KEGG   Monodelphis domestica (gray short-tailed opossum): 100031229
Entry
100031229         CDS       T01031                                 
Symbol
RRP9
Name
(RefSeq) ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)
  KO
K14793  ribosomal RNA-processing protein 9
Organism
mdo  Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:mdo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mdo03009]
    100031229 (RRP9)
Ribosome biogenesis [BR:mdo03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    100031229 (RRP9)
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_TEP1_2nd WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_EML EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 NBCH_WD40 Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_DCAF12 Beta-prop_IP5PC_F Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_DCAF4 Beta-prop_HPS5 PEP5_VPS11_N Beta-prop_WDR75_2nd Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_RIG_2nd WD40_like Beta-prop_RIG_1st WDR54 Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 100031229
NCBI-ProteinID: XP_007500583
Ensembl: ENSMODG00000011815
LinkDB
Position
6:277812989..277835339
AA seq 474 aa
MSATVSSGKRGKLTGSGAGKRRRKTDVDGEPTRTKVGTKKRPKLSEEISSDSEPESPEDT
RKKEEEDEELEETAQEKKLRLAKLYLEQLRQQEEEKAEEEAFGDDQVAGRLKEDVLEQRG
RLQKLVAKEIQAPVAADIRVLRGHQLPITCLVITPDNSAIFSGAKDCTIIKWSVASGKKL
HRIQRVKKGTEGQPAGHTDHILCMAISSDGKYLATGDKNKLILIWAVDTCKHLYTFTGHR
DAVSGLAFRKGTHQLYSTSHDRSVKVWNVAENAYIETLFGHQDAVTALDGLSRESCVTAG
GRDGTVRVWKIPEESQLVFYGHQGSIDCIQLINEEHMISGSEDGSLALWGLSKKRPLTVQ
QKAHGMRGEEGLEQPYWVSSVTALLNTDLVASGSHSSFVRLWQCAEGFRRLEPLWDIPLV
GFINSLKFSSTGDFLVAGVGKEHRLGRWWQIKDAKNSVCIIPLRRVPPAPAAGS
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgtctgctactgtatcctcaggaaagcgggggaagctgacaggctcgggtgcagggaag
cggcggcggaagaccgacgtagacggggagccaacccggaccaaagtgggcaccaagaag
agaccaaagctgagcgaggaaatttccagcgactcggagccagagagccctgaggacaca
agaaagaaggaagaggaagatgaggagctggaagagactgcccaggagaagaagctccgg
ctagccaagctttacttagagcagttgagacagcaagaggaggaaaaagctgaagaagag
gcctttggcgatgaccaagtggctgggcggctaaaggaggatgtgcttgagcagaggggt
cgacttcagaagctggtggcaaaggagatccaggccccagtggctgcagacatacgggtg
cttcggggccaccagctgcccatcacatgcctggtcatcacccctgacaactcggccatc
ttctctggagccaaagactgcaccattatcaaatggagtgtagcaagtgggaagaagctg
catcggattcaaagggtgaagaagggaactgagggccagccagccgggcacactgaccac
atcctctgcatggccatctcctcagatggcaaatacctggccacaggagacaagaataaa
ctcatcctgatctgggcagtagatacctgcaagcacctctataccttcacaggacaccgg
gatgcagtgtcgggcctggcatttcggaagggcacccaccagctgtacagcacatcccat
gaccgctctgtgaaggtgtggaacgtggccgagaatgcctacatagagaccctttttggc
caccaggatgctgtgacggccctggatggactgagccgggagagctgtgtgacagcaggt
ggccgtgatggcactgttcgtgtctggaagattccagaggagtcacagttggtcttctat
ggccaccaaggctccattgactgcatccagcttatcaatgaggaacacatgatatctgga
tcagaggatggctcgttggctctgtggggcctctccaagaagcggcccctcactgtgcaa
caaaaagcccatgggatgcgtggagaagagggcttggagcagccatactgggtgtcatcg
gtgacagcactgctcaacacagacctcgtggcctcaggatctcacagctcctttgtgcga
ctctggcaatgtgcagagggtttccggaggctagaaccactctgggacatccctctggtt
ggcttcatcaacagcctcaaattctccagtaccggagacttcctggtagcaggtgttggg
aaggaacacaggttgggacgctggtggcaaatcaaagatgccaagaactcagtctgcatc
atccccttgcggagagtccctcccgccccagctgctggctcttaa

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