Monodelphis domestica (gray short-tailed opossum): 100031069
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Entry
100031069 CDS
T01031
Symbol
TRIM54
Name
(RefSeq) tripartite motif containing 54
KO
K10653
tripartite motif-containing protein 54
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100031069 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mdo04121
]
100031069 (TRIM54)
Ubiquitin system [BR:
mdo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100031069 (TRIM54)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
DUF8512
TRIM_CC
Sina_RING
DUF349
CoiA_N
WHD_3
DUF1421
GH123_cat
Zn_ribbon_FGT1_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
100031069
NCBI-ProteinID:
XP_001380423
Ensembl:
ENSMODG00000015685
UniProt:
F7E1B1
LinkDB
All DBs
Position
1:508553390..508595623
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AA seq
360 aa
AA seq
DB search
MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPNIYKRQKSELSDGIAM
LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLGQRFETLCAVLEERKAELLQALALEQE
EKLQRVRGLIRQYGDHLESSSKLVESAIQSMEEPQMALYLQQAKELIKKVGDMAKVELAG
RPEPGYESMEQFSVNVEHVAEMLRTIDFQTGGSGEEEEDELVLEGEDGSAAGAEEERLEA
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcacagtgggtttcaagccgctgctgggagatgcacacagcatggataacctg
gagaagcaactcatctgccctatctgcctggagatgttctccaagccagtggtgatcctg
ccctgccaacacaacctatgccgaaagtgtgccaatgacgtcttccaggcctcaaatcct
ctgtggcaatcccggggttccaccacagtgtcctcagggggacggttccgctgcccatcc
tgtaggcatgaggtggttcttgacagacatggtgtctatggactgcagcgcaacctgctg
gtggaaaacatcattgacatttacaaacaagaatcttcaaggcccttgcattctaaggca
gagcagcatctaatgtgtgaggagcatgaggaagagaagattaacatctattgcctgagc
tgtgaagtgcccacctgctccctctgcaaggtgtttggagctcataaggattgtgaagtg
gcaccactgcccaacatctacaaacgacagaagagtgaactgagtgatggcattgccatg
ctggtggctggaaacgaccgagtccaggcagtcattactcagatggaagaggtgtgccag
actattgaagataacagccgcaggcagaagcaactcttgggacagagatttgagacatta
tgtgcagtgctggaggagaggaaggctgagctgcttcaagccctggctctggagcaggaa
gagaagcttcagcgggttcgaggactcattcgtcaatacggagaccacttggagtcctcg
tccaaacttgtggagtctgccattcagtctatggaggagccacagatggctctctaccta
cagcaggccaaggagctgattaaaaaggttggggacatggcaaaggtggagttggctggg
cggccagagccaggatatgaaagcatggaacagttctcagtgaatgtggagcacgtggct
gagatgcttcggacaattgacttccagactgggggttctggggaggaagaagaagatgag
ttggtgctggaaggggaagatggcagtgctgctggggctgaggaagagagactggaggct
taa
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