Monodelphis domestica (gray short-tailed opossum): 100618334
Help
Entry
100618334 CDS
T01031
Symbol
CFAP52, WDR16
Name
(RefSeq) cilia and flagella associated protein 52
KO
K24728
cilia- and flagella-associated protein 52
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mdo03037
]
100618334 (CFAP52)
Cilium and associated proteins [BR:
mdo03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
100618334 (CFAP52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
Beta-prop_EML
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
NBCH_WD40
WD40_like
ANAPC4_WD40
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_VPS8
WDR54
Beta-prop_NUP159_NUP214
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_BBS7
Beta-prop_WDR75_2nd
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
DUF7082
Motif
Other DBs
NCBI-GeneID:
100618334
NCBI-ProteinID:
XP_003340387
Ensembl:
ENSMODG00000008363
UniProt:
F7EJN2
LinkDB
All DBs
Position
2:252714997..252780274
Genome browser
AA seq
621 aa
AA seq
DB search
MADADTLPEPEVLGLELQAVIGFNGHVPSGLICHPDQEHLVYPLGCTVLIESINTKKQYF
LHGHGNNVSCVTISLNGAYVASGQVTFMGFKADVILWDYAKKELIARLSLHKGKIEALAF
SPNSKYLVSLGGPDDGSVVVWSVTKRDAICGSPAAGFNVGNATTIIYSNCREEMFVTAGN
GTIRVWELDLPNRKIRPTECQTRQLKRVVLSIAMAEDDSFFYIGTTTGDILKLNPRTKLL
ADTGPVKDKFSGGVTTIKCLKMGSVLIGSGAGVVALCKSPSYKPIKKIQLQGGVTSVALR
GQGHQFFVGTEAAHIYCLSYTDFKAELIATCHSGAVQDIVFPFGTADLFATCSKEDIRVW
HTSSNRELLRITVPNMTCCAIDFMRDGKSIISAWNDGKIRAFTPETGRLMYVINNAHSIG
VTAIATTSDCRRIISGGGEGQVRVWEISPQSQKLEEALKEHKSSVSCIKVKKNNEECVTA
STDGTCIIWDLVRLKRNQMILANTLFQCVCYHPEEFQIITSGTDRKIGYWEVFDGTVIRE
LEGSLSGSINGMDISSEGVHFVTGGDDHLVKVWNYSDGEVTHVGVGHSGNIIRMKISPNN
EHIVSVSADGAILRWKCPFTS
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgctgataccctgccagaacctgaggtgcttgggctggaacttcaagcggtg
attggcttcaacggacatgtacctagtggtctgatatgccatcctgatcaggaacatttg
gtctatcctttgggttgcacagttcttattgaatcgataaacacaaaaaagcaatatttc
ctacatggacatggcaataatgtctcttgtgttactatttccttaaatggtgcatatgtc
gcttctggacaggttacctttatgggattcaaggcagatgtcattttatgggattatgca
aagaaggagctaattgctagattgtcacttcacaagggcaaaattgaagctctggctttt
tctccaaattccaaatacctagtatcattaggaggtccagatgatggaagtgtggttgtg
tggagtgttaccaagagagatgccatctgcggcagtcctgcagctggttttaatgttggg
aatgccacgacaatcatctattcaaactgccgagaagagatgtttgttactgctggaaat
ggaacaatccgagtgtgggaactggatctcccgaataggaaaatccggccaactgaatgc
cagacaagacagttgaaaagagtagtgctaagtattgcaatggcagaggatgatagtttt
ttctacattggtacaacaactggagacatccttaaattgaaccccagaacaaaactatta
gctgacacgggtccagtcaaggacaaattcagtgggggagttacaactatcaagtgtctg
aagatgggaagtgtgctaataggctctggagcaggagtggtggctctttgtaaaagccca
agctacaaaccaatcaagaaaattcagttacaaggtggagtcacctctgttgcactccga
ggtcaagggcaccagttctttgttggaacagaagcagcccatatttattgcctcagttat
actgattttaaagcagaactcattgctacctgtcacagtggtgctgtacaggacattgtt
ttcccatttggcactgctgacttgtttgccacatgttccaaggaagatatccgagtatgg
catacgtcttccaatcgagaactcttaaggatcactgtgccaaatatgacctgctgtgct
attgacttcatgagggatggcaaaagcatcatttcagcatggaatgatggcaaaatccgt
gcattcactccagagacaggtcgactgatgtatgtcataaacaatgctcatagcattgga
gtgacagccatagctactacaagtgattgcagaagaatcatcagtggaggtggtgaaggg
caggtgagggtatgggaaataagccctcaatcgcagaaactggaagaagctctaaaggag
cacaaatcatcagtatcctgcattaaggtaaagaagaataatgaagagtgtgtcacagcc
agcacagatgggacttgcattatttgggaccttgtacgtctgaagaggaaccagatgatt
ctagccaatactttatttcaatgtgtttgttatcatccagaagaatttcagattatcacc
agtgggacagacagaaaaatcggttactgggaagtgtttgatgggacagtaattagagag
ctggaaggctccttgtctggttcaatcaatggaatggatatttcatcagaaggagtgcat
tttgtcacaggtggggatgaccatttagtcaaagtgtggaattatagtgacggtgaagtg
acccacgttggggtgggacacagtggcaacattatccgcatgaagataagccccaataat
gagcacattgttagtgtaagcgcagatggagcaattttgagatggaaatgcccttttacc
tcttga
DBGET
integrated database retrieval system
