Monodelphis domestica (gray short-tailed opossum): 100031895
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Entry
100031895 CDS
T01031
Symbol
COL14A1
Name
(RefSeq) collagen type XIV alpha 1 chain
KO
K08133
collagen type XIV alpha
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100031895 (COL14A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mdo00535
]
100031895 (COL14A1)
Proteoglycans [BR:
mdo00535
]
Extracellular matrix (ECM) proteoglycans
Others
100031895 (COL14A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
VWA_3
fn3_2
Motif
Other DBs
NCBI-GeneID:
100031895
NCBI-ProteinID:
XP_007488514
Ensembl:
ENSMODG00000003690
LinkDB
All DBs
Position
3:393567299..393803387
Genome browser
AA seq
1629 aa
AA seq
DB search
MKSFQGKTWFWLLPVLGAIVHFSSSVKGQVAPPTRLRYNILSHDSIQIQWKAPKGKFSGY
KLLVTPTSGGKTNQLTLQNTANKAIIQGLIPDQTYAVQLIAFDKDKESKPAQGQFRINDL
EKRKEPKPKEPKPKGNGSKPSLPTEGNTFVCKTPAIADIVILVDGSWSIGRFNFRLVRLF
LENLVTAFNVGANKTRIGLAQYSGDPRIEWHLNTFSTKDAVIDAVRNLPYKGGNTLTGLA
LNYIFENSFKPEAGARTGVSKIGILITDGKSQDDIIPASKTLRDSGVELFAIGVKNADVA
ELQEIASEPDSTHVYNVAEFDLMHTVVEGLTKTVCTRVEEQEKEIRGSRVTNIGPPTDLV
TSEVAARSFRVTWTPAPGEVEKYRVVYYPTRGGKPEEVVVDGTESTTILKGLMSLTEYQI
AVFAIYSTTASEGLRGTEMTLALPMASNLELYDVTENSLRVRWNAVPGASGYMILYAPLT
EGLAGDEKEMKIGETLTDIQLKGLLPNTEYTVTVYAMFGEEASDPVTGQEMTLPLSPPRN
LRISNVGANSARITWDPTSKNVNGYLISYTTSSGTETNEVEVDGVSTYSLKGLTSLTDYN
VAIFSIYEEGQSEPLMGSFTTKQVPAQQYLEIDEVSEDSFRVSWKPLSLDVAKQKLMWMP
VYGGKVEQVVLNEDQDTYVIEGLQPGTEYEVSLLAVLSDESETEVLSVFGTTLEGPSTIP
PVTTVSPTGPVTTVFRTGIRNLVVDDESTSSLRVKWDISDNRVEQFRVTYLTAKGDHAEE
VIGTVMVPGKQNQLLLKPLLSDTEYKVTVTPIYSDGEGVSVSAPGKTLFLGVTDLEAERI
QPHSLCVKWKLHSHASAYRVSIEELRDGNKQETALGGGTSSHCFYGLLADSEHKISVSTQ
LQEITGPSVSIMERTRPIPTPPPATTTPLPTVPPAKEVCKAAKADLVFMVDGSWSIGDDN
FNKIINFLYNTVGALDKIGVDGTQVSIVQFTDDPRTEFMLNTYKTKDTLLEGIKNLSYKG
GNTKTGKALKHVRDALFTAEGGTRRGIPKVIVVITDGRSQDDVNKISRELQLEGISIFAI
GVADADYAELVSIGSQPSARHVFFVDDFDAFKKIEDELITFVCETASATCPLVNKDGNSL
AGFKMMELFGLVEKDFSAVEGVSMGPGTFNVYPCYQLHKDALVSQPTKYLHPEGLPSDYT
ISFLFRILPDTPQEPFALWEILNKDSDPLVGVILDNGGKTITYFNYDYQGEFQTVTFEGP
EIKKIFYGSFHKMHIVISKTLAKVFIDCKQVGEKAVNASGNITSNGVEVLGRMVRSRGPK
DNSAPFQLQMFDIVCSTSWASRDKCCELPGLRDEENCPALPHTCSCSEISKGASGPVGPP
GGPGLRGPKGQRGDQGPKGPDGPRGEAGSPGPQGPPGPQGPSGLSIQGMPGAPGEKGEKG
DLGFPGPQGIPGSTGSPGRDGSQGQRGLPGKDGPTGPSGPPGPIGIPGAPGVPGITGSTG
PQGDLGPPGLPGAKGERGERGDLQSHAMVRAVARQVCEQLIQSHMARYNSILNQIPSHSS
SIRTVPGPPGEPGRQGSPGTPGEQGPPGRPGFPGNPGQPGTPGERGRLVLNKPMKYNHSL
VLSVTALSP
NT seq
4890 nt
NT seq
+upstream
nt +downstream
nt
atgaagagttttcaaggcaagacctggttctggctgcttccagttttgggggcaattgtc
catttctccagttctgtcaagggtcaagtggctccaccgacaagattaagatataacata
ctatctcatgacagtattcagatccaatggaaagctcccaaagggaaatttagtggatac
aaacttcttgtaactccaacttcaggtggaaaaaccaaccaactgactcttcagaatact
gcaaataaagccatcattcaaggtcttataccagatcagacttatgcagtacaacttatt
gcatttgataaagacaaagaaagtaaacctgcccaaggccaattcagaattaacgattta
gaaaaaagaaaagaacctaagcctaaagaaccaaagcccaaaggcaatggaagtaaacca
tctctaccaacagaaggaaacacatttgtttgcaagacaccagccattgctgatattgtg
attctggtggatggttcatggagcattgggagattcaacttcagactggttcgccttttc
ttggaaaacttggtgactgcattcaatgtgggagcaaataaaactcgaataggccttgca
caatacagtggtgaccctcgaatagaatggcacctgaatacctttagtaccaaggatgca
gtgatcgatgctgtccggaatctaccatacaagggaggaaacaccttaacaggtcttgcc
ttaaattacatttttgaaaatagttttaaaccagaagcaggagctaggactggagtatcc
aaaattggcatcttgatcacagatggaaagtctcaagatgacattatccctgcatcaaaa
actctacgtgattctggtgttgaactctttgccattggtgtgaaaaatgcggatgtagct
gaactacaggagattgcttcagagcctgacagcactcatgtctacaatgttgctgagttt
gacctaatgcacacagttgtggaaggcctgacaaaaacagtttgcaccagagttgaagaa
caggaaaaagaaatcagaggttcacgtgtgaccaacattggacctcctacagatttggtc
acgtccgaagttgctgccagaagctttagagttacctggactcctgctccaggagaagtg
gaaaaatatagagttgtctattatccaactagaggtggaaaaccagaggaggtggtagta
gatggaactgaatcgaccacaatactgaagggattgatgtctttaacagagtatcagata
gctgtgtttgcaatatatagtaccactgccagtgaaggccttcgaggaactgagatgaca
cttgctctgcccatggcatcaaatcttgaactgtatgacgtgactgagaacagcctgagg
gtcagatggaatgcagtgcctggtgcatcaggatacatgatcctctatgctcctctcact
gaaggactggctggggatgagaaagagatgaaaatcggagagacactcacagatattcag
ctgaaaggattattgccaaataccgaatacacagtgacagtatatgccatgtttggagag
gaagcaagtgatcctgttacagggcaggagatgacattgcctttaagtccaccaagaaat
ctgagaatttctaatgttggagctaacagtgctagaataacatgggatcctacttcaaaa
aatgtcaacggttacctcatttcatataccacaagtagtggaactgaaaccaatgaggtt
gaagttgatggtgtttccacatattcactgaaaggcttgacatccctcactgactataat
gttgccattttttccatctatgaggaagggcagtctgagcctctgatggggagtttcacc
acaaaacaagttccagcccaacagtatctggagattgatgaagtatcagaagatagtttt
agagtgagttggaagccgttatctcttgatgttgccaagcagaaattgatgtggatgcca
gtatatggtggaaaggttgaacaggttgtcttaaatgaagatcaagatacatatgttatt
gaaggactacaacctggcacagagtatgaagtttctctgttggcagtactcagtgatgaa
agtgagacagaagtgttgagcgtttttggaactacacttgaaggtccttcaacaatacct
cctgtcactactgtgtctccaactggcccagtaactacagttttccgaacaggaatcaga
aacctggttgtagatgatgaatctacttctagccttcgggtaaaatgggacatttcagac
aacagagtggagcagttcagggtgacctacctaactgctaaaggggaccatgctgaagaa
gtgataggaacggttatggtgccaggaaaacagaaccaacttcttctcaagcctctgctg
tcagatactgaatacaaagtcactgtgactcccatctattctgatggtgaaggggtcagt
gtgtcagctcctggaaaaaccttgttcctgggagtgacagatcttgaagcagaaagaatt
cagccacacagtttgtgtgtcaagtggaaacttcacagtcatgcttctgcctacagggtc
tccatagaggagctcagagatgggaataagcaagaaactgccttgggtggtgggacatct
agccattgtttctatggacttttggctgattcagagcataaaatcagcgtttctacgcag
ctccaagagataacaggacctagtgtaagcataatggaaagaacacggccaatcccaact
ccgccaccagcaacaaccacacctcttccaaccgtacctccagcaaaggaagtttgcaaa
gctgccaaggcagacctagtgttcatggtggatggatcctggagcattggagatgacaac
ttcaataagatcattaactttctatataatacagttggtgccctggacaagattggagtg
gatggaactcaagtgtccattgttcagttcactgatgaccccagaacagaatttatgcta
aatacatataaaaccaaagacactctccttgaggggattaagaatctttcctacaaagga
ggaaatacaaaaacaggaaaagcacttaagcatgttcgagatgccttgtttactgctgaa
ggaggaacaagaagaggcattcccaaagttattgtggtcattactgatgggcgatcacag
gatgatgtaaataaaatttccagggaattgcaactagaaggcatcagcatttttgcaatt
ggtgtggctgacgcagattatgcagaactggttagcattggcagccagcccagtgcaaga
catgtcttctttgtcgatgactttgatgcctttaagaaaattgaagatgagctgattact
tttgtctgtgaaaccgcatctgcaacttgccctctggtcaataaggatggcaacagtctt
gcaggatttaaaatgatggaactctttggtttagttgaaaaggatttttcagctgtggaa
ggggtttctatgggacctggcactttcaatgtgtatccatgttaccagctacataaagat
gctctggtttcccagcctaccaaatatttgcacccagagggattaccttcagattacacc
atctcttttctattccggatattgcctgatactcctcaagaaccatttgctctctgggaa
attttaaataaggattctgacccacttgttggagtcatcttagacaatggaggcaagaca
attacctacttcaattatgattaccagggggaatttcaaaccgttacctttgaagggcct
gaaattaagaaaatattctatggaagtttccacaagatgcatattgttattagtaagacc
ttggccaaagtgtttattgactgcaagcaagtgggtgaaaaagcagtaaatgcatcgggc
aatataacttccaatggtgtggaagtcctagggagaatggtcagatcaagaggaccaaag
gacaactctgcaccattccagctacaaatgtttgacattgtttgttctacatcatgggcc
agtagagacaaatgctgtgaactcccaggactgagggatgaggaaaactgcccagctctt
ccacatacctgttcctgttctgaaatcagtaaaggggcatcaggacctgtcggcccacct
ggtggtccaggactccgaggaccaaagggccagagaggtgaccagggtccaaagggacca
gatggtcctcgtggtgaagcaggttctccaggaccccagggtcctcctggccctcaagga
ccaagtggactttccattcaaggcatgccgggagcaccgggggaaaaaggagagaaggga
gatcttggttttccaggtccacagggtattccagggagtactgggtcaccaggacgtgat
ggttcccaaggccagaggggcctgcctggtaaggatggacccactggcccctcaggacct
cctggaccaatcggtatcccaggagcaccaggagttccaggtatcacaggaagcactggc
ccacaaggtgacctaggacctcctggtcttcctggagcaaagggagaaagaggggaacgg
ggtgatttgcagtctcatgccatggttcgtgcagtggctcgccaagtgtgtgaacagctc
atccagagtcacatggccaggtacaattctattctcaaccagattccaagtcattcttca
tccattcggactgttcctgggcctcctggggagccaggaagacaaggttctcctggtact
cctggtgaacaaggacctccaggccgaccaggcttcccagggaacccaggccaaccaggg
accccaggagaaagaggtaggttggttctaaataagccaatgaaatataatcattcactg
gtcctgtctgtgactgctctgtcaccctga
DBGET
integrated database retrieval system
