Monodelphis domestica (gray short-tailed opossum): 103092024
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Entry
103092024 CDS
T01031
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03013
Nucleocytoplasmic transport
mdo03015
mRNA surveillance pathway
mdo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103092024
09122 Translation
03013 Nucleocytoplasmic transport
103092024
03015 mRNA surveillance pathway
103092024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdo03019
]
103092024
03041 Spliceosome [BR:
mdo03041
]
103092024
Messenger RNA biogenesis [BR:
mdo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103092024
Spliceosome [BR:
mdo03041
]
Complex C
Other components
EJC/TREX
103092024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP
Motif
Other DBs
NCBI-GeneID:
103092024
NCBI-ProteinID:
XP_016281991
LinkDB
All DBs
Position
1:complement(172362192..172385909)
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AA seq
709 aa
AA seq
DB search
MAELEEVTLDGKPLQALRVTDLKAALEQRGLAKSGQKSALVKRLKGALMLENLQKHSTPH
TAFQPNSQIGEEMSQNSFIKQYLEKQQELLRQRLEREAREAAELEGKSCSISEEKGESDD
ERPRKGERRSSRVRQARAAKLSESSLATEEEEERETPSRNLRARADRNVKTEEEEEEEEE
EEEEEEEEEEEEEEEEEEMQKVVDLPVLKQFQGGKEESRAAFQEAVEGVTKGIGSQEQEG
LEKGGRVTGAQEEGEVCQLARPQQEKGVKLSEVEVKAEEENKGEKEVKAVKSPERKQKSP
SPPRLTEDLLKVSLRPQPEQVAREEETPPPLLTKEASTPPAPSEPTTGEETEPLEGPAPP
DLTQRSPPFEEAEAKELLISPHTVQVVGRLPSLPSPPGTKARSPIEISQEGTSLISTERS
TGTRPPTEKALQSESEHSGPLIALKAEESNLIKVNTEVPLEQPSSLVQKERKGDSPTPLP
SHRTKRSADSSPSSQSSSSSSTSRSRSHSPDSSGSRSQSPPRSKQRDSSWSRSCSNPRSG
TKVGSRSTSESRSRSRSRSRSASSNSRKSRSPGVSRDSSTSYSHTKDPSPGQEVAPLSSP
SVLQQQVLEPKERTTISPAFAPMRGMSQAEPVEKHKTQRLKPERGSPKKSEAEEAEPPAA
TERAPEVQTPQQPASGKIQHIVVGTTSFERCLFFLLEMGALFSGKEFFF
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctggaggaggtgactctggacgggaagccgcttcaggcgctgcgggtgacc
gacctgaaggccgcactagaacagcgaggcctggccaagagtggacagaagagtgccctg
gtcaagcggctcaaaggggctctaatgctggagaatttacagaaacactcaacaccccac
actgcattccagccaaactcccagattggtgaggagatgagccagaatagcttcataaag
caatatctggaaaaacagcaggagctgctcaggcagcgactggagcgagaagctcgagaa
gccgcagaacttgaaggaaaaagctgttctatctctgaagaaaaaggtgaatctgatgat
gaaaggccaagaaaaggagagagacggtcatccagggtgagacaggcacgagcagccaaa
ctctcggaaagcagcctagctactgaggaagaagaggaacgggaaacaccttccagaaat
ctgagggccagagcagatcgaaatgtgaaaacagaggaagaggaagaagaggaagaggaa
gaagaagaggaggaagaggaggaggaagaggaggaagaagaagaagaggaggagatgcaa
aaagttgttgatctgccagttctgaaacaatttcaggggggaaaggaagaatccagagca
gcatttcaggaggcagtggagggggtaaccaaaggcataggatcccaagaacaggaagga
ctggaaaaaggaggaagagtaacaggggcccaggaggaaggtgaagtctgtcagctagcc
agaccacaacaagagaaaggtgtgaaattatcagaagttgaagtaaaggcagaggaagag
aacaaaggagaaaaagaagtaaaagctgtaaaatccccagaaagaaaacaaaagtctcct
tccccacctcggctaactgaagatctgctaaaggtgtcccttaggccacaaccagagcaa
gtggctagagaggaagaaactcccccacccctgctgaccaaggaagcatccactccacca
gcccctagtgagcccaccactggagaagaaacagaaccattggaaggcccagctcctcct
gaccttacccagaggtctcctccttttgaagaggctgaggccaaagaactacttatatcc
ccacatactgtccaagtggtaggaaggctgccttccttgccaagccctcccggcaccaaa
gcaaggtctccaatagagatatcacaagaggggacttcccttatttcaacagaaagaagc
acagggactagacccccaactgagaaggctcttcagagtgaatcagagcattctggccca
ctgattgctctgaaagctgaggaatcaaacctaatcaaggtgaacactgaggttcccctt
gaacagccatcatctttggtgcagaaggaaagaaaaggagactcccccacccctctccca
agccacaggacaaaacgttcagctgactcatcaccctccagccaatcttcttcatcttct
tccacttctcgttcaagatcccactctccggacagctcaggctcgagatcccaatcaccc
cccagatctaagcagagggactcatcttggtcacgctcttgttccaacccacgttcagga
accaaagtgggctccaggtcaacatcagaatctaggtcccgttctcggtcccgttcccgt
tcagcatcaagcaacagtaggaaatctcggagccctggagtctccagggatagcagcacc
agctactcccacaccaaagatccctctcctgggcaggaggttgcacctctcagcagtccg
tcagtgctacaacagcaggttcttgaaccaaaagagaggactaccatctctccagccttt
gccccaatgaggggtatgagccaggctgaaccagttgagaagcataagacccagaggttg
aaaccagagcgggggagccccaagaagtctgaagctgaagaggcagaaccacctgctgcc
acagagagagcaccagaggtgcagacccctcagcagccagcctcaggaaagattcagcac
attgtggttggcaccacttcctttgagagatgtctgtttttccttcttgaaatgggtgca
ttattctctggaaaagagtttttcttctag
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