Monodelphis domestica (gray short-tailed opossum): 100031364
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Entry
100031364 CDS
T01031
Symbol
DDX21
Name
(RefSeq) DExD-box helicase 21
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mdo03009
]
100031364 (DDX21)
03036 Chromosome and associated proteins [BR:
mdo03036
]
100031364 (DDX21)
Enzymes [BR:
mdo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100031364 (DDX21)
Ribosome biogenesis [BR:
mdo03009
]
Eukaryotic type
Pre-60S particles
Helicases
100031364 (DDX21)
Chromosome and associated proteins [BR:
mdo03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
100031364 (DDX21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
100031364
NCBI-ProteinID:
XP_007505939
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Position
Un
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AA seq
826 aa
AA seq
DB search
MPGKLLSETEIESEAVMEAAEQTRKHKHKKDKKEKSKNDKLEKEPQEETEELDSPKPKKV
KRGEEVISPKPKKAKKKEQLPEDEEDSSPKPKKAKKSEEGSVDEPKSLKERGGASTDEVS
PKAKKTKKKEVPSENESPLKPKKTKKKDREVNGDTGEKRPKLEKVKVSNGLSHSKQASDS
EESSDEESHSEEEQENHLPKGLESHTLSSKALKSQLPAGLTKQVKEEEEEEEDDDDDDDD
DEDEDQELENPKKDKKKENEKDSNAEDTEELSAEQKEGAFSNFPISEETIQLLKARGVTY
LFPIQAKTFHHVSSGKDLIAQARTGTGKTFSFAIPLVEKLQGDSQPRPRGRAPKILVLAP
TRELSIQVSKDFSDITKKLTVACFYGGTPYNGQIDLIRRGIDILVGTPGRIKDHLQNGRL
DLTKVQHVVLDEVDQMLDMGFAEQVEEILTVAYKKDSEDNPQTLLFSATCPHWVYDVAKK
YMKSTYEQVDLIGKKTQKAAVTVEHLAINCHWSQRAAVIGDVIQVYSGSHGRTIIFCETK
KEAQELSLNESIKQDAQSLHGDIPQKQREITLQGFRNGKFGVLVATNVAARGLDIPEVDL
VIQSSPPKDVESYIHRSGRTGRAGRTGICICFYQKKEQHQLAQVERQAGITFKRVGVPSA
SEIIKASSKDAIRFLDSVPPAAINNFRQTAQKLIDEKGAVEALAAALAHISGATTVEQRS
LINSDVGVCFDVPAAEVKSFQDNWQDSRRWQLSVATERPELEQQPDEGRGFSNFRSGGGR
GGRGGGRGGGGRGGGGRGGRSGGFNRNDKFQNRGQKRSFQRAFSHR
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgccggggaagcttctctcagagaccgagatcgaatcggaggcggtcatggaggcggcg
gagcagacgcggaaacataagcataagaaagataaaaaagagaaatcaaaaaatgataaa
ctggaaaaggagccccaggaagagactgaggagcttgactcacctaagcccaagaaggta
aaaaggggggaagaagtcatttctccaaagcctaaaaaggctaagaagaaagaacaactc
ccagaggatgaggaagactcttctcctaaaccaaaaaaggccaaaaagagtgaggaaggg
tctgtggatgagcccaaaagcctgaaagagagagggggggcttctacagatgaggtcagc
cctaaggccaaaaagactaaaaagaaagaggtgccttctgaaaatgaaagccccctgaag
cctaagaagaccaagaagaaggacagagaagtaaatggagacactggagaaaaaagacca
aaactagagaaggtgaaagtaagtaatggactgtcccactccaaacaggcatctgattct
gaggagtcctccgatgaagaaagtcacagtgaggaggagcaggaaaatcatcttcctaaa
ggattagaaagccacacccttagttctaaagcattaaaatcccagttgccagctggactg
acaaaacaggtcaaagaagaagaagaagaagaagaagatgatgatgatgatgatgatgat
gatgaagatgaagaccaagagttagagaaccccaaaaaagacaaaaagaaggaaaatgag
aaagattctaatgctgaagacactgaggagttatctgcagagcagaaagaaggcgctttc
tctaattttcccatctctgaagaaacgattcaactcctcaaagcccgaggagtgacctac
ctgtttcctatacaagcaaagacgtttcatcatgtgtctagtgggaaggacttaatcgct
caagcccggacaggaacggggaagacgttctcttttgccatccccttagttgaaaaactt
cagggagattctcagccccgaccaagaggccgtgcaccgaagatcctggtcctcgcgcct
acaagggagttgtcgatccaagtcagcaaagacttcagcgacatcaccaagaagttgacg
gtggcttgtttctatggtggaacaccctataatggccagattgatctcattcggagaggg
atcgacatcttggtgggcaccccaggtcgcatcaaagaccatttgcagaacggccggctg
gatctcaccaaggtgcagcatgttgtgctggatgaagtggaccagatgttggacatgggc
tttgctgagcaggtggaagaaattttaactgtggcttataagaaagattcggaagacaac
ccccagacgttgcttttttctgcaacttgtcctcactgggtgtatgatgtggccaagaaa
tacatgaaatccacttatgaacaagttgaccttattgggaagaagacacagaaagctgcg
gtgactgtggagcatttggccatcaactgccactggtctcagagggcagcagtcattggt
gacgtcatccaggtctatagcgggagtcatggacggaccattattttctgtgagacaaag
aaggaagctcaggagctctctttgaatgaatcaataaagcaggatgcccagtcattgcat
ggagatattccgcagaaacaaagggaaattaccctccagggtttccggaatggtaaattt
ggtgtcctagtggcgactaatgtggctgctcggggcttagatatccctgaggttgatctg
gttatacagagttctcctccaaaggatgtagagtcctacattcatcgttctggacgtaca
ggccgagctggtcggactggaatctgcatttgcttttatcagaagaaggagcagcaccaa
ctggcacaggtggaacggcaggcggggatcacattcaagcgcgtgggtgttcctagtgct
tctgaaataattaaagcctccagtaaagacgccatcaggtttttggattcggtgccccct
gcggccattaacaacttcaggcagacggctcagaaactgattgatgaaaagggggctgtg
gaagccctggctgcagcattagcccatatctcgggggccaccactgtagaacagcgttcc
ctgatcaactcagatgtgggtgtttgctttgatgtccctgctgcagaagtaaaatcattc
caggataattggcaggactcgaggcgctggcagctctctgtggccacagagagacccgag
ttggagcagcagcctgatgaaggcaggggcttctctaatttccggagtggtggtggccgt
ggtggccgaggcggtggccgcggtggtggtggccgaggcggtggtggccgaggtggccgg
agtggtggtttcaacaggaatgacaaatttcaaaacagaggccagaagcgaagttttcag
agagcattttctcaccgttag
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