Monodelphis domestica (gray short-tailed opossum): 100032082
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Entry
100032082 CDS
T01031
Symbol
TRIM71
Name
(RefSeq) tripartite motif containing 71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
100032082 (TRIM71)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdo03019
]
100032082 (TRIM71)
04121 Ubiquitin system [BR:
mdo04121
]
100032082 (TRIM71)
Enzymes [BR:
mdo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100032082 (TRIM71)
Messenger RNA biogenesis [BR:
mdo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100032082 (TRIM71)
Ubiquitin system [BR:
mdo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100032082 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
zf-B_box
DUF5128
SGL
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
100032082
NCBI-ProteinID:
XP_016281000
LinkDB
All DBs
Position
8:complement(292645313..292703811)
Genome browser
AA seq
1081 aa
AA seq
DB search
MNNSGWPRDAHAAAELVAPRPPFQSQGRRELRRVGPHPRLEQKRGVPEQLHSMPRAPNRA
EIIRLGASASASAAASSSRLGCKWLRFPNRISSSVPSVRRTSPRRRRPSRPPDRPGAGAE
AGAGAVQPPRPPPPPAAAAAAPAPPRPRRGSTSCPVSTPSAASVWRRRDTRLRRRRRQQQ
RAAAAEAAAAAAGGPLGEPLHSRCPIRDQKVVLSASPGMDALPSSNFLLSNLLDVVVAAE
DSPPPPPPPPKNNGRGVVGGGGGGGGSGSNNRHHHHHHHHHHHPRAPPPQPQPPPTAGSP
LQPPQPPPSSSSTSSSSSSQQQQQQPQAQPSSSSSQQQQQQQQQQQQPPPPAQHPHREHP
HAPRAPSAQSSSSSSSSSSSLMLRRPHSQGEARCSSCDEGNTASSRCLDCQEHLCDNCVR
AHQRVRLTKDHYIERFGSPAAAAAAAAAAAAVAAAAANNTAAAAAQLALSQSFPGSPFSI
LSVFPERVSYCQQHDDEVLHFYCDTCSVPICRECTMGRHVGHSFIYLQDALQDSRTLTIQ
LLADAQQGRQAIQLSIEQAQAVAEQVEMKAKVVQSEVKAVTSRHKKALEERECELLWKVE
KIRQVKAKSLYLQVEKLRQNLNKLDSTISAVQQVLEEGRAMDILLARDRMLAQVQELKTV
RSLLKPQEDDRVMFTPPDQALYLAIKSLGFVSSGAFAPLTKATGEGLKRALQGKVASFTV
IGYDHDGEPRLSGGDLMSAVVMGPDGNLFGADVSDQQNGTYLVSYRPQLEGEHLVSVMMC
NQHIENSPFKVLVKSGRSYVGIGLPGLAFGSEGDNDGKLCRPWGVSVDKEGYIIVADRSN
NRIQVFKPCGTFYHKFGTLGSRPGQFDRPAGVACDSSRRIVVADKDNHRIQIFTFDGQFL
LKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRVQLFGPDGAFLNKYGFEGALWKHF
DSPRGVTFNHEGHLVVTDFNNHRLLVIHPDCQSARFLGSEGTSNGQFLRPQGVAVDQEGR
IIVADSRNHRVQIFESNGSFICKFGAQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILI
F
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgaataattcagggtggccccgcgatgcacatgcagccgctgagctcgtagccccgagg
cctccgttccaaagccaggggcggagggagctgaggagggtgggcccacaccccaggctg
gaacagaagcgcggggtgcctgagcagctgcactcaatgccgcgtgctccgaaccgggca
gagataattcgtctcggcgccagcgccagcgcctccgccgccgcctcctcctcccgtttg
ggttgcaaatggcttcgcttcccgaaccggatctccagctcagtccccagcgttaggcgc
actagtccacgtcgccgccgtcccagcagacctccagatcggccgggggcgggggcggag
gcgggggcgggggcggtccagcctccgcgtcctcctcctcctcccgctgctgctgctgct
gctcctgctcctcctcgtcctcgccgaggcagcacatcctgccctgtctccacgccttct
gccgccagtgtctggaggcgcagagacactcggctgcggcggcggcggcggcagcagcag
cgggcagcggcggcggaggcggcggcggcggcggcaggcgggccgctcggggagcccctg
cactcgcgctgccccatccgcgaccagaaagtggtgctctctgcctcgccgggcatggat
gcgctgccctcctccaacttcctcctgagcaacctgctggacgtggtggtggcggccgag
gattcgccgccgccgccgccgccgccgcccaagaacaacggccgcggggtggtgggcggc
ggcggcgggggcgggggcagcggcagcaacaaccgccatcaccaccatcaccatcaccac
caccaccacccccgtgcgcccccgccgcagccgcagccgccgcccacggccggctccccg
ctgcagccgccgcagccgccgccctcctcctcctctacctcctcctcttcttcctcccag
cagcagcagcagcagccgcaggcgcagccgtcttcctcctcctcccagcagcagcagcag
cagcagcagcagcagcagcagccgccgccgcctgcgcagcacccgcaccgggagcacccg
cacgcgccgcgcgccccgtcagcccagtcctcgtcgtcgtcctcgtcttcttcctcgtcg
ctgatgctccggcggccgcacagccagggcgaggcgcgctgcagctcttgcgacgagggc
aacacggccagctcgcgctgcctcgactgccaggagcacctgtgcgacaactgcgtccgc
gcgcaccagcgggtgcgcctcaccaaggaccactacatcgagcgcttcggcagcccagcc
gcggcggccgcagcagcagccgccgccgccgccgtggccgccgccgccgccaacaacacg
gcggcggccgcggcgcagctcgcgctcagccagtccttccccggctcgcccttctccatc
ctctcggtgttccccgagcgggtcagttactgccaacagcatgatgacgaggtgctccat
ttctactgtgacacgtgctccgtccccatctgccgagagtgcacgatggggcgccacgtc
gggcacagctttatctacctccaggatgccctccaggactctcgaaccctgaccatccag
ctgctggccgacgcacagcagggccgccaggccatccagctaagcatcgaacaggcccag
gcggtggcggagcaagtggagatgaaggcgaaggtggtccagtccgaagtgaaggcggtt
acgtcccggcacaagaaggccctggaggagcgggagtgtgagctgctgtggaaggtggag
aagatccggcaggtcaaggccaagtctctgtacctgcaagtggaaaagcttcggcagaac
ctcaacaagctggacagcaccatcagcgcggtgcagcaggtcctggaggaggggcgcgcc
atggacatcctgctggcccgagaccgcatgctggcccaggtgcaggagctcaagaccgtg
cggagcctcctgaagccccaggaagacgacagagtcatgttcacaccgcccgaccaggcg
ctgtacctggccatcaagtctctgggcttcgtcagtagcggggcttttgcgcccctgacg
aaggccaccggggaaggcctgaaacgcgccctccaaggcaaggtggcctcgttcaccgtc
atcggctacgaccacgacggggagccgcggctgtccgggggagacctgatgtccgctgtg
gtgatggggcccgacgggaacctgttcggcgccgacgttagcgaccagcagaacgggacc
tacctggtcagctaccggccgcagctggaaggcgagcacctggtctctgtcatgatgtgc
aaccagcacatcgaaaacagccctttcaaggtgctggtcaagtccggccggagctacgtg
gggatcggcctgcccggcctcgccttcggcagcgagggcgacaacgacggaaagctgtgc
cgcccgtggggggtcagcgtggacaaggagggctacatcatcgtggctgaccgcagcaac
aaccgcatccaggtgtttaagccctgcggcaccttctatcacaagttcggcacgttgggc
tcgcggcccggccagttcgaccgcccggcgggggtggcgtgcgactcctcccggaggatc
gtggtggccgacaaggacaatcatcgcatccagatcttcacgtttgacgggcagttcctg
ctcaagtttggtgagaaaggcacgaagaacggacagttcaactacccttgggacgtggca
gtgaattcggaaggcaagattctggtctctgatacccggaaccaccgagtccagctgttc
gggcccgatggagccttcctgaacaagtacggctttgaaggggccctctggaagcacttt
gattccccccggggcgtgaccttcaatcacgaaggccatctggtggtgacggacttcaac
aaccaccgcctgctggtcatccacccagactgccagtctgcacgcttcctggggtcagag
ggcacaagcaatgggcagttcctgcgccctcagggggtcgcggtggaccaggaaggacgc
atcatcgtggccgattccaggaatcatcgggtgcagatatttgaatccaatggcagtttc
atatgcaaatttggtgctcagggaagtggctttggccaaatggaccgtccctctggcatt
gctgtcactccagatggcatgattgtcgtggtcgattttggaaacaatcggatcctcatc
ttttaa
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integrated database retrieval system
