Monodelphis domestica (gray short-tailed opossum): 100619705
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Entry
100619705 CDS
T01031
Symbol
PCDH19
Name
(RefSeq) protocadherin 19
KO
K16499
protocadherin delta 2
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mdo04515
]
100619705 (PCDH19)
Cell adhesion molecules [BR:
mdo04515
]
Cadherins
Protocadherins
100619705 (PCDH19)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
100619705
NCBI-ProteinID:
XP_007507578
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Position
X:65153882..65267461
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AA seq
1097 aa
AA seq
DB search
MDSFLPMLLLEALLWTQASSLINLKYSVEEEQRAGTVIANVAKDAREAGFLLDARQPAFR
VVSNSAPHLVDINPNSGMLVTKQKIDRDLLCHQSPKCVISLEVMSSSMEICVVKVEIKFL
NDNTPIFPNSQIELEISETASPGTRIPLDGAYDPDSGSFGVQTYEITPNDLFGLEVKTRG
DGSRFAELVVEKNLDRETQAYYNYRITALDGGDPPRMGTVGLGIKVIDSNDNNPVFPEAT
YVVSVPENAPLNTPVIHLNATDPDEGTNGEVVYSFYGYVNEKARGLFQIDPHSGLISVSG
AIDYEQGRVYELDVQAKDLGPNSIPAHCKVTVTVLDVNDNAPVINLLSVNSELVEVSESA
PPGYVIALVRVSDRDSGANGRVQCRLLGNVPFRLQEYESFSTILVDGRLDREQRDQYNLT
IQARDGGVPSLQSTKSFTVKITDENDNHPHFSKAYYQVIVQENNTPGAYLLSVSARDPDL
GLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGNPS
LQSNATVRVIVLDVNDNTPVITAPPLVNGTAEVYIPRNAGVGYLVTVVKADDYDEGENGR
VTYDMTEGDRGFFVIDQANGEVRTTRTFGDSSKATYEIIVVAHDHGKTSLSASALVLIYL
SPTLDAQESVGSVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCRIAEYSY
GHQKKSGKKKKINKNDIRLVPRDVEENDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRRSE
STFLNVESQGGRGAGSNNIYHHTFTVQSAQQPDLIINGVPLPETENYSFDANYVNNRAHL
IKSSSTFKDLEGNSLKDSGHEESDQTDSEHDIQRGLYCDTAVNDVLHSSGASVGAQLPDH
DQNEGFHCREECRILGHSDRCWMPRNPLPTRAKSPDRGRNIITLSIEATAADVEVYEDCT
TKRTFATFGKDVGDHAAEDRSAQKGKRAVDLSVCSPKVTSAIREAGNGCEAISPVTSPLH
LKSSVAAKPTMVTYSAIIHCPATHTVEQFPNNGPSRPTEAEPRGADSEKVVREVNPLLEE
SPEKESPGAKRVKDIVL
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggattcttttttgcccatgctgctcctcgaggctttactatggactcaggcgtcatct
ttgattaacttaaaatactctgtagaggaggagcagcgagcgggcacagtgattgcaaat
gtcgccaaagatgcccgggaagccggctttttgctggacgcccggcagcccgccttccgg
gtggtctccaactcggccccccacctggtggacatcaaccccaactctgggatgctggtc
accaaacagaaaatcgaccgggacctgctgtgccaccagagccccaaatgcgtgatctcc
ctggaggtgatgtccagctccatggagatctgcgtggtcaaggtggagatcaagttcctg
aacgacaacacgcccatcttccccaactcgcagatcgagctggagatctccgagacagcc
agccctggcacgcgcatccccctggacggcgcctacgacccagactcgggcagtttcggg
gtgcagacgtacgagatcacgcccaacgacctctttggcctggaggtgaagacgcgcggc
gacggctcccgcttcgccgagctggtggtggagaaaaacctggaccgcgagacccaggcc
tactataactaccgcatcacggccctggacgggggtgacccgccgcgtatgggcaccgtg
gggctcggcatcaaggtgatcgactccaacgacaacaacccggtgttcccggaagctacc
tacgtggtgagtgtcccagagaacgcacctctcaacacgcccgtcatccacctcaacgcc
accgaccccgacgagggtaccaacggcgaggtggtctactccttctacggctatgtcaac
gagaaggcccgcggcctcttccagatcgatccgcacagcgggctcatctccgtgagcggg
gccattgactacgagcagggccgcgtctacgagctggacgtgcaggccaaggacttggga
cccaactccatcccggcccactgcaaggtcacggtgaccgtgctggacgtcaacgacaac
gcgccggtcatcaacctgctgtcggtcaacagtgagctggtggaggtgagtgagagtgcc
ccaccgggctacgtgatcgccctggtgcgggtgtccgaccgcgactcgggcgccaatggt
cgggtgcagtgccgcttgttgggcaacgtgcccttccgcctccaggagtacgagagcttc
tccaccatcctggtggacgggcgcctggatcgcgagcagcgggaccagtacaacctgacc
attcaggcccgcgacggcggcgtgccctctctgcagagcaccaagtccttcactgtcaag
atcacggacgaaaacgacaaccacccccacttctccaaggcctactaccaggtcatcgtg
caggagaacaacactcctggggcctatctgctctcggtctcggccagggacccggacttg
ggcctcaacggcagcgtctcctaccagattgttccctcgcaggtgcgggacatgcctgtc
ttcacctacgtgtccatcaaccccaactcgggggacatctacgccctgcgctccttcaac
cacgaacagactaaggcgttcgagttcaaggtgctggccaaggacggtggcaatccgtcg
ctgcagagcaatgccaccgtccgggtcattgtcctcgacgtgaatgacaataccccggtg
atcacggcgccgcccctggtcaacggcacggccgaagtctacatcccccgaaacgcgggg
gtgggctacctggtgaccgtggtcaaggccgatgactacgacgagggggagaacgggagg
gtcacctatgacatgaccgagggcgaccggggctttttcgtgatcgaccaagccaacggc
gaggtccgcaccacccggaccttcggggacagctccaaagccacctacgagatcatcgtg
gtggcccacgaccacggcaagacctccctgtcggcgtccgccttggtcctgatctacctg
tccccgactctggacgcgcaggagtccgtgggctcggtgaacctgtccctgattttcatc
atcgctctgggctccatcgctgccattctcttcgtcaccatgatcttcgtggcggtgaaa
tgtaagagggacaacaaggagatccggacctacaactgcaggattgccgagtactcgtac
gggcaccagaagaagtcgggcaagaagaagaagatcaacaagaacgacattcgcctggtt
ccccgggatgtggaggagaacgacaagatgaacgtggtcagctgctcctccctgacctca
tccctcaactacttcgactaccaccagcagaccctgcctctgggctgccgccgctctgag
agcaccttcctgaacgtggagagccagggcggccggggcgcgggctccaacaacatctac
caccacaccttcacggtgcagagtgcccagcagcccgacctgatcatcaacggggtgccg
ctccccgagacggagaactactcctttgatgccaactacgtgaacaaccgggcccacttg
attaagagcagctccacattcaaggacttggagggaaatagcctgaaggacagcgggcat
gaggagagcgaccagactgatagcgagcatgacatccagcggggcctgtactgcgacacc
gctgtcaatgatgtcctgcatagcagtggcgcctccgtgggagctcagcttcctgaccat
gatcaaaatgaaggctttcattgcagggaggaatgtcgcattctcggtcattcagaccgg
tgctggatgccccggaatcctcttcctactcgggccaagtctccggatcgtggaagaaac
atcatcaccctgtctattgaagccactgccgccgatgtggaggtttacgaagactgcacc
accaagaggacttttgcgaccttcggcaaggatgtcggtgaccacgcagctgaagaccgt
tctgcccagaaaggcaagagagcagttgacctgtccgtctgcagccccaaggtcaccagt
gccatccgtgaggcaggcaacggttgcgaagccatcagcccggtcacttcgcccctccat
ctgaagagttctgtggccgccaagccaacaatggtcacctacagtgccatcattcactgc
cctgctacccacaccgtggagcagtttccaaacaatgggccttctcgtcctactgaagca
gaacctcgaggagctgacagcgagaaagtggtgcgcgaagtcaaccctctcctagaggag
agcccggagaaagaatccccgggagccaagagggtgaaggacatcgtgctgtaa
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