Monodelphis domestica (gray short-tailed opossum): 100030995
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Entry
100030995 CDS
T01031
Symbol
SEMA6D
Name
(RefSeq) semaphorin 6D
KO
K06842
semaphorin 6
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100030995 (SEMA6D)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
100030995
NCBI-ProteinID:
XP_001380368
Ensembl:
ENSMODG00000002842
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Position
1:176175256..176756417
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AA seq
1070 aa
AA seq
DB search
MRPPLLCAYILLITVSQLRAVSFPEDDEPINSVDYHYSRQYPVFRGRPSGNESQHRLDFQ
LMLKIRDTLYIAGRDQVYTVNLNEIPKTEVIPSKKLTWRSRQQDRENCAMKGKHKDECHN
FIKVFVPRNDEMVFVCGTNAFNPMCRYYRLNTLEYDGEEISGLARCPFDARQTNVALFAD
GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI
AVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI
TDIIQINGIPTVVGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPED
KVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPSIIEEPWFTKTRVRYR
LTAIAVDHSAGPHQNYTVIFLGSEAGVVLKILAKTNPFSLNDSVLLEEIDAYNHAKCNAE
SEEDRKVISLQLDQDHHALYVAFSSCVIRIPLSRCERYGSCKKSCIASRDPYCGWLSQGA
CGRVKPGMLAGGYEQDTEYGNTAQLGDCHEILPTSTTPDYKIFGGPTSDMEVSSSSVTTM
ASIPEITPKVIDSWKPKLTSSRKFVVQDEPNTSDFTDPLSGIPKGVRWEVQSGESNQMVH
MNVLITCVFAAFVLGAFIAGVAVYCYRDLFVRKSRKIHKDAESAQSCTDSSGSFAKLNGL
FDSPVKEYQQNIDSPKLYTNLLTSRKELPPNGDTKSMIMDHRGQPPELAALPTPESTPVL
QQKTLQSMKSQSEKAHGASRKDAPQFFPSSPPPHSPLSHGHIPSAIVLPNATHDYNTSFS
NSNAHKAEKKLQNIDHPLTKSSKRDHRRSVDSRNTLNDLLKHLSDPSSNPKAIMGDIQMA
HQTLMLDPMGNMSEVPPKVPNREASLYSPPSTLPRNSPTKRVDVPTTPGVPMTSLERQRG
YHKNSSQRHSISAMPKNLNSPNGVLLSRQPSISRGGYMPATGGGKMDYIQGTPVSVHLQP
SLSRQSSYTSNGTLPRTGIKRTPSLKPDVPPKPSFVPQTTSVRPLNKYTY
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgaggccccccttgctttgtgcatatatactgttaataacagtctcccagttgagggca
gtcagctttcctgaggacgatgaacccattaattccgttgattaccactattcaaggcaa
tatccagtttttagaggacgcccttcaggcaatgaatctcagcacaggctggactttcag
ctgatgttgaaaattcgagacacactttatattgctggcagggaccaggtttatactgta
aacttaaatgaaatccccaaaacagaagtgataccaagcaagaaattaacatggaggtca
aggcaacaggatcgagaaaactgtgccatgaaaggcaagcacaaagatgaatgccacaac
tttattaaagtgtttgttccaagaaacgatgagatggtttttgtctgtggcacaaatgca
tttaatccaatgtgtagatactataggttgaataccttagagtacgatggggaagaaatt
agtggcttggcaaggtgcccatttgatgccagacaaaccaatgttgcactctttgctgat
gggaaactatattctgcaacagtagctgatttcctggcaagtgatgctgtcatttatcgg
agcatgggcgatggatctgccctacgaaccataaaatatgattccaaatggataaaagag
ccacattttcttcatgccatagaatatggaaactatgtttatttcttctttcgagaaatt
gctgtagaacataataatttaggcaaggctgtgtattcccgtgtggcccgtatatgcaaa
aatgacatgggtggctcccagcgggtcctggagaaacactggacttcttttctcaaggcc
cgactcaactgttccgtccccggggattcattcttctacttcgatgtccttcagtccatt
accgacatcatacaaatcaatggcatccctacggtggtcggggtgtttaccacccagctg
aacagtattcctggttcagctgtgtgtgctttcagcatggatgacattgaaaaagtattc
aaaggaaggtttaaagaacagaagaccccagactctgtctggacagcagtacctgaagac
aaagtccccaaaccaaggcctggctgttgtgcaaaacatggccttgcagaggcttataaa
acttccattgatttccccgatgaaaccctgtccttcatcaaatcccatcctttgatggac
tccgccgtcccatccatcattgaagagccctggttcacaaagactcgggtcaggtataga
ttgactgctattgcagtagatcattcagctggaccacaccaaaattacactgtcatattt
cttggctcagaagctggagtagtacttaagatcctggcaaagaccaatcctttctccttg
aatgacagcgtgttattggaagagattgatgcttacaaccatgcaaaatgtaatgctgag
agtgaagaggacagaaaggtcatctctctgcagttggatcaagaccaccatgccctgtat
gtagccttctccagctgcgttattagaattcccctcagccgctgcgagcgttatgggtcg
tgtaaaaaatcttgcattgcctctcgtgacccatactgtggctggttaagccagggagcc
tgtggccgcgtgaagcccgggatgcttgctggaggatatgagcaagacacagaatatggc
aacacagcacaacttggggactgccatgaaattttgcctacttcaactacaccagattac
aaaatatttggcggtccaacatctgacatggaggtatcctcgtcttctgttaccacaatg
gcaagtatcccagaaataacacctaaagtgattgattcctggaaacctaaactgacgagc
tcccggaaatttgtagttcaagatgaaccaaacacttccgattttactgatcctttatca
ggtatcccaaagggtgtgaggtgggaagtacaatctggagagtccaaccagatggtacac
atgaatgtcctcatcacctgtgtctttgcggctttcgtgctgggcgccttcatcgccggg
gtagccgtttactgttaccgtgacttgtttgttcggaaatccaggaagatccacaaagac
gccgaatctgctcagtcctgtacagactccagcgggagctttgccaaactgaacggttta
ttcgatagccccgtcaaggaatatcagcagaacattgattcgcccaaactgtacaccaac
ctcctgactagtcgtaaagagctgccgcccaacggagacacgaagtccatgatcatggac
catcgaggccagcctccggagttggccgcactcccgacgcccgagtctacccccgtcctc
caacagaagaccctccagtccatgaaaagccagtcagagaaggctcacggtgcttccagg
aaagacgcgcctcagtttttcccttctagccctccgcctcactctccgctaagtcacggg
cacattcccagtgccatcgttcttccaaatgctactcatgactacaatacgtctttctcc
aattcgaatgcccataaagctgagaaaaagcttcaaaatattgatcacccactcaccaaa
tcgagcaaaagagatcaccgacgctctgtggactccaggaacactctcaacgatctcctg
aagcatcttagtgaccccagcagtaaccccaaagccatcatgggcgatatccaaatggct
caccagaccctcatgctggatcccatgggaaacatgtctgaggtcccgcctaaggttccg
aatagggaggcctccttgtactctcctccctctaccctcccgaggaatagccccacaaag
cgggtggacgtgcccaccacgccgggggtccccatgacctctctggaaagacaaaggggc
tatcacaaaaactcctcccagaggcattccatatcggcgatgcctaaaaacttaaactca
ccaaatggtgttttgttatcaagacagcctagtattagccgtggaggctatatgcctgcc
acgggaggtgggaagatggactacatccagggaacaccggtcagtgttcatctgcagcct
tccctctccagacagagcagttacaccagtaatggcaccctccctcggacgggcataaag
aggacaccatccttaaaacctgacgtgccaccaaagccctccttcgtccctcagaccaca
tcagtcagaccgctgaacaaatacacctactga
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