KEGG   Monodelphis domestica (gray short-tailed opossum): 100030984
Entry
100030984         CDS       T01031                                 
Symbol
WDR82
Name
(RefSeq) WD repeat domain 82
  KO
K14962  COMPASS component SWD2
Organism
mdo  Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:mdo00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100030984 (WDR82)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mdo03019]
    100030984 (WDR82)
   03036 Chromosome and associated proteins [BR:mdo03036]
    100030984 (WDR82)
Messenger RNA biogenesis [BR:mdo03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     100030984 (WDR82)
Chromosome and associated proteins [BR:mdo03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     100030984 (WDR82)
    COMPASS/SET1 complex (yeast)
     100030984 (WDR82)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WDR55 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_WDR75_1st WD40_RFWD3 NBCH_WD40 WD_LRWD1 Beta-prop_IFT140_1st PEP5_VPS11_N Beta-prop_EIPR1 Beta-prop_NUP159_NUP214 VPS8_N MinC_C
Other DBs
NCBI-GeneID: 100030984
NCBI-ProteinID: XP_001380358
Ensembl: ENSMODG00000011614
UniProt: F6UGV7
LinkDB
Position
6:277013950..277035533
AA seq 313 aa
MKLTDIVLRSFRVAKVFRENSDKINCFDFSPNGETVISSSDDDSIVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHNKRVVALSMSPIDD
TFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSFD
KGPFATFKMQYDRNCEWTGLKFSNDGKLILISTNGSFIRLIDAFKGAVMHTFGGYNNSKA
VTLEASFTPDSQFIMIGSDDGKIHVWNGESGIKVAVLDGKHTGPITCLQFNPKFMTFASA
CSNMAFWLPTIDD
NT seq 942 nt   +upstreamnt  +downstreamnt
atgaagctgacggacatcgtgctgcggagcttccgcgtggccaaggtgttccgggagaac
tcggacaagatcaactgcttcgatttcagccccaatggcgagaccgtcatctccagcagc
gacgacgactccatcgtcctgtacgactgtcaggagggcaaaccaaagagaacactgtac
agtaagaagtatggagtggacctaatcagatacacacatgcagcaaacactgtagtgtac
agttctaacaaaatagatgatacaatccgctacctgtccttgcacgataacaaatacatc
cggtatttcccaggacacaacaagagggtggtagccttgtccatgtcaccaatagatgat
acttttatctctgggtccctggataaaaccatccgactctgggatcttcggtctcctaac
tgccagggcctaatgcatctccaaggaaaaccagtttgttcttttgatccagaagggtta
atttttgctgctggagtcaattctgaaatggttaaactttatgaccttcgttcttttgat
aaggggccatttgctaccttcaaaatgcagtatgataggaactgtgagtggacaggttta
aagttcagcaatgatggcaaactcatccttatatctactaatggcagtttcatccgtctg
attgatgcatttaagggcgcagtaatgcatacatttggggggtataataacagtaaagct
gtcacattggaggcctccttcactccagattctcagtttatcatgattggctcagatgac
ggtaaaattcatgtctggaatggagaaagtggcataaaggtggctgtgttggatgggaaa
catactggtcccataacctgtttgcaattcaatcccaaattcatgacctttgccagtgca
tgttctaacatggcattctggctgcccaccattgatgactga

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