Monodelphis domestica (gray short-tailed opossum): 100618198
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Entry
100618198 CDS
T01031
Symbol
ATG16L2
Name
(RefSeq) autophagy related 16 like 2
KO
K20868
autophagy-related protein 16-2
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100618198 (ATG16L2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mdo04131
]
100618198 (ATG16L2)
03029 Mitochondrial biogenesis [BR:
mdo03029
]
100618198 (ATG16L2)
Membrane trafficking [BR:
mdo04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
100618198 (ATG16L2)
Others
Specific organelles associated proteins
Auto phagosome
100618198 (ATG16L2)
Mitochondrial biogenesis [BR:
mdo03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
100618198 (ATG16L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ATG16
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_SPT8
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_WDR75_2nd
Beta-prop_WDR19_1st
Ge1_WD40
Beta-prop_NWD2_C
Cytochrom_D1
KxDL
UPF0242
Motif
Other DBs
NCBI-GeneID:
100618198
NCBI-ProteinID:
XP_016288728
Ensembl:
ENSMODG00000007739
LinkDB
All DBs
Position
4:complement(346933221..346954995)
Genome browser
AA seq
673 aa
AA seq
DB search
MPGPGTFGPSSLPASPRCWKLHIVRQLQQRDRRQKTMFLDLVEAYHRLLEKSDLLAHFTE
KLPPELPNDPVHLPSGEEEARPVPDSCPSARGLQEEMGGGLARSSWSCGEPFGAYILMEV
QCADDCVHARGPGGGRGPPASQQSSPEPGEEAQVTCSSLSASSPLQMAYQVVEKNRALSA
QDGLLEEQRGRLAALEARARELEEMRQWLAQRVAGQQDRITEGKEAYDTLRAHASHQQGA
LRQLEEEGRELVERLVRVKMQAAEDQNYRNERIDRVKQARLSKELKKAVKKTVNITETID
PPAIPEPPPRKQDLLEVEACEKRWKRPFRSASATSMTLTRCMDVMKGLLDFRKRRGHSVS
GLPEARYPSIPVRGVSCLPARAQDVQEAHHSEVNAVCFSSNSSLLATGGADRLIHLWNVV
GGLLEADQTLEGAGGSVTSLEFEPSGCFLLAATYNKAAQLWKVGESQSKETLSGHTDKVT
AAKFKLTRQQAVTGSRDRTVKEWDLNKASCSRTIDGLSYCNDVVCGDHLIISGHNDQKIR
FWDSRVPRCIQVIPVEGKVTSLSISSDQLHLLSCSRDDTLKVIDLRANNIRQVFRADGFK
CGSDWTKAVFSPDKSYALAGSADGGLYIWDLESGKLETRLYGPHSAPINAVAWCFAGTHV
VSVDQGRKAVLWS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgcccggacctggaactttcggccctagctctttgcccgcctccccccgctgctggaag
ctgcatatcgttcgccaactgcagcagcgggaccggaggcagaagactatgtttttggac
ctggtggaggcttatcacagactcttggagaaatcagacctgttggcccatttcacagaa
aaactgccacctgagcttcctaatgaccctgttcatctcccttcaggggaggaggaggcg
aggccagtgccagattcctgcccatctgcccgaggacttcaggaggaaatgggaggagga
ctggctaggtcaagttggtcctgtggggagccttttggagcttacatcctcatggaagtg
caatgtgctgatgactgtgtgcatgctaggggcccggggggcggaaggggccctccggct
tcccagcagagcagcccagagccgggagaagaggcccaggtcacttgctcttctctctct
gcctcatcccctttgcagatggcatatcaggttgtggagaagaacagggccctgagcgcc
caggacgggctgctggaggagcagcggggcaggctggcggctctggaagccagggcgcgg
gagctggaggagatgcgacagtggctggctcagcgcgtggccgggcagcaggatcggatc
acggaggggaaggaggcctacgacaccctgcgggcccacgccagccaccagcaaggggcc
ttgcgacagctggaggaggaaggccgggagctggtggagaggctcgtccgagtcaagatg
caagcggccgaggaccagaattaccgcaatgagcggatcgacagggtgaagcaagccagg
ctttccaaggagctgaagaaggccgtgaagaagacggtcaacatcaccgagaccatagac
cctccggccattcctgagccccctcctaggaagcaggacctcttggaggtggaagcctgt
gagaaacgatggaaacgacccttcaggtcagcctccgccacttctatgactctgacacgc
tgtatggatgttatgaaggggctactggactttaggaagagaaggggccattctgtgagc
gggctccccgaggcccgctatccaagcattcctgtccgtggggtttcctgtctccccgcc
agagcccaggacgtccaggaggcccaccattcggaggtcaatgctgtgtgcttcagttct
aacagcagcctcttggccacggggggtgctgaccggctcatccacctctggaacgtggtt
ggaggcctcctggaagctgaccagacgttggaaggcgctggtgggagcgtgaccagcctg
gagtttgaaccatcgggctgcttcctgctggcagcgacgtacaacaaggccgcccagctc
tggaaggtgggcgagagccagtccaaggaaacactgtctggacacacggacaaagtgacc
gcagccaaattcaagctgacccggcagcaggcggtgactgggagccgagacaggacggtg
aaggagtgggacctcaacaaggcatcctgctcgcgaaccatcgacggcctctcctactgc
aacgacgtggtatgtggagaccacctcatcatcagtggtcacaatgaccagaagatccgc
ttctgggacagcagggtcccaagatgcatacaggtgattcctgtggagggtaaggtcact
tctctcagcatcagcagtgatcagctgcacctcctcagctgctcccgggatgacaccctt
aaggtcattgaccttcgggccaacaacatccgccaggtcttcagggctgatggcttcaag
tgtggatcagactggaccaaagctgtgttcagcccagataaaagctacgccctggctggg
tcggccgatggtggtctctacatttgggatctggagagcggcaagctggagaccagactc
tatgggccccacagtgcccccatcaatgcagtggcctggtgctttgctggtacacatgtt
gtgagcgtggatcaggggaggaaggctgtgctttggagttag
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integrated database retrieval system