Monodelphis domestica (gray short-tailed opossum): 100619194
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Entry
100619194 CDS
T01031
Symbol
PRDM1
Name
(RefSeq) PR/SET domain 1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdo03000
]
100619194 (PRDM1)
Transcription factors [BR:
mdo03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
100619194 (PRDM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
C2CH-3rd_BIRD-IDD
zf-C2H2_6
Zf-C2H2_ZNF451_C
zf-C2H2_jaz
zf-met
zf-C2HE
B129_C2H2-zf
STL11_N
zf-C2H2_FBX41
Motif
Other DBs
NCBI-GeneID:
100619194
NCBI-ProteinID:
XP_003340522
Ensembl:
ENSMODG00000018029
UniProt:
F6ZWK9
LinkDB
All DBs
Position
2:370550591..370641968
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AA seq
827 aa
AA seq
DB search
MLDFCLEKLVDTTLAATQCSSNTVNFPTLVEGTEGTMKMDMEDADMTLWTEADFEEKCTY
IVNDHPWDSGAEGGTAIQAEASLPRNLVFKYAPNCKEVIGVISKEYIPKGTRFGPLIGEI
YTNDTVPKNANRKYFWRIYSNGELHHFIDGFNEEKSNWMRYVNPAHSVQEQNLAACQNGM
NIYFYTIKPIPANQELLVWYCRDFAERLHYPSSGELMRMNLTQTHISPKQQSTEKNELYP
KSVPKREHSVKEILKNDSNHSKGKNFFHTNISPITPEKDMDNLRKNYSPERPICPRVIYP
IRVPNPEDLLKTSLTYRMERPTYITHSPIPSSTTPSPSAISSPDQSLKSSSPHGSLGDTV
SPLAPISQEHRESYSYLNTHYGTEGLGSYPGYIPPPSHLSPAFFPSYNTHYPKFLLPPYG
MGCNSLSTVNNINNISNFNIFPRLYPFYSNMLSGGGNLPPTVFNPATLPNSLPSEGSRRL
LQPEHPRDVLIPAPHSAFSITSAATSMKDKPCSPTSGSPTAGTAATSEHMIQPKATSAML
AANSSEEAMNLIKSKRNMTGYKTLPYPLKKQNGKIKYECNVCSKTFGQLSNLKVHLRVHS
GERPFKCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKP
YQCKLCPAKFTQFVHLKLHKRLHTRERPHKCTQCHKSYIHLCSLNVHLNGYCPLAPTSGL
PMEDLTRVNEEIEKFDISDNADRLEDAEDAADMTSVVEKEILALLRREMEGANLKMSLQR
NMGNGLISSGCNFYETSDPSLMKLPHSHPLPLLPVKVKQETVEPMDP
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgttggatttttgtttggaaaaacttgtggatacgaccttggctgccacccagtgtagc
tccaacaccgtaaattttccgaccttggtagaggggacggagggaaccatgaaaatggac
atggaagatgctgacatgactctctggacagaggcagattttgaagaaaaatgcacatac
attgtgaatgaccacccctgggactctggtgctgaaggaggaactgccattcaggccgag
gcatctttgccaaggaatctggttttcaaatatgcaccgaactgcaaagaggttattgga
gtaataagcaaagaatacataccaaaaggaacacgttttggacccctgataggtgaaatc
tataccaatgatacagttcccaagaatgccaacagaaaatatttttggcggatctattct
aatggggaacttcaccatttcatcgatggctttaatgaggaaaaaagcaactggatgcgt
tatgtgaaccctgctcactctgtgcaggagcagaatttggccgcatgtcagaatggaatg
aacatctatttctacactattaagccaatccctgccaaccaggaacttcttgtgtggtat
tgtcgggactttgcagaaagactccactatccttcctccggagagctgatgaggatgaat
ctcactcaaacacacatcagtccaaagcaacagagcactgagaaaaacgagctttatccc
aaaagtgtcccaaagagagagcacagtgtgaaagaaattctgaaaaatgattccaaccat
tcaaaaggaaagaacttcttccatactaacatttcacccatcactccagaaaaggacatg
gataacttgaggaaaaattacagccccgaaaggcctatttgccctcgcgttatctaccca
attcgggttcccaatccagaagacttgttgaaaacttctctgacctacaggatggagaga
cctacttacattactcattcccccatcccatcatccaccactcctagcccctcagcaata
agcagtccagaccaaagcttaaaaagctccagccctcatggaagcctgggggatactgtt
tcacctttggctcccatttctcaagaacatcgagaatcttactcttacttgaatacacat
tatggcacagaaggattggggtcttaccctggctatataccaccacctagtcacctttct
ccagctttcttcccctcttataatactcattatcccaagttccttttacctccatatggt
atgggctgtaatagcctgagtactgtgaacaatataaataacatcagtaacttcaatatc
ttcccaagattatatccattctacagtaacatgctcagtggaggaggtaacttgcctcct
actgtgttcaacccagctactcttccaaattcattgccttctgaaggatcccggagatta
ctacaaccagaacaccccagagatgtcctcatacctgcaccccacagtgccttttctatc
accagcgcagccaccagtatgaaagacaagccatgtagcccaacgagtgggtccccaact
gctggaacagctgccacatctgaacacatgatacaacctaaagctacctcagcgatgttg
gcagccaacagcagtgaagaagccatgaatctcattaaaagtaagagaaacatgactggt
tacaaaacacttccatatccactgaagaaacagaatggaaagattaagtacgagtgtaat
gtttgttccaagacttttgggcaactctcaaaccttaaggtccacctcagagtgcacagt
ggagagcgaccattcaaatgtcaaacttgcaataagggtttcactcagcttgcccacctg
cagaaacactacttggtccacactggagaaaagcctcacgaatgtcaggtctgtcacaaa
cgattcagcagcaccagcaacctgaagacccacctgcgacttcactctggagagaaacca
taccagtgtaagctgtgcccggccaagttcacccagtttgtgcacctgaaactccataag
cgcctacacactcgagagaggccacacaagtgtactcagtgccacaagagctacatccac
ctctgtagtctcaacgttcacctgaatggttattgccccctggccccaacctccggtctg
cccatggaggacctgacccgagtcaatgaagaaatagaaaagtttgacatcagtgacaat
gcagaccgactggaagatgcagaggatgctgccgatatgacctctgtggtggagaaagaa
atcctggctttgctcagaagagagatggaaggagccaacctgaaaatgtctttgcaaagg
aacatggggaatggactcatctcctcagggtgtaacttttacgagacatcagacccatcc
ctcatgaagttgcctcacagtcacccactacctctgttacctgtaaaggtcaaacaagaa
acagttgaaccaatggatccttaa
DBGET
integrated database retrieval system
