KEGG   Monodelphis domestica (gray short-tailed opossum): 100617443
Entry
100617443         CDS       T01031                                 
Symbol
HLTF
Name
(RefSeq) helicase like transcription factor
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
mdo  Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:mdo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mdo04121]
    100617443 (HLTF)
   03400 DNA repair and recombination proteins [BR:mdo03400]
    100617443 (HLTF)
Enzymes [BR:mdo01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100617443 (HLTF)
Ubiquitin system [BR:mdo04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    100617443 (HLTF)
DNA repair and recombination proteins [BR:mdo03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    100617443 (HLTF)
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_2 zf-C3HC4 DEAD zf-C3HC4_3 zf-RING_2 zf-RING_UBOX zf-RING_5 zf-ANAPC11 RING_XB3-XBAT31 zf-C3HC4_4 HDA2-3 zf-rbx1 zf-Nse Prok-RING_4 zf-RING_6
Other DBs
NCBI-GeneID: 100617443
NCBI-ProteinID: XP_007502123
Ensembl: ENSMODG00000021258
UniProt: F6TIA5
LinkDB
Position
7:209850071..209894911
AA seq 1014 aa
MSWMFRRTDAPQVFFKVDPLWKYLQSFQYGVHGTFSHCTYPNLFSPFEPEDVIPPDDFVA
GDEDLDSVLFGTLRGHVVGLRYYTGVVNNNEMVALQREPNNPYDKNAVKVNNVNGNQVGH
IKKELAAPLAYIMDNKLAQVEGVVHYGASNAFTMPVQMSFWGKEENRKAVLDQLKKHGFK
LGPPPKSSGFNFNSSWSSERAGPSYSVPVHAAVQMTTEQLKTEFDKLFEDLKEDDKTREM
EPAEAIETPLLPHQKQALAWMVSRENSKELPPFWEQRNNSYYNTITNFSEKEPPENVLGG
ILADDMGLGKTLAAIAVILTNFYDGNPLPVEKIKQLKEEHIIDRSAKQEENDDSEQVKEP
CKEGCTSNEEPSVSNVKEKSTDFMSEFTSTRPKRRKATVKYTESSDSEDLELNELPHKIK
ARPRQEQPMTKGRIKRSSKAKEDADFECALESSAPLKKKAMKKGATLVQCSKKIDTAEKP
RATLIICPLSVLSNWIDQFGQHIKSDVHLNLYVYYGPDRSKDPALLSKQDIVLTTYNILT
YDYGSRGDSPLHKIRWLRVILDEGHTIRNPNAQQTKAALDLEAERRWVLTGTPIQNSLKD
LWSLLSFLKLKPFTDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKTSKIKGKPV
LELPERKVFIQHITLTDEERQIYQSVKNEGRAAIGRYFNEGTVLAHYADVLGLLLRLRQL
CCHPHLFTNTSSSSGPSGDDTPEELRKKLISKMKLILSSGSDEECAICLDSLHIPVITHC
AHVFCKPCICQVIRSEQPNAKCPLCRNDLRAENLVECPPEELNCNTEKKTDLEWMSSSKI
NALMHALIELRKKNPQIKSLVVSQFTTFLSLLETPLKASGFVFTRLDGSMAQKKRVESIQ
CFQKTEAGSPTIMLLSLKAGGVGLNLCAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEV
VITKFIVKDSVEENMLKIQNKKRELAAGAFGTKKPNASEMKQAKINEIKTLIDL
NT seq 3045 nt   +upstreamnt  +downstreamnt
atgtcctggatgttcaggaggacggatgcgccccaggtgttctttaaagtagatcctctt
tggaaatatttgcagtctttccaatatggagtccatggaactttttcacactgcacctat
cccaatttattttccccttttgaacctgaagatgttatccctccagatgactttgtagct
ggtgatgaagatctagattcagttttatttggaactttgcgaggtcatgtggttggatta
cgatattacacgggagtggttaataataatgaaatggtggcacttcagagagaacctaat
aatccatatgacaagaatgcagtaaaagtaaataatgtcaatggaaatcaggtgggtcac
ataaagaaagaactggcagcccctttggcctacatcatggacaacaaactggcccaagtt
gaaggagtggtccattatggagcaagcaatgcttttaccatgcctgttcagatgagtttt
tgggggaaagaagaaaatagaaaagcagttttagatcagttgaagaaacatggatttaaa
ttggggcctccaccaaaaagttcaggatttaattttaatagcagttggagttctgagaga
gctgggccaagttatagtgttcctgttcatgcagctgtgcaaatgacaactgaacagctt
aaaacagaatttgacaaattgtttgaagatttaaaagaagatgataaaactcgtgaaatg
gaaccagctgaggctattgaaacaccattacttccacaccagaaacaagcattggcttgg
atggtttcacgtgaaaacagcaaagaactgcctccattttgggaacaaagaaataactcc
tactataacacaattaccaatttttctgaaaaggagccgcctgaaaatgttcttggagga
attttagctgatgatatgggtttgggcaaaactcttgcagccattgcagtgatcctaacc
aacttctatgatggaaatcctcttcctgttgaaaaaattaaacagttgaaggaggagcat
attattgatagatctgcaaaacaagaagaaaatgatgacagtgaacaagtgaaggaaccg
tgtaaagaaggatgtactagtaatgaagagcccagtgtttcaaatgtcaaggagaaaagt
acagatttcatgtcagaatttacaagtacccgtcccaaaagaagaaaagccacagttaag
tatactgaaagcagtgattcagaggacttggaattaaatgaattaccacataaaattaaa
gccaggcctagacaagaacagccaatgactaaaggcagaattaaaagatcttctaaggcc
aaagaagatgcagactttgaatgtgcacttgagtcatctgctcctctgaaaaagaaagcc
atgaaaaaaggagctaccttagttcagtgctctaagaaaatcgacactgcagagaaaccg
agagcaacattgatcatctgtcctctttctgttttaagcaattggattgatcagtttgga
cagcatataaaatcagatgtgcacttgaatttgtatgtttactatggtcctgatcgcagc
aaagatcctgccttgctttcaaaacaggatattgtattgactacatataatattttaact
tatgattatggaagcagaggggacagtccattacacaaaataagatggctgagagtaata
ctagatgaaggccataccatacgaaatccaaatgctcaacaaacaaaagctgcattagat
ctggaggctgaaagacgctgggtactgacaggtacgccaatccagaattcattaaaagac
ttgtggtcactgctttcctttttaaagctgaagccatttactgatagagaatggtggcac
agaacaatccagcgccctgtaacgatgggagacgaggggggacttcgacgtttacagtcc
ctaattaaaaatattaccctcagaaggacaaaaacaagcaaaattaaaggcaaacctgtt
ctggagttaccagagcgtaaagtatttattcagcacattacacttactgatgaagaaaga
cagatttaccagtctgtaaagaatgaaggcagagctgcaattggaaggtactttaatgaa
ggcactgtgctcgcacactatgcagatgtcttgggccttttgcttagattgagacaattg
tgttgtcatcctcatctttttacaaatacatcgtcttccagtggtccctcaggagatgat
acacctgaagaactacgaaagaagttgataagcaagatgaagttaatcctgagctctggc
tcagatgaagagtgtgccatttgcttggattctctccatattcctgttataacacattgt
gcacacgtattttgtaaaccatgcatttgccaagtaattcggagtgagcagccaaatgcc
aaatgccctttatgcagaaatgacttaagagcagaaaatttggtagaatgtcctccagaa
gaattgaactgcaatactgaaaaaaagactgatctagaatggatgtccagttcaaagatc
aatgctctaatgcatgctttgattgaattaagaaagaagaacccccaaatcaaaagttta
gttgtttctcaattcacaactttcctgtctttattagaaacaccacttaaagcatctggg
ttcgtgtttactcgtttggatggctccatggcccagaagaagagagttgagtcaattcag
tgtttccagaaaactgaagcaggatctcctacaataatgcttctttccctaaaagctggt
ggagttggtttgaatctctgtgcagcttctcgagtatttttaatggatccagcctggaat
cctgctgctgaagatcagtgctttgacagatgtcacagacttggccagaagcaagaagtg
gtcattacaaagttcattgtgaaggactctgtggaagaaaatatgctgaaaatacagaac
aaaaagagggaacttgctgcaggagcctttggaaccaaaaaacctaatgctagtgagatg
aaacaagccaaaattaatgaaatcaaaactttaattgatttgtaa

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