Monodelphis domestica (gray short-tailed opossum): 100032808
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Entry
100032808 CDS
T01031
Symbol
TIA1
Name
(RefSeq) TIA1 cytotoxic granule associated RNA binding protein
KO
K13201
nucleolysin TIA-1/TIAR
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdo03019
]
100032808 (TIA1)
03041 Spliceosome [BR:
mdo03041
]
100032808 (TIA1)
Messenger RNA biogenesis [BR:
mdo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
100032808 (TIA1)
Spliceosome [BR:
mdo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100032808 (TIA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
RRM_10
RRM_ACIN1
RRM_3
DUF8400
Calcipressin
Motif
Other DBs
NCBI-GeneID:
100032808
NCBI-ProteinID:
XP_007476353
Ensembl:
ENSMODG00000011515
LinkDB
All DBs
Position
1:563757210..563794519
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AA seq
397 aa
AA seq
DB search
MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFYEHRH
AAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTLRSQDHFHVFVGDLSPEIT
TEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIR
TNWATRKPPAPKSTYESNTKQLSYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFG
QIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMLNPVQQQN
QIGYPQAYGQWGQWYGNAQQIGQYMPNGWQVPAYGMYGQAWNQQGFNQTPPPPPPPPPPQ
TSAPWMGANYGVQPPQGQNGSMLPNQTGYRVAGYETQ
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgagatgcccaagaccctgtatgtaggcaacctttctcgagatgtgacagaa
gccctaattctccagctgttcagccagattggaccatgcaaaaactgcaagatgattatg
gatgtaaggacagctggaaatgatccttactgttttgtggagttttatgagcaccgtcat
gcagctgcagcactagctgcaatgaatggacggaagataatgggtaaggaggtcaaagtg
aattgggcaacaacccctagcagtcagaagaaagatacaagcagtagtaccgttgtcagc
acactgcgttcacaagatcatttccatgtctttgttggtgatctcagtccagaaattaca
actgaagatataaaagcagcttttgcaccatttggaagaatatcagatgctcgagttgta
aaagacatggcaacagggaagtcaaaaggatatggctttgtttccttcttcaacaaatgg
gatgcagaaaatgccatacagcagatgggtggacagtggcttggaggaagacaaatcaga
actaactgggcaacacgaaaacctccagctccaaagagtacatatgaatctaatactaaa
cagctatcttatgatgatgtggtaaatcagtccagtccaagcaattgcactgtgtactgt
ggaggtgttacttcaggcctaacagaacaactaatgcgccagactttttcaccatttgga
cagataatggaaattcgagtctttccagacaagggatactcatttgtacggttcaattcc
catgagagtgctgcacatgcaattgtttcagttaatggtactacaattgaaggacatgtt
gtgaaatgctattggggcaaagaaactcttgatatgctaaatccagttcaacagcagaat
caaattggatatccacaggcttatggccagtggggccagtggtatggaaatgcccaacaa
attggccagtatatgcctaatggttggcaagtacctgcatatggaatgtatggacaggca
tggaatcaacagggatttaatcagacacctcctcctccaccaccaccaccaccaccacag
acttctgcaccatggatgggtgcaaattatggagtacagccaccgcaagggcagaatgga
agcatgttgcccaatcaaactggatatcgcgtggcaggttatgagactcaatga
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