMODG00000011416
LinkDB
All DBs
Position
6:complement(276504086..276562752)
Genome browser
AA seq
2438 aa
AA seq
DB search
RKLPLLCWLHWFRCDQELPACKALACPKNSQCVGADTGAPSCKCLPGFLLQASKCQAQNP
CSPFPCSSFATCSALESGGFECRCKAGYHGDGKFCQPVDPCASNNGGCPSNTTKCVYQRP
GKVTRSSGPGRRRRGRRGASLGEGPGGPNVGLLPSSCPSNTTKCVYQRPGKSSCVCKPGF
YSLSSTISEGCRTSTRTCYHYFCDNSATCQSDEQGKPKCVCKEGEIGNGRSCYGHFLREL
ERKKILRSSLRTLDTAISMLEKGCGDILSKSGPFTVLVPYLYVTSSLNESMSRSLCKLHI
IPGVHLIENGFQTTKTWWTLDGESLTLSSNFRLSNEKIYRYKDQPDQSYEVILANLPAAN
GIFHLVSSLRKQPSSAFIQGDPEKSIGKILASMDVFSRFETILENCGLPSILEGPGPFTV
FVPSNSAVDSLRDGRLIYLFTEGISKLQELVKYHIYSNAGLTVDKLISLKKIPTLANQVL
MTNFTPEGRFLWRPSGIPLKSMDIVASNGIIHLLDGILLPPSILPILPHRCNENQYTIVT
GTCGDCQNQNTSVCPPNSQELDIFPKECFYIHDPDGLNVMRKGCARVCNQTTLKLGCCKG
FFGPECSQCPGGFSNPCYGKGNCSDGIQGNGACICQKAFKGIACHVCADPNRHGEQCEEE
CGCVHGICDNRPGSGGICQKDTCTKGFTGPFCNESLADCSPAGLAQYCHPLARCVTLQGR
SKCVCPPGFQGDGFSCSTRHPCDQPDRGGCSENAQCVRSPSEPHQCVCNKGWKGDGKDCV
AINECELETRGGCHAEAQCHYIGPGQSSCTCKPGFAGDGYQCSRINPCLVANGGCHVLAT
CRPQRDGGQPVCVCPDGYGGDGIACYGTVLEELKRNNYFAGYYQWIKKAGFALPTKGNFT
ALVPSESAIQSMSPEDKAFWLQQQQLLHLLRSHFVPDALTIRQLSDLSGQEVVTLNPPTR
WEISNSSGKITIQNVSMEVADILATNGVLHILSKVLLPSRKDVPLPRLSLRQQLDAIPSF
SIFKKLLLQYGLLARIEAATAYTLFVPANSSVEDYCLKANLSTLDLETVKRHVLLGEALT
PEAMRPGMHRNSLLGTSYELVFSSGQGSQPLVNRVPVVGPTLQPQGGVVLQLGEVLTQRP
NICLRSHIEGVRKKCSSCERKYRCPSGYKKMQNAPPESCFYISNGIRTIGCYYTCIKKKE
MPDCCPGYFGTLCDPCPGGAGSNCSGHGQCQDGRLGNGECRCHEGFHGTACEGCELGRYG
LNCAGVCNCGHGICQDGLLGNGTCSCNVGWKGPHCDQEITASSCPEKCDPFANCINASCV
CSAGYSGNGTNCSEVDPCVQDHGGCSLHANCTKVAPGQRTCTCKEGYAGDGEICLEINSC
LSWNGGCHAKADCVPIGSSKVSCNCGAGYTGDGIQSCVPFNPCTKDNGGCSPYATCNNTG
PGERTCACGILTIGDGFTCRTRMGLELLRDKDAAFFSHYLMEYQELKGEGPFTVFVPRED
LMKNLTRRELSMLNTHRQLLFRYHTVGCGRLLTQDLLEAGYVTTLSGHKLHFSQNEGNLY
INEYAQVVTEDQIGVNGVIHFIDKLLLPPEVVHWTDASSVPPKQNVTEAAESAGYTLFSK
LLTMARMLPMFHDKAHQPLTVLWPSDEALKALSPERQAWLYHEDHREKLAAILRGHVIRN
VKALASDIPNLGQLRTMHGSPISFSCSKALPGELLVGEGEARIVQRHMEFLGGIAYGIDQ
LLEPPGLGSRCDHYVKEQLPAYRQPCSSCDLLPLCPLGYKDQGEVDYCMRAIPSRRPFFL
RYTYYDPFLFSRKTQKSGCRRRCFTVTWKPACCPGHYGIDCQVCPGGPGAPCNGNGVCDD
GMTGTGVCKCHKGFNGTACELCAAGTFGHQCLPCQCTAQGKCDEGVSGSGFCFCNEGWSG
QRCEIKLDEQPVCSPPCHPQAVCRKDNFCECSLDYEGDGRKCTVIDRCQNQHGGCSQHAS
CSQQGTVVTCTCLPDYEGDGVFCQARDPCADGQNGGCSEHAECISTGPNTRRCMCRPGYV
GNGLQCLVEAVPPEDRCLESPGPCHPEATCTDLHFQEKRAGVFHLQAPEGKYRLTFGEAE
KQCLAQGAELASLDQLSAAQQLGFHLCLTGWLSNGTAAYPAVYPSTSCNTSHAGIILRGT
QGSLTERWDAYCYRLRDVTCQCRDGFVGDGYTVCNGKLLDVLAANANFSTFYGLLLDYAN
TTQHGLEFLGFLSDELTSKTLFVPINSGFGNNLTLSWQDLELHASNVTFLSLNLSQGTIL
PAHSGHQLFISNSSAGNSTMFKEGTDVVRVSAVVEWDIIAFNGIIHAIQSPLTAPPKPLA
RTATAVAVGTCTALGAGLLLGLAALYFHHKVKGQGFQFHYFKAEDDEDDFSPWQQGPSPP
LISVPNPTFGGHDTFYEPFDNSFREEEFPDTHRILEEE
NT seq
7317 nt
NT seq
+upstream
nt +downstream
nt
cggaagctgcctctgctttgctggctacactggtttaggtgtgaccaggaactacctgcc
tgcaaggccctggcctgcccgaagaactcgcagtgtgtgggtgcggacaccggggcgccc
agctgcaagtgcctcccaggcttcctgctgcaggccagtaaatgccaagcccagaatccc
tgttctccatttccctgctcttcttttgcgacgtgctcagccctggagagcggaggcttt
gaatgccggtgcaaggctggttaccacggagacgggaagttctgccagcctgtggacccc
tgcgcttccaacaacggcggctgccccagtaacaccaccaaatgcgtctatcagaggcca
ggcaaggtgaccaggagctccggcccgggacgccggaggaggggaaggcggggagccagt
ctgggggaggggccgggagggccgaatgtggggctccttccctcgtcttgccccagtaac
accaccaaatgcgtctatcagaggccaggcaagtcctcttgcgtctgcaaacccggcttc
tacagccttagcagcaccatctcggagggctgccggacctccacgcgcacctgctatcac
tacttctgcgacaactcggccacttgccagagcgacgagcaggggaagcccaagtgtgtc
tgcaaagaaggggagattggaaacggacgttcctgctatggccactttcttagggagctg
gagaggaagaagatcctccgctcaagcttgaggaccttagatacagccatctccatgctg
gagaaaggctgtggggacatcctgtccaagtctgggcctttcacggtgctggtcccatac
ctgtatgtgacttcgagcttgaatgaatccatgtcaagatcgctatgcaaactccacatc
attcctggagtgcatctgatagaaaatggcttccagactaccaagacgtggtggaccctg
gatggagagtcactgaccttatcttccaacttccgtttaagcaatgagaaaatatacaga
tacaaagatcaaccagatcaatcatacgaagtcatcttggccaacttgcctgcagccaat
ggcatcttccatttggtcagcagcctccgtaagcagccctcttctgccttcattcaggga
gatccagagaaatccatcgggaagattctggcttctatggatgtcttcagccggtttgaa
actatcctggagaactgtggcctcccttccatccttgaaggcccagggcccttcactgtg
tttgtccccagcaactctgcagtggacagcctgagagatgggcgactcatttacctgttc
actgagggcatctctaaacttcaagaactggtgaagtaccacatttacagcaatgctggg
ctgactgtggacaagttgatctctttgaaaaaaatcccgaccttggccaaccaggtcttg
atgacgaacttcactccagaggggcgtttcctctggaggccttctggtatccccttgaag
agcatggatattgtggcatccaatggaatcattcacctgctggatggcattttgttgccc
ccgtccatcctgcccatcctgccccatcgatgcaatgagaaccaatacacgattgtgaca
ggcacctgtggagattgccagaaccagaatactagtgtatgtccccccaatagccaagaa
ctggacattttccccaaggagtgcttttacatccatgacccagatggtctgaatgtgatg
aggaaaggttgtgctcgagtctgtaaccagactaccttgaaacttggctgttgtaaaggc
ttctttggtcctgagtgttcccagtgtcctggggggttctcgaatccttgctatggcaaa
ggcaattgcagtgatggtatccagggcaacggggcctgtatatgccaaaaagccttcaag
ggcatcgcctgccacgtctgtgcagatcccaaccggcatggagagcagtgtgaggaagaa
tgtggatgtgtccatggtatctgtgacaaccgcccggggagtgggggaatatgccaaaag
gacacatgcaccaagggcttcaccggccccttctgcaatgagtccttggccgattgtagc
cccgcgggcctggcgcagtactgccaccccctcgcccgctgtgtcacccttcaaggacgt
tccaagtgtgtctgtccacctggcttccagggagatggcttctcctgtagcaccagacat
ccctgtgaccaaccagaccgaggcggttgctccgagaatgcccagtgtgtcaggagcccc
tcggagccccatcagtgtgtgtgcaacaagggctggaaaggagatggcaaagactgtgtc
gccattaatgaatgtgagctggagacgcggggcggctgccacgcggaggcccagtgccat
tatatcgggcccggacagagttcctgtacctgcaagccaggctttgccggggacggttac
cagtgcagccgcatcaacccttgtctggtggccaatggcgggtgccatgtactggccacc
tgccggccccaaagggatggaggacagccagtctgtgtgtgcccggacggctatggtgga
gatggcatcgcctgctacgggaccgtcttggaggagctaaagaggaacaactactttgct
gggtactatcaatggattaagaaagctggcttcgccctgcccaccaagggcaactttacg
gccttggtgccctcggaatctgccatccagagcatgagccctgaggacaaggccttttgg
ctgcagcagcagcagttgcttcacctgctcaggtcccactttgtcccagatgctctaacc
attaggcagctgtctgacctctcagggcaggaggtggtcaccctgaatccacccacacgt
tgggagatcagcaacagcagtgggaaaatcaccattcaaaatgtgagcatggaggtagct
gacatccttgccaccaatggggtcctgcacatcctcagtaaggtactgctgccatctcgg
aaggatgtcccacttccccggctgagcctgagacagcagctggatgccatcccctccttc
agcatctttaaaaagttgttactgcaatatggactactggcccggattgaggccgctact
gcctacaccctcttcgtacctgcaaatagctcggtggaggattactgcctgaaagccaat
ctgagtactctggacctagaaaccgtgaagcgccacgtgctcctaggcgaggctctcacc
ccggaggctatgcgacccgggatgcaccggaattccctcctggggacctcctatgaactc
gtcttctcgagtggccaggggagccagcccctcgtgaaccgcgtcccggtagtgggcccc
acgctgcagccccaagggggtgtcgtgctccagttgggcgaggtcctgactcaaaggccc
aacatttgtctccgctcgcacatagaaggggtcaggaagaaatgtagcagctgtgagcga
aaataccgctgcccttccggctacaagaagatgcagaatgccccaccagagagctgtttc
tacatatctaatggaatccgaaccataggctgctactacacatgcatcaagaaaaaagag
atgcccgactgctgtcctggctacttcggaaccctttgtgacccctgccctgggggcgca
ggcagtaactgctcaggccatgggcagtgtcaggatggccgcctggggaatggagaatgt
cgctgccacgaaggcttccatggcactgcctgcgaggggtgtgagctagggcgctatggg
cttaactgtgctggagtctgtaactgtgggcatggaatatgccaggatgggctgcttggg
aatgggacctgcagctgcaatgtaggctggaaaggcccccactgtgaccaagaaatcacc
gcttcatcatgtccagaaaaatgcgacccctttgccaactgcatcaacgcctcctgtgtc
tgttctgctggatattctggcaatggcaccaactgctcagaagtggacccttgtgtccag
gatcatggtggctgctcccttcatgctaactgcaccaaggtggcccctggacagaggaca
tgtacctgcaaggaaggctatgctggggatggagaaatttgtttggaaatcaacagctgc
ctgagttggaatggtggctgtcatgccaaggctgattgcgtccccataggatccagcaag
gtatcctgtaattgtggagctggttacactggagacggaatccagagctgtgtgcctttc
aacccctgcacaaaggacaatggaggctgtagcccctatgctacatgtaacaatacagga
cctggagagcggacctgcgcttgtggcattctgaccattggtgatggctttacctgccgg
accaggatgggcttggagctcctccgggacaaggatgcggcatttttcagccactacctg
atggaatatcaggaattgaagggagaggggccattcacagtctttgtccctcgtgaagat
ttgatgaagaaccttacccggagagagctctccatgctcaacacccaccggcagctcctg
ttccgataccacacggtggggtgtgggcgcctgctgacccaggacctgctggaagcagga
tatgtgaccaccctgtccggccacaagctccatttcagccagaatgaggggaatctttac
atcaatgagtatgcccaagtggtgactgaagaccagattggggtgaacggtgtcatccac
ttcattgacaaactgctgctgcccccagaagttgtgcactggaccgatgcgtcctcagtg
cctcccaagcaaaatgtcacagaagcagccgagagcgcgggctacacactcttcagcaag
cttctgacgatggccaggatgctgccgatgttccatgataaagcccaccagcccctcacc
gtcctgtggccctcagacgaagccttgaaagccctctcccccgagcgccaggcctggctc
taccacgaggaccaccgggagaagctggccgccatcttacggggccacgtgatccgcaat
gtcaaggccctggcctccgatatacccaacctgggtcagcttagaacgatgcatggctcc
cccatctccttctcctgtagcaaggccctgccgggtgagctcttggttggcgagggcgaa
gcccggattgtacagcgacacatggagttcctgggaggcattgcctacggcatcgaccag
ctcctggagcccccgggcctgggttcccgctgtgaccactacgtgaaggaacagctaccg
gcctacaggcagccctgtagttcgtgtgacctgctgcccctttgtcctctaggatacaag
gatcagggcgaggtggattactgcatgagggccatcccttcaaggagacctttctttctg
agatacacctactacgacccatttttattctcccgaaagactcagaaatccggctgccgc
cgacgttgttttacagtcacctggaaaccagcgtgttgcccaggacactacggcatcgac
tgccaagtgtgcccaggggggccaggagccccatgtaacggcaatggggtgtgtgacgat
ggaatgacagggacaggagtctgcaagtgccacaagggcttcaatgggactgcctgtgag
ctctgtgctgcagggacatttggtcatcagtgtctaccttgtcagtgcacagcccaagga
aagtgtgatgagggcgtctcaggctctggcttttgcttctgcaatgagggctggagcgga
cagcgctgtgaaataaagctggatgagcagcctgtgtgctccccaccctgccatccccag
gctgtgtgccgaaaagacaacttctgtgaatgcagcctggactatgagggggatggtcgg
aaatgcacagtgattgaccgctgccagaatcagcacggaggctgcagccagcatgccagc
tgcagccagcaggggacagtggtcacctgtacttgcctccctgactacgaaggtgatgga
gtgttctgtcaggcccgggacccctgtgcagatggccagaatggaggctgcagcgagcat
gctgaatgcatcagcactggcccaaacactcgccgttgcatgtgccggcctggctatgtg
gggaatggactgcagtgcctggtggaagctgtgccccctgaagaccgatgcctggagagt
cctgggccctgccacccggaggccacttgcactgacctgcacttccaagagaagcgggct
ggagtgttccacctgcaggctccagaaggcaagtacaggctgaccttcggggaggcagag
aagcagtgcctggcccagggcgctgaactggcttctttggatcaactctcagctgctcag
cagcttggtttccacctgtgcctgacgggctggctatcgaatggtacagctgcctacccc
gccgtctaccccagcaccagctgtaacaccagccacgcgggcatcatcctccgtggaacg
cagggcagccttaccgagcgctgggatgcctactgctaccgtctgcgtgatgtgacctgc
cagtgccgggacggctttgtaggtgatgggtacaccgtgtgtaacggaaagctgctggat
gtactggccgccaatgccaatttctccaccttctatgggttgctgctggattatgccaac
accacgcaacatggtctagaattccttggcttcctatctgatgagctgacctccaagaca
ctcttcgtccccattaattctgggtttgggaacaatctgactctgagctggcaggacttg
gaactccatgcttctaatgtcacctttctgagcttgaacctcagccagggcactatccta
cctgcccactcaggccaccagcttttcatcagcaactcctctgctgggaacagtaccatg
ttcaaggagggcaccgatgtggtgagagtcagtgctgttgtggagtgggatatcatcgcc
ttcaatggcattattcacgccatccagagccccctcacagcgcccccaaaaccgctggca
aggaccgccactgctgtggcagttggcacttgcacggccctgggggcagggctgcttttg
ggcttggcagccctgtatttccaccacaaagtcaaaggccaaggattccagttccactat
ttcaaggctgaagatgacgaggatgacttctcaccctggcaacaagggcccagcccgccc
ctgatctccgtacccaaccccacttttggaggccacgacaccttctatgagccctttgat
aactcgttccgggaagaggagttcccggacacccacagaatccttgaagaggagtag
DBGET
integrated database retrieval system
