Monodelphis domestica (gray short-tailed opossum): 100617223
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Entry
100617223 CDS
T01031
Symbol
CHM
Name
(RefSeq) rab proteins geranylgeranyltransferase component A 1
KO
K23460
Rab proteins geranylgeranyltransferase component A
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mdo01006
]
100617223 (CHM)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mdo04131
]
100617223 (CHM)
Prenyltransferases [BR:
mdo01006
]
Protein prenylation
Rab geranylgeranyltransferase
100617223 (CHM)
Membrane trafficking [BR:
mdo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
100617223 (CHM)
Endosome - Lysosome transport
Rab GTPases and associated proteins
100617223 (CHM)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDI
RAE1_2_domI_C
FAD_oxidored
NAD_binding_8
zf-TRM13_CCCH
Motif
Other DBs
NCBI-GeneID:
100617223
NCBI-ProteinID:
XP_007507483
Ensembl:
ENSMODG00000014364
LinkDB
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Position
X:complement(53928698..54193771)
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AA seq
540 aa
AA seq
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MADKLPSEFDVVVIGTGLPESIVAAACSRSGQCVLHVDSRSYYGGNWASFSFSGLLSWIK
EYQEKRDKEEWATWQELILETEEAIALRKKDQTIQHVEVICYASQESDEHVEELGVVQKN
PTSVTSASSNDPLDSMGTACSDTSELTAQLSEPDTAQEVPKGDMPLGNENCGGDAECSQS
PLEQEKAENVPVEDVDSTKKNRITYSQIVKEGRRFNIDLTSKLLYSRGLLIDLLIKSNVS
RYAEFKSVTRILGYQEGNVLQVPCSRADVFNSKKLSMVEKRMLMKFLTFCLDYEQHHDDY
KAYEDCTFSEYLKTQRLTPNLQHFVLHSIAMVSETSTSTLDGLRETRNFLQCLGRYGNTP
FLFPLYGQGEMPQCFCRMCAVFGGTYCLNHAVQCLVVDKGSGKCKAIIDQCGQRISAKHF
IVEDSCLSEQTCSNVTYRQILRAVLITDRSVLKADSDQQISVLTVPPQEPGSAAIQVIEL
CSSTMTCMKGTYLIHLTCPSSKKTAREDLELVVRKLFTPYDEAELGKTIVAISDRKIVEL
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcagataaactcccttcggagttcgatgttgtggtgatagggaccggtttgccagag
tccatcgttgcagctgcttgctcaaggagtggccagtgtgttctacacgttgattcaaga
agctattatggaggaaactgggccagtttcagcttttcaggactattgtcctggataaag
gagtatcaggaaaagcgtgataaggaagagtgggcaacatggcaagagctaatactggaa
acagaagaagccattgctcttcgtaagaaagaccagaccatccaacatgtagaagtcatt
tgttatgccagtcaggagtcagatgaacatgttgaagaacttggtgttgtgcagaaaaat
ccgacctctgtgacgtctgctagctcaaatgaccctctggactcgatgggcacagcttgc
tctgatacgtctgaattaacagcacagctcagtgagccagatacagcacaagaagtaccc
aaaggagatatgccactggggaatgaaaactgtggtggtgatgcggagtgtagccaatca
cctctggaacaggaaaaagctgaaaatgtacctgtagaagatgttgattcaaccaagaag
aataggattacttactcccaaattgttaaagaaggcaggagatttaatattgatttgacc
tcaaagctgctttattctcgaggattgttaattgaccttctaatcaaatcaaatgttagt
cgatatgcggagttcaaaagtgtcaccaggattcttggataccaagaaggaaatgtattg
caggtaccttgctccagagcagatgtttttaatagcaagaaactcagtatggtggaaaag
agaatgctgatgaaatttctgacattttgtttggactacgaacagcaccatgatgactac
aaagcttatgaggattgtaccttttcagaatacttaaaaactcaaagactgacacccaat
ttgcaacactttgtccttcattccattgcaatggtatcagagacatccaccagcacctta
gatggcctcagagaaacgcgaaactttcttcagtgtcttgggcggtatggcaacactccc
ttcttgtttcccttgtatggccaaggagaaatgccccagtgtttctgcaggatgtgtgcg
gtgtttggtggaacctattgtcttaaccatgcagtacagtgccttgtagtggacaaagga
tctggaaaatgtaaggcgatcatagatcaatgtggtcagaggataagtgcgaagcatttt
atagtggaagatagctgcctttctgagcaaacatgttcaaatgtgacctacaggcagatc
ttgagggcagtgctgattacagatcgatctgtactgaaggcagattccgatcagcagatt
tctgttttgacagtgccgccacaggagccaggatctgctgctatacaggtcattgagttg
tgctcttccaccatgacatgcatgaaagggacatatctcatccatttgacgtgtccatcc
tcaaaaaaaacagcaagagaagatttagagttagttgtgaggaaattgttcaccccatac
gatgaggcagagttgggtaagactattgtggccatttctgatagaaagatagttgaactt
tga
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