Monodelphis domestica (gray short-tailed opossum): 100033358
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Entry
100033358 CDS
T01031
Symbol
MSH2
Name
(RefSeq) mutS homolog 2
KO
K08735
DNA mismatch repair protein MSH2
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo01524
Platinum drug resistance
mdo03430
Mismatch repair
mdo05200
Pathways in cancer
mdo05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
100033358 (MSH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100033358 (MSH2)
09162 Cancer: specific types
05210 Colorectal cancer
100033358 (MSH2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
100033358 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdo03400
]
100033358 (MSH2)
DNA repair and recombination proteins [BR:
mdo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
100033358 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
100033358
NCBI-ProteinID:
XP_001382178
Ensembl:
ENSMODG00000001098
UniProt:
F7DPM7
LinkDB
All DBs
Position
1:complement(650062392..650136796)
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AA seq
934 aa
AA seq
DB search
MAVQPKEVLAMDSQAECSFVRFFQALPAKPLTTVRLFDRGDYYTAHGEDALLAAREVFKT
QAVIKYIGLTGSKKLESVVLSKMNFESFSKDLLLVRQYRVEVYKNKAGNKATKENDWHVA
FKASPGNLSQFEEILFGNNDMSCSIGGVGVKLSIVDGQRLVGVGYVDSIQRKLGLCEFPD
NDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQVIERGGILITERKKVDFAAKDIVQD
LNRLLKSKKGDQVNSAVLPEMENQVAISSLSAVIKYLELLSDDSNFGQFELTTFDLSQYM
KLDNAAVRALNLFQGSAEDKSGTQSLAALLNKCKTPQGQRLLNQWIKQPLLDKNRIEERL
NLVEAFVVDAELRQSLQEDLLRRFPDLHRFAKKFQRHAANLQDCYRMYQAINQLPNVIQA
LEKHEGKHQMLLLAIFVTPLTDLHSDFSKFQEMIETTLDMNQVENHEFLVKASFDPHLTQ
LRESIDNLEKKMQSSLTSAARELGIEAGKHIKLDSNAQLGYYFRVTCKEEKVLRSNKNFN
TLDVQKNGVKFTNSKLAAFNDEYLKIRDEYEEAQDAIVKEIINISSGYVEPMQTLNDVLA
QLDAVVSFANVANGAPIPYVRPVILEKGQGRIILKGSRHACVEVQDEVAFIPNDINFEKN
KQTFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDCQMK
GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF
ATHFHELTALADQLPTVNNLHVSALTTDEALTMLYQVKKGVCDQSFGIHVAELANFPKHV
IENAKQKALELEEFQHFGKPQESDEMEPATKRCYHEREQGEKIIQTFLAKVKELPFAEMS
EDGIRTKLKQLKAEVISQNNSFVNEIISRIKVTP
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagccgaaagaggtgttggccatggacagccaggccgaatgcagctttgtc
cgcttcttccaggccttgccggcaaagccgcttaccactgtgcgcctcttcgaccggggc
gattactataccgcgcacggcgaggatgcgctgctggccgctcgggaggtgtttaagacc
caggcagtcatcaaatatatcgggttgacaggttctaaaaaactggaaagtgttgtgctt
agtaaaatgaattttgaatctttttcaaaagacctcctcttggttcgtcagtatagagtt
gaagtttataagaataaagctgggaataaggccaccaaggagaatgactggcatgtggca
ttcaaggcttcaccaggtaacctttcccaattcgaagaaattctctttggcaacaatgac
atgtcatgttccattggtggtgttggtgttaagctgtccattgttgatggccaaagatta
gttggagttgggtatgttgactccatacagaggaagctgggactgtgtgagtttccagat
aatgatcagttctccaatctggaagcactgctgattcaaattggcccaaaggaatgtgtc
ctaccaggaggtgaaactgctggggacatgggaaaactgagacaggttattgagagagga
ggaattctgatcacagagaggaagaaagttgattttgctgcaaaagatattgttcaggac
cttaaccgtttgttgaaaagcaaaaagggagatcaagtgaatagtgctgtattgccggag
atggagaatcaggttgcaatttcatcattatcggctgtgattaagtatttagaactttta
tcagatgattcaaactttggacaatttgaactgaccacctttgacctcagccagtatatg
aagttggataatgcagctgtcagagctcttaatctttttcagggctctgctgaagacaaa
agtggtactcagtctcttgctgcattgctgaataagtgcaaaacacctcaaggccaaaga
ctgcttaatcaatggattaaacagccactactggataagaacaggatagaggaaaggtta
aacctagttgaggcatttgtagtagatgcagagctgaggcagagtttgcaagaagactta
cttcgtcgtttcccagatcttcaccgatttgcaaaaaaatttcaaagacatgcagctaac
ctacaggattgttaccgaatgtatcaagccataaaccagctccctaatgttatacaagca
cttgaaaaacatgaaggaaaacaccagatgttgttattggcaatcttcgtaactcctctg
actgatcttcattctgatttctccaaatttcaggaaatgatagaaacaaccttagatatg
aatcaggtggaaaaccatgaatttcttgtgaaggcatcctttgatcctcacttgacacag
ctaagggaatcaattgataatctagaaaagaagatgcagtcatcgttaacaagtgcagca
agagagctaggcatagaagctggtaaacacattaaactggactctaatgcacaactagga
tattatttccgagtgacctgcaaggaagaaaaagtccttcgtagcaataaaaactttaac
acgttagatgtccagaagaatggtgttaagtttaccaacagtaaattggctgctttcaat
gatgagtacctcaaaattagagatgagtatgaggaagcccaggatgccattgttaaagaa
atcatcaacatttcttctggctatgtagaaccaatgcagacactgaatgatgtattagct
caactggatgctgttgtcagttttgctaatgtagcaaatggagcacctattccatatgta
cgtccagtcattttggaaaagggacaaggaagaatcattttgaaaggttccagacatgct
tgtgttgaagttcaagatgaagttgcatttattcccaatgacattaactttgagaaaaat
aagcagacgttccacattattactggccccaatatgggaggtaaatcaacatatatccgt
caaactggagtaatagttctgatggctcagattggctgttttgtaccatgcgagtcagca
gaagtgtccattgtggattgtatcttggctcgagtgggagcaggtgattgtcagatgaaa
ggtgtatctacattcatggcagaaatgctggagacggcttccattctcaggtctgcaacc
aaagattccctcataatcattgatgagttgggaagagggacttctacctatgatggattt
gggttagcctgggctatttcagaatacattgccactaagattggtgctttctgtatgttt
gcaactcattttcatgaactgaccgcattggctgaccaattgccaacagtgaataatcta
catgtttcagcattaactactgatgaggcattaactatgttatatcaagtaaagaaaggt
gtctgtgatcagagttttgggattcatgttgcagaactcgctaattttcctaagcatgta
atagaaaatgccaaacaaaaggccctggaattagaggaattccagcattttggaaaacct
caagaatctgatgaaatggaaccagcaaccaagaggtgctaccacgaaagagagcaaggt
gaaaaaataattcagacatttctggccaaagtaaaggaattgccctttgcagaaatgtct
gaggacggcatcagaaccaaattaaaacaactgaaagctgaagtaatatcacaaaataac
agttttgtgaatgaaataatttcacggataaaagttactccatga
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