Monodelphis domestica (gray short-tailed opossum): 100032030
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Entry
100032030 CDS
T01031
Symbol
TAF1B
Name
(RefSeq) TATA-box binding protein associated factor, RNA polymerase I subunit B
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdo03021
]
100032030 (TAF1B)
Transcription machinery [BR:
mdo03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
100032030 (TAF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-GeneID:
100032030
NCBI-ProteinID:
XP_001381143
Ensembl:
ENSMODG00000014747
UniProt:
F6YN56
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All DBs
Position
1:complement(529595499..529748528)
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AA seq
592 aa
AA seq
DB search
MDFDEGNDYNERCTQCAAVSWKITDEGTYYCTSCLNVTERRKEVESVADFTPNTKIQAIN
RGLKKKRKLEKGWEWYVCEGFQYILHQQAEALLSLGVCPKLKDEVLHNFWKRYLQKSKQA
YCRKPIYSNNNKSAVSDSQMSLSGLDSEPELLSIYSCHLSESEVESRSDISSKLIFPNIK
TTQSETTSVCSGSIDGVEYLKQKEKGILKMTLPMTLAFCYMSLLWQRETITLSDLLRFVE
DGHIPYINTYQNFPEEMKVYGRDIRIFSIESWPVYEDIYEKIIELGKFLDLPRFPDITEN
CFLHPNMLCMKYLMEANLPDEMHNLTCQVVKLTGIGEVDFLTFDPITEKTRMVKYDVQAV
AVIVVVLKLLFLLNDNVEWSLSSLAQENNENNHEGKPCFDFRKWYQIMKKIIDEKQQQRE
EFKAKYLWKSEKPLYYSSADRSVVYKRRRMVMNLQKQFSTLVDSAPNSEKKNPTSFQLKW
TKEEQNTTCFHGHSLQEILQKKGKSLTTLNSQYWLSTQKFCKSYCKHVTTYEESNFSMSY
QFVLNLFSFLLRIKASLLHEEVSLIEKRLFYKKYETKSKASKSKKSKKILKR
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggattttgacgaagggaatgactataatgaacgctgtacacagtgcgctgcggtttct
tggaaaattactgatgaaggaacatattattgtacatcttgtctcaatgttacagagagg
cgtaaggaagttgaaagcgttgcggactttacacctaacacaaagatccaagccatcaat
agaggacttaaaaaaaagaggaaacttgagaaaggctgggagtggtatgtctgtgaaggt
tttcagtatatacttcatcaacaagctgaggccctgctatctctgggagtgtgccccaaa
ttaaaggatgaagtattgcataatttttggaagcgttatcttcagaaaagcaagcaggcc
tattgcaggaagccaatttattccaataataataaatctgcagtatctgacagccaaatg
agtctttcaggcttggatagtgagcctgagctgcttagtatctacagttgccatttatca
gagagtgaagtagaatctcggtctgatatcagtagtaaactgattttccccaacatcaaa
actacacagtctgaaacaacttctgtctgttctggatcaattgatggagttgaatactta
aaacagaaggaaaaagggattttaaagatgacactgccaatgacccttgcattctgctat
atgtcattactttggcaaagggaaacaattactctttcagatctcttgagatttgtagaa
gatggtcatattccctacataaacacttaccagaattttccagaggagatgaaggtatat
ggaagagacataagaatattttctatagagtcttggcccgtctatgaagatatatatgaa
aaaattattgaacttggaaaatttttggacttgcctcgttttccagatataactgagaac
tgttttctccatccaaatatgttatgtatgaagtacctgatggaagccaatttacctgat
gaaatgcataacctgacttgtcaagtggtcaaattgactggcataggagaagtagatttc
ctgacatttgatccaataacggaaaaaacaaggatggttaaatatgatgttcaggctgta
gctgtcattgttgtggtgctgaaactactctttttattgaatgacaatgtagaatggtcc
ctttctagccttgctcaagaaaataacgaaaacaaccatgaaggtaagccatgttttgac
ttcagaaagtggtatcagattatgaagaaaataatcgatgaaaaacagcaacaaagagag
gaattcaaagcaaagtacctgtggaaaagtgaaaagccattatattattcatcagcggac
agatcagtagtttataaaagaaggcgcatggtaatgaacctccaaaaacagtttagtaca
ttggttgattcagcaccaaattctgaaaagaaaaacccaacaagtttccagttaaagtgg
acaaaagaagagcagaatacaacttgcttccatggacacagtcttcaagaaatcctacaa
aagaaaggcaaatcattaacaaccttaaattcacagtattggcttagcactcagaagttc
tgtaagagttactgtaaacatgtgactacctatgaagaatccaatttttcaatgagctat
cagtttgtactaaatcttttctccttcttactgaggataaaggcttcacttcttcatgaa
gaagtaagcttaattgaaaagagacttttttacaaaaaatatgagactaaaagtaaagct
tccaaatcaaaaaaaagcaaaaagatcttaaaaagatag
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