Monodelphis domestica (gray short-tailed opossum): 100616788
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Entry
100616788 CDS
T01031
Symbol
CTCF
Name
(RefSeq) CCCTC-binding factor
KO
K23195
transcriptional repressor CTCF
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdo03000
]
100616788 (CTCF)
03036 Chromosome and associated proteins [BR:
mdo03036
]
100616788 (CTCF)
Transcription factors [BR:
mdo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
100616788 (CTCF)
Chromosome and associated proteins [BR:
mdo03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100616788 (CTCF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
zf-C2H2_ZN142
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
zf-C2H2_6
Zf-C2H2_ZNF451
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
100616788
NCBI-ProteinID:
XP_003339817
Ensembl:
ENSMODG00000005757
UniProt:
F6QDS6
LinkDB
All DBs
Position
1:685252838..685301800
Genome browser
AA seq
728 aa
AA seq
DB search
MEGEAVEAIMEESETFIKGKERKTYQRRREGGQDEDACHISQTQADGSEVVQEVNSSVQM
VMMEQLDPTLLQMKTEVMEGTVPQEADATVDDTQIITLQVVNMEEQPINLGELQLVQVPV
PVTVPVATTSVEELQGAYENEVAKEGLPEGEPMICHTLPLPEGFQVVKVGANGEVETLEQ
GELQPQEDPNWQKDPDYQPPAKKTKKTKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEV
NAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCG
RAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYAS
VEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSG
TMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERY
ALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDM
HFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCTGLDGIDGENGGETKKGKRGRKR
KMRSKKEESSDSEENAEPDLDDNEDEEETAVEIEAEPEVQPVTPAPPPAKKRRGRPPGKS
SQPKQTQPTAIIQVEDQNTGAIENIIVEVKKEPDAETVEGEEEEPQSAVVEAPNGDLTPE
MILSMMDR
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgaggcagttgaagcaatcatggaggagtctgaaaccttcatcaaaggaaaa
gagaggaaaacgtatcagaggcggcgggaagggggccaggatgaagatgcttgtcatata
tcacaaacccaagcagatgggagtgaagtagttcaggaggtaaacagcagcgtccagatg
gttatgatggagcagttagaccctaccctacttcaaatgaagactgaagtaatggagggt
acagtacctcaggaagctgacgctactgtagatgacacccagataataacacttcaagtt
gttaatatggaagaacaacctataaaccttggggagcttcaacttgttcaggtacctgtg
ccagtaacagtacctgtggccaccacttctgtggaagaacttcagggggcttatgaaaat
gaagtagctaaagaaggcctgcctgaaggcgaacccatgatttgccacaccttacctttg
cctgaaggtttccaggtggtaaaagtaggtgcaaatggtgaggttgagacattagagcaa
ggggagcttcagccccaggaagatcccaattggcagaaagatccagactatcagcctcct
gccaaaaagacaaaaaaaaccaaaaagagcaaacttcgttacacagaggagggcaaagat
gtggatgtttctgtgtatgactttgaagaagagcaacaagagggtttattatcggaagtc
aatgcagagaaggttgttggtaacatgaagcctccaaagccaacaaaaattaaaaagaaa
ggtgtaaaaaagacattccagtgcgagctgtgcagttatacgtgtccacgacggtcaaat
ttggatcgacatatgaaaagtcatactgatgaaagaccacataagtgccatctctgtggc
agagctttccgcacagtcaccttactgaggaaccacctaaatactcacacaggtactcgt
cctcataagtgcccagactgcgacatggcctttgtaaccagtggagaattagtgcggcat
cgccgctataaacacacccatgagaaacccttcaagtgttccatgtgtgactatgctagt
gttgaggtcagcaagttgaaacgtcacattcgctctcacactggagagcggccattccag
tgcagcttgtgcagttatgccagcagggacacttacaagctgaaaagacacatgagaacc
cattctggtgaaaagccgtatgaatgttatatctgtcatgctcggtttacccagagtggc
accatgaaaatgcacatcttacagaagcacacagagaatgtggccaaatttcactgtcca
cattgtgatactgtcatagccagaaaaagcgatttgggtgtccatttgcgaaagcagcat
tcctacatcgagcaaggcaagaaatgtcgttattgtgatgctgtgtttcacgagcggtat
gccctcattcagcatcaaaaatcccacaaaaatgagaagcgtttcaagtgtgaccagtgt
gactatgcgtgcagacaggagcggcacatgataatgcacaaacgaacccatactggagag
aaaccctatgcctgtagtcattgcgacaagaccttccgccagaaacagcttctggatatg
catttcaaacgctatcatgaccccaactttgtccctgctgcttttgtctgttctaagtgt
ggtaaaacatttacacgccggaacacaatggcaaggcatgctgataattgtactgggcta
gatggcatagatggagaaaatggaggtgaaaccaagaaaggcaaacggggaaggaaaagg
aagatgcgctctaagaaagaggagtcatcagacagtgaagaaaatgctgaaccagacctg
gatgacaatgaggatgaggaagaaactgctgttgaaattgaagctgaaccagaagtacag
cctgtgactccagccccaccaccagccaaaaagcgaagagggaggccgccgggcaagtcc
agccagcccaagcaaacccagcctacagcaatcattcaggttgaagaccagaacactggt
gcaattgaaaacattatagtggaagtcaaaaaagagcctgatgcagaaacagtagaaggt
gaagaagaagagccccaatctgctgtggtggaagctcccaatggagatctcactccagag
atgattcttagcatgatggaccggtga
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integrated database retrieval system
