Monodelphis domestica (gray short-tailed opossum): 100033356
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Entry
100033356 CDS
T01031
Symbol
MSH6
Name
(RefSeq) mutS homolog 6
KO
K08737
DNA mismatch repair protein MSH6
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo01524
Platinum drug resistance
mdo03430
Mismatch repair
mdo05200
Pathways in cancer
mdo05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
100033356 (MSH6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100033356 (MSH6)
09162 Cancer: specific types
05210 Colorectal cancer
100033356 (MSH6)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
100033356 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdo03400
]
100033356 (MSH6)
DNA repair and recombination proteins [BR:
mdo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
100033356 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
100033356
NCBI-ProteinID:
XP_001382177
Ensembl:
ENSMODG00000001129
LinkDB
All DBs
Position
1:complement(649547104..649581685)
Genome browser
AA seq
1423 aa
AA seq
DB search
MSRQSTLFSFFPKSPALCSNNKAAAIAADGSGTRAGAGTAGAGGSGASSARGDAAQSEET
HPGSDSAALPGPGPDSAALPGPGPEPAAVPGPGPEPAAVPGPGPDPAAVPGPGPGQCPRR
SSSGVALLPQEIKVNGGPRRRAVGVATPARAPVATPASSCDFSPGDLVWAKMEGYPWWPC
LVYNHPTEGTFIRERGKTFRVHVQFFDDNPVRGWVNKRLVKPYTGSKCKEAQKGGPFYTA
KPEILRAMQLADDAISIEKSKRLELAVCDEPSDPDEEEMEVAVASASENSGEDIESEEEV
RPKRHLAKRSTARNKKRRVVSDSESDIGGSDVEFKPDTKEEGSSDEASSGMGESDSDTDS
PVKAPKRRRGNSTLKKKSLGGYTPNVSKRVVGVSSETKITLNAFSAPQNFESQAHVSGGG
DGSHGSTQWYHETLEWLKEGKRKDACRRRPDHSDYDPNTVHVPEDFLNTCTPGMRRWWQI
KSQNFDLVIFYKVGKFYELYHMDAVIGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQK
GYKVARVEQTETPEMMEARCRKLSHISRFDRVVRREICRIITKGTQTYSVLDGEPSESSN
KYLLCVKEKEEEASGHTRLYGVCFIDTSVGKFYMGQFSDDRHCSRFRTLVAHYTPAQILF
EKGNLSVETRKVLKGSLSSSIQEGLTPGSQFWDAAKTLKTLLEEGYFKEKLNVAELPPVL
KSMTSESDTIGLTPNDKSELALSALGGCVFYLKKCLIDYELLSMANFEEYIPIDADMVKA
VKPGAVFAKRDRRMVLDAVTLSNLEILQNAVNGSTEGTLLERIDSCCTPFGKRLLKHWLC
APLCNPSSINDRLDAMEDLMAVPDKTSEVVDLLKKLPDLERLLNKIHSVGSPLKSQKHPD
SRAIMYEETTYSKKKIVDFLSALEGFKVMCKIIGIMEEVVDNFKSKILKQIITLQTQNSG
GRFPELTTELNRWDTAFDHEKARKTGIITPKAGFDSDYDHALADIKDNEQSLLEYLEKQR
KRIGCRSIVYWGVGKNRYQLEIPESFTLHDLPEEYELKSTKKGCKRYWTKDIEKKLADLM
NAEERRDISLKDCMRRIFFNFDKNYTDWQTAVECIAVFDVLLCLSNYSRGDARMCRPVIL
VPDEDTQPFLKLKGARHPCITNNFFGDDFIPNDIMIGCKEEDSEDGNWDAYCVLVTGPNM
GGKSTLMRQAGLLVIMAQMGCYVPAEVCNFTPVDRVFTRLGASDRIMSGESTFFVEMNET
ASILQHATEHSLVLMDELGRGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYS
QNVAVCLGHMACMVENECEDPSQETITFLYKFINGACPKSYGFNAARLARLPEEIIQKGH
RKAREFEKTTQSLRLFREVCLALENSGADVQAIHKLLTLIKEL
NT seq
4272 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacagagtaccctgttcagcttcttccctaagagcccggcgctgtgcagcaac
aacaaggctgccgccattgctgcggatggaagcggcactagggccggagcggggaccgcg
ggtgctggaggctctggggcctcctctgcacgcggggatgcggcccagagtgaagaaacc
catccaggctctgactctgctgcgctcccaggccccggccctgactctgctgcgctccca
ggccccggccctgagcctgctgctgttccaggccccggccctgagcctgctgctgtccca
ggcccgggccctgaccctgctgctgtcccagggcccggccctggtcaatgtccccgccgc
tccagctccggggtcgccctactgccccaagagataaaagtcaacggagggccgcgccgg
cgggcggtgggagtggcgactccagcccgggccccggttgctactccagccagctcttgt
gacttctctcctggtgatttggtttgggccaagatggaaggttatccctggtggccttgc
cttgtgtataaccaccccactgaaggaacattcatcagagaaagggggaaaactttccga
gtccatgtacagttttttgatgacaatccagtgaggggctgggttaataaaaggcttgta
aagccatatacaggttcaaaatgtaaggaagcccagaaaggaggccctttttatactgca
aagcctgaaatactcagggcaatgcaattggcagatgatgctataagtatagagaagagt
aagcggcttgaattagcagtatgtgatgagccttcagatccagatgaggaagagatggag
gtggctgtagcttctgcatcagagaacagtggagaggatatagaaagtgaagaggaagtg
agacccaagaggcatctggctaaacgtagcacggctcggaacaaaaaacggagagttgtt
tcagactctgagagtgacattggtggttcagatgtggaatttaaaccagataccaaggag
gaagggagcagtgatgaagcaagtagtgggatgggtgaaagtgatagtgatacggacagc
cctgtcaaagctcccaaacggaggaggggcaacagcactctcaagaagaaaagcttggga
ggttacactcctaatgtatctaaacgagtagtaggagtttcctcagagactaagatcaca
ttgaatgctttctctgctccacaaaactttgagtcccaagcccatgtcagtggaggtggt
gatgggagccatggctctactcagtggtaccatgaaacactggagtggctaaaggaggga
aagaggaaagatgcatgcaggaggcggcctgatcattctgactatgacccaaacactgtc
catgtccctgaggatttccttaacacttgcactccaggaatgagaaggtggtggcaaatc
aagtctcagaactttgacctagtcatcttctacaaagtggggaagttctatgagctctac
cacatggatgcagtcattggggtcaatgagctagggctagtgtttatgaaaggcaattgg
gcccattcaggtttcccagaaattgcatttggtagatattcagattccttagttcagaag
ggttacaaagttgctcgagtcgagcaaacagaaacccctgagatgatggaagctcgttgc
cgaaagctgtctcacatatccagatttgacagggtggtgcggagagagatctgcagaatt
attaccaaggggacccagacttacagtgtgctggatggtgaaccttctgaaagcagcaat
aagtatctgctatgtgtcaaagaaaaagaggaggaagcttctggtcacactcgtttgtat
ggtgtttgctttattgacacctctgtgggcaagttttacatgggtcagttttcagatgac
cgtcattgctcccgatttaggactctggtggcacattacactcctgcacaaatactgttt
gagaaaggaaatctctctgttgaaacaaggaaggtcttaaaggggtctttatcttcttcc
attcaggaaggtctgacacccggctcccaattttgggatgcagccaaaaccttgaaaaca
ctccttgaagaaggatactttaaagaaaagctaaatgtggctgaattaccccctgtgctt
aagagcatgacatcagagtctgacaccattggtttaacacctaatgacaagagtgaattg
gcattgtctgctttgggtggttgtgtcttctacctcaaaaaatgccttatagattatgag
cttttgtctatggccaactttgaagaatacattcctattgatgctgatatggtgaaagct
gtgaagcctggtgctgtctttgctaagagagatcgtcgaatggtgctagatgctgtcacc
ctgagcaacctggagattctccagaatgcagtaaatggctccactgaaggtacactgttg
gagaggattgattcttgttgtactccctttgggaagcggcttctaaaacactggctctgc
gcaccactttgtaacccatcctcaatcaatgatcgtttagatgcaatggaagatctcatg
gctgtgcctgacaaaactagtgaagtagttgaccttctgaagaaacttccagaccttgag
aggctgttgaacaagattcatagtgttggctcgccactaaagagtcagaagcacccagat
agcagagctataatgtatgaagaaacaacttacagcaaaaaaaagattgtggatttcttg
tctgctctagaaggattcaaagtgatgtgcaaaattattgggattatggaagaagtggtg
gataatttcaagtctaaaatccttaagcaaataattacacttcagacccaaaattcagga
ggtcgtttccctgaattgaccacagaattgaaccgatgggatacagcttttgaccatgaa
aaagctcgaaagactggtataattactcccaaagcgggatttgattctgattatgaccac
gccttggctgacatcaaagacaatgaacagtctctcttagagtatttggagaaacagcgt
aaacggattggctgtagatccatagtttactggggtgttggcaaaaatcggtatcagttg
gaaattccagaaagttttacattacatgatttgccagaggaatatgaactaaagtccacc
aagaagggttgtaaacgatactggaccaaggacattgagaagaaacttgctgatctgatg
aatgctgaagagcgaagagatatatcactgaaggactgtatgaggaggatcttcttcaat
tttgataaaaattatacagactggcagactgctgtggagtgcattgcggtatttgatgtc
ttattgtgcttgtccaactatagtcgaggtgatgctcgtatgtgtcgtccagtaatcctg
gtaccagatgaagatactcagcccttcttaaagcttaaaggagctcgacatccatgcatt
acaaataatttttttggtgatgactttattcctaatgacattatgataggctgtaaagaa
gaagattcagaagatggtaactgggatgcttattgtgtgctggttaccggaccaaatatg
ggaggcaaatccactctcatgagacaggctggtcttttggttataatggctcagatgggc
tgttatgttcctgctgaagtttgtaatttcacaccagttgatagagtgttcaccagatta
ggtgcttcagacagaataatgtcaggtgaaagtaccttttttgttgaaatgaatgagact
gccagcatactacagcatgcgacagaacattccctggtgctcatggatgaactaggtaga
ggcactgcaacttttgatggcacagctatagcaaatgcagttgttaaagaacttgccgag
accataaagtgtcgtactttattttctacacactatcattcattagtagaggattactcc
caaaatgttgctgtgtgcctgggacacatggcatgcatggttgaaaatgaatgtgaagac
ccaagtcaggaaaccattaccttcctttataaatttattaatggtgcttgtcctaaaagc
tatggattcaatgcggcgaggcttgctcgtcttcctgaagagattattcaaaaaggtcat
aggaaagcaagagaatttgagaagacaacccagtcattgagattatttcgggaagtttgc
cttgctcttgaaaattcaggtgcagatgtccaggctattcacaagttgttgactttgatc
aaggaactttga
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integrated database retrieval system
