Monodelphis domestica (gray short-tailed opossum): 100031302
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Entry
100031302 CDS
T01031
Symbol
CSTF3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100031302 (CSTF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdo03019
]
100031302 (CSTF3)
Messenger RNA biogenesis [BR:
mdo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
100031302 (CSTF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
100031302
NCBI-ProteinID:
XP_007497298
Ensembl:
ENSMODG00000009745
UniProt:
F6X9G6
LinkDB
All DBs
Position
5:complement(268798906..268877626)
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AA seq
717 aa
AA seq
DB search
MSGDGAAEQAAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQ
FPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQY
LEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVH
SIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDTRTRHHVYVTAALMEY
YCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEK
SGEIWARFLAFESNIGDLASILKVEKRRFTAFKEEYEGKETALLVDRYKFMDLYPCSASE
LKALGYKDVSRAKLATIIPDPVVAPSIVPVLKDEVDRKPEYPKPDTQQMIPFQPRHLAPP
GLHPVPGGVFPVPPAAVVLMKLLPPPVCFQGPFVQVDELMEIFRRCKIPSTVDEAVRIIT
GGVPDLAVEGNGPVESSAVLTKAVKRPNEDSDEDEEKGAVVPPIHDIYRARQQKRIR
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcgacggagccgcggagcaggctgctgaatatgtaccagaaaaagtgaagaaa
gcagaaaagaaattagaagagaatccatatgaccttgacgcttggagcattctcattcga
gaggcacagaatcaacctatagacaaagcacggaagacatatgaacgccttgttgcccag
ttccccagttctggcagattctggaaactgtacattgaagcagagattaaagctaaaaat
tatgacaaggttgaaaagttatttcaaagatgccttatgaaggttttacatatagatttg
tggaagtgttacctttcatatgtcagagaaaccaagggaaaactacccagttacaaagaa
aaaatggcacaagcatatgactttgctttggataaaattggaatggaaattatgtcttat
cagatttgggtggattacatcaatttcttgaaaggcgtggaagccgttggatcctatgca
gaaaatcaaagaataacagctgtccgaagagtttatcaacgaggttgtgttaatccaatg
atcaatattgagcagctttggagggactataataaatatgaagagggtatcaacatacat
ctagctaaaaaaatgattgaagacaggagtagagattacatgaatgccagacgtgtagca
aaggagtatgaaactgtaatgaaaggtctagaccgcaatgccccatcagtacctccacag
aatactccccaagaggctcagcaagtggacatgtggaagaaatacatccagtgggagaag
agcaacccgttgcgaactgaggaccagacactcataacaaaaagagtgatgtttgcatac
gagcagtgcctgctggtgctgggccatcacccggacatttggtatgaagctgctcagtac
ctggagcagtccagtaagctgctggctgagaaaggggacatgaataatgctaaattattt
agcgatgaagctgctaatatatatgagagagctattagcactttactgaagaaaaatatg
cttctttattttgcatatgcagattatgaagagagtcgaatgaaatatgagaaggtgcat
agcatttacaatcgacttctggctattgaagatattgatcctaccctggtatatattcaa
tatatgaagtttgcaaggcgagcagaaggtatcaaatctgggagaatgatatttaagaag
gcaagagaggatactagaacgcgccatcatgtttatgttactgcagcattaatggaatac
tactgtagtaaggataaatcagtggcctttaagatatttgaactggggttaaaaaaatac
ggggacattccagaatatgtattagcctatattgactacctgtctcacctcaatgaagac
aataatacccgagttttgtttgaacgagtattgacctctggaagccttccacctgagaaa
tctggagaaatatgggcccgattcctcgcttttgaaagtaacatcggtgatcttgctagt
atcctgaaagtggagaaaagacggttcacagccttcaaggaagaatacgaaggcaaggaa
accgcattgctggtcgataggtacaagttcatggatttgtatccctgctccgccagtgaa
ctgaaggctctcggctacaaggatgtctctcgggccaagctggcaaccatcattcctgac
ccggtggtggctccctccatagtgcccgtcctgaaagacgaagtggaccgaaagcccgaa
taccccaagccggacacgcagcagatgatccccttccagccgagacacttagcgcccccc
ggcctccaccccgtgcccgggggagtgtttccggtgcctcccgccgccgtggtattaatg
aagctcctccctccccccgtctgtttccagggcccttttgtgcaggtggatgagctgatg
gagattttccgaagatgcaagatcccgagcactgttgacgaggcggtcaggatcatcacc
gggggggtgccggacctggccgtggaagggaacggccccgtggagagcagcgccgtgctc
accaaggcggtcaagcggcccaacgaggactcggacgaggacgaggagaagggcgccgtg
gtgccgcccatccacgacatctacagagcccggcagcagaagaggatccggtga
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integrated database retrieval system
