Monodelphis domestica (gray short-tailed opossum): 100031927
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Entry
100031927 CDS
T01031
Symbol
SNTB1
Name
(RefSeq) syntrophin beta 1
KO
K24064
beta-syntrophin
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04820
Cytoskeleton in muscle cells
mdo05410
Hypertrophic cardiomyopathy
mdo05412
Arrhythmogenic right ventricular cardiomyopathy
mdo05414
Dilated cardiomyopathy
mdo05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100031927 (SNTB1)
09160 Human Diseases
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
100031927 (SNTB1)
05412 Arrhythmogenic right ventricular cardiomyopathy
100031927 (SNTB1)
05414 Dilated cardiomyopathy
100031927 (SNTB1)
05416 Viral myocarditis
100031927 (SNTB1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
100031927
NCBI-ProteinID:
XP_001381064
Ensembl:
ENSMODG00000002274
UniProt:
F7CVW1
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All DBs
Position
3:complement(394023915..394360404)
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AA seq
571 aa
AA seq
DB search
MAVAAAAAAAATAAAAASAAPAGGGGGRGQRSGLLEVLVRDRWYKVLVNLNEDALILSSE
EGAGAYNGIGGGGGATNGSFCRSTGGGASGHGPGGTGGSSLAGSGNQSLDTPAPPSGGSP
QVGVRTAFTDLPDQVPESIANQKRGVKVLKQELGGLGISIKGGKENKMPILISKIFKGLA
ADQTQALYVGDAILSVNGADLRDATHDEAVQALKRAGKEVLLEVKYMREATPYVKKGSPV
SEIGWETPPPESPRLGSTNSDPLSPLSLSFHRDKKCIPLKMCYVTRNMALNDPEDRHLEI
HSPDAKHTVILRSKDSATAQAWFNAIHGNVSDLLTRVIAEIKEQLGKSGIPGSREIRHLG
WLAEKVPGENEKHWKPALVMLTEKDLLIYDSMPRMKEAWFSPVHTYPLLATRLVHSGPGK
GSPQAGMDLSFATRTGTRQGIETHLFRAETSRDLSQWTRSIVQGCHNSAELITEITTSCT
YKNQECRLTIHYEHGFSISTEPQEGAFPKTIIQAPYEKLKMSSDDGIRMLYLDFGGKDGE
IQLDLHSCPKPIVFIIHSFLSAKITRLGLVA
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagcagcagcagcagcagcagcagcaacagcagcagcagcagcctcggcagcg
ccggctgggggaggcggcggccgggggcagcggagcgggctgctggaagttttggtgcgg
gatcgctggtacaaagttctggtgaacttgaacgaggacgccctgatcctgagcagtgag
gagggcgccggggcttacaacggcatcgggggcggcggcggagccaccaatggctctttc
tgccgtagcactggcggaggagccagtggccatggcccggggggtactggaggcagcagc
ttggctggaagcgggaaccagtccctagatacccccgctcctccgagcgggggaagcccc
caagtgggagtccgcaccgcgttcactgacctgcccgaccaagtgcccgagtccattgcc
aaccagaagcgaggcgtaaaggtgttgaagcaggagctcggggggctgggtatcagcatc
aaggggggcaaagagaacaagatgcccatcctcatcagcaagatcttcaaggggctggct
gctgaccagacccaggccttgtacgtgggggacgcgatcttgtctgtgaatggagccgac
ttgagggacgccacccacgacgaggcagttcaggcgctcaagagagcgggcaaagaggtg
ttgttggaagtgaaatacatgcgagaagcaactccctacgtgaaaaagggttctccagtg
tctgagattgggtgggagactcccccacctgaatccccacgattaggaagcaccaactcg
gatccactgtcgccactttccctctcatttcacagagacaaaaaatgcatccctctcaaa
atgtgctacgtgactcggaacatggctctgaatgatcctgaagacagacatcttgaaatc
cattcacctgatgctaagcacactgtcatccttcggagcaaagactcggccacagcccag
gcatggttcaatgccatccatggcaatgttagcgacctgcttacaagggtcatcgcagag
atcaaagagcagctggggaagagtggcatccctgggagccgagagatcagacatctaggc
tggcttgccgaaaaggtgccaggagagaatgaaaagcactggaagccagccttggttatg
ctgactgagaaggacctcttaatctatgacagcatgcctcggatgaaggaggcctggttc
agccctgttcatacataccctctgctggctaccaggttggtccattcaggtcctggaaaa
ggatcaccacaggctggaatggatctgtcctttgcaactcggactggtaccaggcaagga
attgaaacccatctcttcagagcagagaccagcagggacctctcccagtggacaagaagc
atcgtccagggctgccacaactcagcagaactcataacggaaatcaccacctcatgcaca
tacaaaaaccaagagtgccgtctgaccatccattatgagcatggattctccatcagcaca
gagccacaggagggtgccttccccaagacaatcattcaggctccctatgaaaagctcaaa
atgtcttcagatgatggaatcaggatgctttatttagactttggaggaaaggacggagag
attcagttggaccttcactcctgccccaagcctatcgtgttcatcattcattccttcttg
tcggctaagattacaaggcttgggttggtggcataa
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