Monodelphis domestica (gray short-tailed opossum): 100032021
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Entry
100032021 CDS
T01031
Symbol
COL23A1
Name
(RefSeq) collagen type XXIII alpha 1 chain
KO
K24355
collagen type XXIII alpha
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100032021 (COL23A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mdo00536
]
100032021 (COL23A1)
Glycosaminoglycan binding proteins [BR:
mdo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100032021 (COL23A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
100032021
NCBI-ProteinID:
XP_007474224
Ensembl:
ENSMODG00000004172
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All DBs
Position
1:complement(383658245..384150141)
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AA seq
543 aa
AA seq
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MGAWEPGARKGGPAGAPAYPAWGSAAALALSALCLLLSLGSVAACLLLSARATELQGRVS
ALEEEQQQRQRRTGWGSPETPGDLISWAESHLERLLKEKLEGEAKLRKVREVLPECLCPP
GPPGRRGKPGRRGDTGPAGQAGRDGYPGPLGLDGKPGLPGPKGEKGEPGHFGPRGDRGQD
GATGPPGPPGPPGARGPPGDTGKDGPRGLQGMDGLKGEPGPEGGMGPKGPPGLKGEPGMP
GRKGDDGLPGQQGLQGSIGPKGEEGSPGPQGKNGTDGPPGAKGEPGERGSDGFLGPRGPP
GVKGEQGDTVVIDYDGRILDALKGPPGPPGPPGPAGSPGAKGELGLPGPPGVDGEKGPKG
SKGDQGQPGLMGPKGEIGEMGLSGPPGVDGPKGEKGESGSASLQESLAQILAEPGPPGLP
GPPGPMGLQGIQGPKGLDGAKGEKGATGEKGSNGLLGPAGPPGLIGLPGTKGEKGRPGEP
GLDGFPGPRGEKGERSKQGEKGDRGVPGRKGAKGQKGEPGPPGLDQPCPVGADGLPVAGC
WHK
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcgtgggagccgggcgcccggaaaggcggccctgcgggggctcccgcgtatccc
gcgtggggcagcgcggcggcgctggcgctgagcgcgctctgcctgctgctgtccctgggc
tcggtggccgcctgcctgctgctgagcgcccgggctaccgagctgcagggcagggtgtcc
gcgctcgaagaggagcaacagcagcggcagcggcgcacgggctggggttcccccgagacg
cctggagacctcatctcctgggcagagtcccacctggagcgtctcctgaaggagaagttg
gaaggagaagccaagctgcggaaagttcgagaagttttacctgagtgtctctgcccccca
ggacccccagggaggcgaggaaaacctggaagaagaggagatactggccctgcagggcaa
gcaggacgagacggttatccgggaccactgggtttggatggcaagccgggattgccgggg
cccaaaggtgaaaagggagaaccaggacacttcggcccccggggagatcgaggtcaagat
ggagccactggtccacctgggcccccaggtcctcctggagccagaggaccccctggagat
acaggaaaagatggtcctcggggacttcaaggcatggacggtctaaaaggagagcctgga
ccagaaggagggatgggcccaaaaggacctccaggactcaagggtgaacctggcatgccg
ggaagaaagggggatgacggattgccaggacaacaaggactacagggatccattgggcca
aagggagaagaagggagccctgggcctcaaggaaagaatggaactgatggaccaccagga
gccaagggagagcctggtgagagaggatctgatggcttccttggacccaggggtccacct
ggagtgaagggtgagcaaggagacacagtagtgattgactatgatggccgaatcctggat
gctctgaagggtcctccgggtcctcccggcccacctggtcctgcaggaagccctggagca
aagggagaacttggattgcctgggcctcctggagtcgatggagaaaagggtccaaagggc
tctaaaggagaccagggacagccaggactgatgggaccaaaaggagaaattggtgaaatg
ggcttgtctggccccccgggagtcgatggccccaaaggcgagaagggagaatcggggtct
gcaagtcttcaggagagcctggcccagattctagcggaaccggggccgcctggcttacct
ggccccccaggccctatgggtcttcagggaatccagggccccaagggcttggacggcgca
aagggggagaaaggtgccaccggagagaaaggctccaatgggctgctcggaccagctggc
ccacctggcctaattggattacccggaacaaaaggagagaagggcagacctggtgagcca
ggtttggatggcttccccgggccccgaggagagaagggagagaggagcaagcaaggagaa
aagggggaccgaggagttccgggcagaaaaggagcaaaggggcagaagggagagcctggg
ccgcctggattggatcagccgtgtccagtgggggcggatggcctacctgtggcaggctgc
tggcacaagtga
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