KEGG   Monodelphis domestica (gray short-tailed opossum): 100618198
Entry
100618198         CDS       T01031                                 
Symbol
ATG16L2
Name
(RefSeq) autophagy related 16 like 2
  KO
K20868  autophagy-related protein 16-2
Organism
mdo  Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:mdo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    100618198 (ATG16L2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mdo04131]
    100618198 (ATG16L2)
   03029 Mitochondrial biogenesis [BR:mdo03029]
    100618198 (ATG16L2)
Membrane trafficking [BR:mdo04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    100618198 (ATG16L2)
 Others
  Specific organelles associated proteins
   Auto phagosome
    100618198 (ATG16L2)
Mitochondrial biogenesis [BR:mdo03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    100618198 (ATG16L2)
SSDB
Motif
Pfam: WD40 ATG16 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML WDR90_beta-prop_4th Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_SPT8 Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_WDR75_2nd Beta-prop_WDR19_1st Ge1_WD40 Beta-prop_NWD2_C Cytochrom_D1 KxDL UPF0242
Other DBs
NCBI-GeneID: 100618198
NCBI-ProteinID: XP_016288728
Ensembl: ENSMODG00000007739
LinkDB
Position
4:complement(346933221..346954995)
AA seq 673 aa
MPGPGTFGPSSLPASPRCWKLHIVRQLQQRDRRQKTMFLDLVEAYHRLLEKSDLLAHFTE
KLPPELPNDPVHLPSGEEEARPVPDSCPSARGLQEEMGGGLARSSWSCGEPFGAYILMEV
QCADDCVHARGPGGGRGPPASQQSSPEPGEEAQVTCSSLSASSPLQMAYQVVEKNRALSA
QDGLLEEQRGRLAALEARARELEEMRQWLAQRVAGQQDRITEGKEAYDTLRAHASHQQGA
LRQLEEEGRELVERLVRVKMQAAEDQNYRNERIDRVKQARLSKELKKAVKKTVNITETID
PPAIPEPPPRKQDLLEVEACEKRWKRPFRSASATSMTLTRCMDVMKGLLDFRKRRGHSVS
GLPEARYPSIPVRGVSCLPARAQDVQEAHHSEVNAVCFSSNSSLLATGGADRLIHLWNVV
GGLLEADQTLEGAGGSVTSLEFEPSGCFLLAATYNKAAQLWKVGESQSKETLSGHTDKVT
AAKFKLTRQQAVTGSRDRTVKEWDLNKASCSRTIDGLSYCNDVVCGDHLIISGHNDQKIR
FWDSRVPRCIQVIPVEGKVTSLSISSDQLHLLSCSRDDTLKVIDLRANNIRQVFRADGFK
CGSDWTKAVFSPDKSYALAGSADGGLYIWDLESGKLETRLYGPHSAPINAVAWCFAGTHV
VSVDQGRKAVLWS
NT seq 2022 nt   +upstreamnt  +downstreamnt
atgcccggacctggaactttcggccctagctctttgcccgcctccccccgctgctggaag
ctgcatatcgttcgccaactgcagcagcgggaccggaggcagaagactatgtttttggac
ctggtggaggcttatcacagactcttggagaaatcagacctgttggcccatttcacagaa
aaactgccacctgagcttcctaatgaccctgttcatctcccttcaggggaggaggaggcg
aggccagtgccagattcctgcccatctgcccgaggacttcaggaggaaatgggaggagga
ctggctaggtcaagttggtcctgtggggagccttttggagcttacatcctcatggaagtg
caatgtgctgatgactgtgtgcatgctaggggcccggggggcggaaggggccctccggct
tcccagcagagcagcccagagccgggagaagaggcccaggtcacttgctcttctctctct
gcctcatcccctttgcagatggcatatcaggttgtggagaagaacagggccctgagcgcc
caggacgggctgctggaggagcagcggggcaggctggcggctctggaagccagggcgcgg
gagctggaggagatgcgacagtggctggctcagcgcgtggccgggcagcaggatcggatc
acggaggggaaggaggcctacgacaccctgcgggcccacgccagccaccagcaaggggcc
ttgcgacagctggaggaggaaggccgggagctggtggagaggctcgtccgagtcaagatg
caagcggccgaggaccagaattaccgcaatgagcggatcgacagggtgaagcaagccagg
ctttccaaggagctgaagaaggccgtgaagaagacggtcaacatcaccgagaccatagac
cctccggccattcctgagccccctcctaggaagcaggacctcttggaggtggaagcctgt
gagaaacgatggaaacgacccttcaggtcagcctccgccacttctatgactctgacacgc
tgtatggatgttatgaaggggctactggactttaggaagagaaggggccattctgtgagc
gggctccccgaggcccgctatccaagcattcctgtccgtggggtttcctgtctccccgcc
agagcccaggacgtccaggaggcccaccattcggaggtcaatgctgtgtgcttcagttct
aacagcagcctcttggccacggggggtgctgaccggctcatccacctctggaacgtggtt
ggaggcctcctggaagctgaccagacgttggaaggcgctggtgggagcgtgaccagcctg
gagtttgaaccatcgggctgcttcctgctggcagcgacgtacaacaaggccgcccagctc
tggaaggtgggcgagagccagtccaaggaaacactgtctggacacacggacaaagtgacc
gcagccaaattcaagctgacccggcagcaggcggtgactgggagccgagacaggacggtg
aaggagtgggacctcaacaaggcatcctgctcgcgaaccatcgacggcctctcctactgc
aacgacgtggtatgtggagaccacctcatcatcagtggtcacaatgaccagaagatccgc
ttctgggacagcagggtcccaagatgcatacaggtgattcctgtggagggtaaggtcact
tctctcagcatcagcagtgatcagctgcacctcctcagctgctcccgggatgacaccctt
aaggtcattgaccttcgggccaacaacatccgccaggtcttcagggctgatggcttcaag
tgtggatcagactggaccaaagctgtgttcagcccagataaaagctacgccctggctggg
tcggccgatggtggtctctacatttgggatctggagagcggcaagctggagaccagactc
tatgggccccacagtgcccccatcaatgcagtggcctggtgctttgctggtacacatgtt
gtgagcgtggatcaggggaggaaggctgtgctttggagttag

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