Monodelphis domestica (gray short-tailed opossum): 100033052
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Entry
100033052 CDS
T01031
Symbol
SORT1
Name
(RefSeq) sortilin 1
KO
K12388
sortilin
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04142
Lysosome
mdo04722
Neurotrophin signaling pathway
mdo04979
Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
100033052 (SORT1)
09150 Organismal Systems
09154 Digestive system
04979 Cholesterol metabolism
100033052 (SORT1)
09156 Nervous system
04722 Neurotrophin signaling pathway
100033052 (SORT1)
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
BNR
Mo-co_dimer
Motif
Other DBs
NCBI-GeneID:
100033052
NCBI-ProteinID:
XP_003340513
Ensembl:
ENSMODG00000002062
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All DBs
Position
2:complement(478394549..478464319)
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AA seq
834 aa
AA seq
DB search
MEPPRGAAAAAVCSPSLWLRGLGLLLLLPAVPASLGRDLLDAPPPAAAGIRTALLADRPG
PSLRSRLWGTEVGLGQRRRRSPNGEDEGCSPLQGFEASLVNNTHQHVFDDLSGSVSLSWV
GDSTGVILVLTTFHVPLVIMTFGQSKLYRSEDYGKNFKDITNLINNTFIRTEFGMAIGPE
NSGKVILTGDVSGGSHGGRIFRSSDFAKNFIQTDLPFHPLTQMTYNPQNSDYLLVVSSEN
GLWVSRNFGGKWEEIHKAVCLAKWGSQNTIFFTTYVNGSCKADLGVLELRRTSDFGKSIK
TIGVKIYSFGLGGRFLFASVMADKGATRRIHVSVDEGETWSMAQLPSVGQEQFYSILAAN
DDMVFMHVDEPGDTGFGTIYTSDDRGIVYSKSLERHLYTTTGGDTDFTNVTSLRGVYMTS
VLSEDSSIQSMITFDQGGRWKLLRKPENSKCDSTAKNKEECSLHIHASYSISQKLNVPMA
PLSEPNAVGIVIAHGSVGDAISVMSPDVYITDDGGYSWTKMLEGPHYYTILDSGGLIVAI
EHSGRPINVIKFSTDEGQCWNIYTFSKEPIYFTGLASEPGAKSMNISIWGFTESFLSRKW
VSYTIDFKDILVRNCEEKDYTIWLAHSTDPGDHDDGCILGYKEEYLRLRKSSVCHNGRDY
VVTKQPSVCTCTLEDFLCDFGYFRPENDSKCVEQPELKGHDLEFCLYGKEEHLTTKGYRK
IPGDKCQGGMSPDREEKDXKKKCTSSYLSPDKQKSSSNSTPIILAIVGLMLITIIAGVLI
VKKYVCGGRFLVHRYSILQQHAEANGVDGVDTLDSASHHNKNSYHDDSDEDLLE
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggagcctccccggggagctgctgcagccgccgtctgtagtccctcgctctggctccgt
ggcctcggcctcctcctcctgctgcccgcagttcccgccagcctcggccgggacctactg
gacgctccgccgccagcggcggccggaattcggactgcactgctggctgaccggccgggc
ccctcgctgaggagccggctgtggggaacagaagtcggcctcggccagcgacggcggcgg
agcccgaacggagaggacgagggctgcagcccgcttcagggtttcgaggccagtctggtt
aacaacacgcaccagcacgtgtttgatgatcttagtggctcagtatctctctcatgggtt
ggagacagcactggggtcattctagtcttgactacattccatgtaccactggtaatcatg
acttttgggcagtctaagctttatcgaagtgaggattatggaaagaactttaaggatatc
acgaatctcatcaataacactttcattcggacagaatttggaatggctattggacctgaa
aactctgggaaggtgattttgacaggggacgtgtctggaggaagtcatggaggaagaatt
tttaggtcatctgattttgcaaagaattttattcagacagatctgccttttcaccctctg
actcagatgacctataacccccagaattctgattaccttttggttgtcagctcagaaaat
ggcctgtgggtgtcgaggaactttgggggaaaatgggaagaaatccacaaagcagtatgt
ttggccaagtggggatcacaaaacaccatcttcttcactacctatgtgaatggctcctgc
aaagctgaccttggagtattggaattaagaagaacctctgactttggcaaaagcatcaag
accattggagtaaaaatctattcttttggcttgggaggacgattcctctttgcttcagtg
atggctgataaaggtgctacaagaaggattcatgtgtctgtagatgaaggagagacctgg
agtatggcccagctcccttctgtgggacaagaacagttctattctattttagcagctaat
gatgatatggtgttcatgcatgttgatgaacctggggatactggatttggcacaatctat
acctcagatgatcgaggtattgtttattcaaaatcactggagcgacatctttatactaca
acaggaggggacacagacttcactaatgtgacttctcttcgaggggtttacatgaccagt
gtcctctctgaagatagttctatccaatccatgattacttttgaccaaggaggaaggtgg
aagctcctgaggaaacctgaaaacagcaagtgtgactcaacagctaaaaataaagaggag
tgcagccttcacatccatgcctcctacagtatttcccagaagctgaatgttccaatggcg
cccctctcagaacctaatgctgttggcatagtcatcgctcatggtagcgtgggagacgcc
atctcagtgatgagtccagacgtttacattaccgatgatgggggctactcctggacaaag
atgctagaaggacctcactattacaccatcctggattcggggggccttatcgtggccatt
gagcacagcggccgtcctatcaatgtgattaagttttccacggatgaaggacagtgctgg
aacatatacacattttccaaggaacccatttattttactggcctggcatcagagccagga
gctaaatccatgaatatcagcatttggggtttcacagaatctttcttatcccggaaatgg
gtctcctacaccatcgattttaaagacatccttgtcaggaactgtgaagagaaggactat
accatatggttggctcactccacggaccctggagaccatgatgatggttgtatactgggc
tacaaagaagagtaccttcgccttcgaaagtcttcagtctgtcataatggtcgagactat
gtggtgaccaagcagccgtccgtctgcacctgtaccctagaggatttcctctgtgatttt
ggctacttccgtccagaaaatgattccaagtgtgtggaacaacccgagctgaagggccat
gacctagagttctgtctgtatgggaaagaagaacatttgacaacaaaagggtaccggaaa
attcctggagacaaatgccaaggggggatgagtccagaccgagaggaaaaggacntgaaa
aaaaagtgtacaagcagttatttgagtccagataagcagaagtcttcatcaaattccact
ccaattatcctggccattgtgggactgatgctgatcacaatcatagctggagttctcatt
gtaaagaaatatgtctgtggaggcaggtttttggtgcatagatattcaattctacagcag
cacgcagaggcgaatggtgttgatggagtagacactttggactcagcctcccatcacaat
aaaaatagttaccacgatgactcggatgaggaccttctagaatag
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