Monodelphis domestica (gray short-tailed opossum): 103103061
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Entry
103103061 CDS
T01031
Symbol
RP1
Name
(RefSeq) RP1, axonemal microtubule associated
KO
K19538
retinitis pigmentosa 1
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mdo03037
]
103103061 (RP1)
04812 Cytoskeleton proteins [BR:
mdo04812
]
103103061 (RP1)
Cilium and associated proteins [BR:
mdo03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
103103061 (RP1)
Cytoskeleton proteins [BR:
mdo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
103103061 (RP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLAT
DCX
DUF7755
FGF
DCX2_DCDC1
Glyco_hydro_63N
Motif
Other DBs
NCBI-GeneID:
103103061
NCBI-ProteinID:
XP_007487288
LinkDB
All DBs
Position
3:complement(185352127..185852241)
Genome browser
AA seq
1905 aa
AA seq
DB search
MTNGIYIPVKMSETPSTNFSMIHAASSEGQTSYPRHFNVTQPVVAKRISFYKSGDPQFNG
IQMVVNPRSFKSFDALLDNLSKKVPLPFGVRNISTPRGIHGITKLEDLEDGRSYICSHKK
KIKPIDLEKARQKPLPWQSSRPVSGHRRAAQLARAKEFSLTHQELPLVVQTPRKLLVFKN
GEPKTRHAIILSRKITRNFEAFLDYLTELMQYPVVKLYTTDGRKVPSLQAVILSSGAVVA
AGREPFKPGNYDLLKYLLPGQLPRISKRIYPKGQTKPESRKNGNWKVSIITSELPGAGTS
SQIYIVLYGHRRSSAPIYLYGTGGDPFQEGREDIFTLKTGDIGELYKIRIGHSNSGLSPA
WHCKEIKLQNLFSGEQFYIPVCRWLAQDREDGEICRELPVFQKGQPIIPVTVYEVRVTTG
DWWNAGTESRVYISVYGEKGDTGSRQLFRSKNPKKFLKGQTDIFSLEAVNLGYLYKVVIA
HDGLGSGNGWFLDDIVIKDPTTDLEYAFLCHRWLDHGEDDGKIFRELCASDNSTFFGRQK
LELQRKEAWAVESWKLKKGNILQFYNRLSGGFVRLHPDGTVDALGEKTDKNGLFDVIVKR
RNICIFQSHQTRNLSLALDISGMATGMPDGGVTCELRVLHLPNRCAILESVMVPGLTVAF
NSQGKVADESTNSYAGLSKEFAIYAKGVFHNSAVILLNTSLCQALTLQSDGSCSGAGNQS
EESHWKVHKISSGVCMFESVKNPRMFLRIKNGHCDGRGTGDLDCHFKIQRNLENGSISLE
SVKSKGLFIGLLPDGQTKPVLYTKDTGVFFYPQVIQFGREKPMGTSATASQQEEKARESG
NQAEAASQYMAHSPSHSLASTEFRNTSTSDTVLLSDDEWQVLVLTGNTGTQANVTLWVYG
DKGVIGPLPLGKGSKEQLFLPRKENEFQVQIQNIGKIYKIRIGHDGTSEQPEWSLQMVKM
KHLKSGKTLNFAANKCLSRIQGDGDIVCELPVEEDGKALFPIVRYHVYVYTGQLKEAETT
SAVYLCLYGERGDSGVRLLYKSDKPIKFQRGQIDKFQVEAVSLGKLQKALLLCKATDQSE
YWYCEKVIIREPMKESESIFNCERWLPFMSQGIIHSEIELYPQEMQIKHQPKTQEEANEG
DWKITVVTGDFEKAGTTATVSLYAYGEKMSSGPIILGSGKHQLFNPNSADIFKINLKDIG
ELYKIRIEHDNSGKDPSWYLEEIKLEEIDTGKVFSLTVDCWIPENENDGDTCKEIAINQP
YKKPLPLVIYEIHVYTGSKLGAETDSNVLINLIGTRGDSGKRRLHKSMNNQVKFQQGQVD
IFVIKSVSLGELKKVLISHDGTGPGNGWFLEKIIIKFKEDKEDQEVLFPCERWLDEYQED
GKTERELTAENGQWIIQVKTAEDSPEAKECKRTVVIYGSKGKSRELLLSPQNPGQICFLP
GALDEFLIETGDVGDVYKIRVSCDDLPGFEGWHLKSFHIEELHTKQEMNFDCSCWFSLNR
EDGELVKEFPAETKDRNPLPVVKYIVTIYTGDQWGAETFANVYITLYGQRGDSGARKLYR
SLKKGELFQRNKLDIFLIEAVSLSHLEKVLFEHDGEGYGAGIYLKMITIQESKDPEIEWV
FPCWNWLDSHLGAYLTISELKTIGKRLICTPEKPLINGHSPGSWIVDINGSGLSTKEGMM
ELSLVFYGHLNHKKLTLHMTENRAQIKDALEGIGALYKLQVSGTSIQLKKSWHLDTVNLK
HTGTILEMWLIFDSWFRPNEEDCVELPTLISGQDPLPVIEYSIEIHTGDVKNAGATGQAY
IYIKGERGDSGKRWINNSRSSPTTFSRGQVEVFTVKAVHLGKLHQIILGFQSLKKDNWFL
DKVVIKEEHSSTITYIFVHHSWINKDPEKEFGEVIIPLKGYTNPT
NT seq
5718 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatggaatttatattccagtcaaaatgagtgaaactccgtccactaacttttca
atgattcatgcagcctcttctgaaggtcaaacttcttatcctcgccacttcaatgtcact
caaccagttgtggccaaaaggattagtttctataagagtggagaccctcagttcaatggg
atccagatggttgtcaatccccgttccttcaagtcttttgatgccttgcttgacaacttg
tctaagaaggtcccattaccctttggagtcaggaatatcagcaccccacgtggtatccat
ggcatcacaaagctggaagacctagaggatggcaggtcatacatctgttcccacaagaag
aaaataaaacccattgacctggagaaggctcgccagaagcccctgccctggcagagcagt
agacctgtcagtggtcatcgccgagctgcgcaattggccagggcgaaggagtttagcctg
actcatcaagagcttcctctggtggttcagacacccagaaagctcttagttttcaaaaat
ggtgaaccaaagactaggcatgccatcattctgagtaggaagatcactcggaactttgaa
gcctttctggactacctgactgaactcatgcaatacccagttgtgaagctgtacaccaca
gatggaagaaaggtgcccagcctacaggcagttatattgagctctggagctgtagtggct
gcaggaagagaaccatttaaaccaggaaattatgaccttctgaaatacctgcttcctggt
caattaccaaggatatctaaacgcatatacccaaaaggacaaacaaaaccagaaagcaga
aaaaatggtaattggaaggtgtcgataattaccagtgagttgccaggtgcaggaaccagc
tcccagatttatattgtattatatggacaccgcagaagttcagcacctatctatctttat
ggaacaggtggggacccatttcaagaaggccgagaagatatcttcacactaaagactgga
gatatcggggaactctacaagatacgtattggccacagcaattctggactttctcctgcc
tggcattgtaaagagataaaactgcagaaccttttctcaggggaacaattttatatccct
gtttgccgctggttggctcaagatcgagaggatggagaaatctgtcgggaattgcccgtt
tttcaaaaaggccagccaatcattccagtgacagtgtatgaggtacgtgtgaccacagga
gactggtggaatgctgggacagaatcaagagtctacatctctgtctatggagagaaagga
gatacaggctccaggcaactgtttagatcaaagaaccccaagaaatttttaaaaggacaa
actgacatcttctctcttgaagcagtgaaccttgggtatttgtacaaggttgttatagca
catgatggacttggttcaggaaatggttggtttcttgatgatattgtgatcaaagatcct
accacagatctggaatatgccttcttgtgtcacagatggctggatcatggagaggatgat
gggaaaatttttagagaactgtgtgctagtgataatagcactttttttgggagacagaag
ttggaacttcaaagaaaagaagcttgggctgttgaaagctggaaactgaagaaaggaaac
attcttcagttctacaaccgacttagtggaggctttgtccgtcttcaccctgatggcact
gttgatgcacttggagaaaagacagacaaaaatggactttttgatgtcattgtgaaaaga
agaaacatatgcatctttcaaagtcatcagacaagaaatctttctcttgcccttgatatc
tctggaatggctactggaatgccagatggtggagttacatgtgagcttcgagtcctccat
ctgcctaatcgctgtgccattctggaatcagtcatggtccctggtctgacagttgctttc
aatagtcaaggcaaagtagctgacgaatcaacaaacagctatgcagggctctcgaaagaa
tttgcgatatatgctaagggtgtgttccacaacagtgcagtaattctgctcaataccagc
ttatgccaggctctgaccctccagtctgatgggagctgcagtggagcaggaaatcaatct
gaagaatcccactggaaagtacataaaatcagctctggggtttgcatgtttgaaagtgtg
aagaatccaagaatgtttcttaggatcaagaatggccactgtgatggaagaggcacagga
gatctcgactgtcactttaaaattcagaggaacttggaaaatggatccataagtctggaa
tcagtgaaaagtaaaggcctgttcattggacttctgccagatggtcagacaaagccagtt
ctttatactaaagacacaggtgttttcttctatccacaagtcattcaatttggcagggaa
aaaccaatgggaacatctgcaacagctagccaacaggaagaaaaggccagagaatctggg
aaccaggcagaagcagcatctcagtacatggcccacagcccatcccactctctggcctca
acggaatttcgaaacacctccaccagtgacacagttcttctctcagatgatgaatggcag
gtgttggtgctgacaggaaatacagggactcaagccaatgtcaccctctgggtgtatgga
gacaaaggagttattggaccactacctcttggcaagggcagtaaggagcagctgttcctt
ccaagaaaggagaatgaatttcaggttcaaatacagaacattggcaaaatatacaagatc
agaataggacatgatggaaccagtgaacagcctgaatggagtttacaaatggtgaaaatg
aagcatttaaagagtgggaagaccctcaattttgcagcaaacaagtgtttatctagaatc
caaggagatggagacattgtctgtgagctgcctgtagaagaagatggaaaagcgttgttt
ccaatagtgagataccatgtttatgtctacactggccagttgaaggaagcagaaaccaca
tctgcagtttatctgtgtctttatggagaaagaggtgactctggtgttagacttttatac
aaatcagataagccaataaaattccaaagaggtcagattgataagtttcaagtggaagct
gtatcccttgggaagcttcagaaggctctgttgctctgcaaggccactgaccaatcagag
tactggtattgtgagaaagttatcatcagggaaccaatgaaggaatcagagtccatattc
aactgtgaaaggtggcttccttttatgtcccagggcatcattcactcagaaatagaactt
tatcctcaagaaatgcaaataaagcatcagcctaaaacgcaagaggaagcaaatgaagga
gactggaagataactgttgtcacaggagattttgagaaggctggcacaactgctacagtg
tctctttatgcttatggagaaaagatgtcttcaggtcccatcattttggggtctgggaag
caccagttgtttaaccccaacagtgcagacatatttaagattaatcttaaagatattggt
gaattgtataaaatacgcatcgaacatgacaatagtggaaaagatcctagttggtatttg
gaagaaattaaacttgaagaaatagacactgggaaggtgttttcactcacagtggattgt
tggatacctgagaatgaaaatgatggagacacttgcaaagaaatagctatcaaccagcct
tacaagaagcccttgccattggtgatttatgagattcatgtctacactggatcaaagctg
ggtgctgaaactgactctaatgtgttaatcaaccttattggaaccaggggagattctggg
aaacgaaggcttcataagtctatgaataaccaagtcaagtttcaacaaggacaggtggac
atctttgtcattaagtctgtgtctcttggagaactgaagaaagttctgattagtcatgat
gggactggtccaggcaatggatggtttcttgagaagattattattaaatttaaagaggat
aaagaagatcaagaagtactgttcccatgtgagaggtggttggatgagtaccaggaggat
gggaagactgagagggagctgactgctgaaaatggacagtggatcatacaagtgaaaaca
gctgaagattctccagaagctaaagaatgcaagaggacagtggtgatttatggttcaaaa
gggaaaagcagagaactcctcctttcaccacaaaatcctggacaaatatgttttcttcct
ggagctttagatgaattccttattgaaactggagatgttggagatgtgtacaagattcgg
gtcagctgtgatgatttgccgggctttgagggttggcatttgaagtcttttcacatagag
gagctacataccaaacaagaaatgaactttgactgtagctgctggttctctcttaacaga
gaagatggagaactggtgaaagaattccctgcagagacaaaggaccgaaaccctttacca
gttgttaaatacattgttactatatacactggagaccaatggggagctgaaacttttgcg
aatgtttatatcactctctatggacaaagaggcgactctggtgctaggaagttatatcgc
tctttgaaaaaaggagaattgtttcaaagaaacaagctggatatattcttaatagaagct
gtttccctgagtcacttggagaaggtgctttttgaacatgatggagaaggttatggagct
ggaatttatttgaagatgataaccattcaggagtccaaagacccagaaattgaatgggta
ttcccatgttggaattggctggattcccacttgggagcctatttgactatttcagaactg
aagactatagggaaaagactgatttgtaccccagagaagcccctgatcaatgggcattcc
cctggttcatggatagtggacatcaatggatccgggttgagcaccaaagaagggatgatg
gaactttccctagtcttttatggacatctgaatcacaaaaagttgacacttcacatgaca
gaaaatagagcacaaatcaaagatgcacttgagggcattggagcactctataagcttcag
gtgtcaggaacatcaatacagctgaaaaagtcttggcatttagacacagtaaacctgaag
catacaggcaccatcctggaaatgtggttgatttttgacagctggtttaggccaaatgaa
gaggactgtgtggaacttcctactcttatttcaggccaagatcctctaccagttatagag
tactctattgagatacacactggagatgtgaagaatgcaggtgccacaggccaagcttat
atttacataaaaggagaaagaggagactcagggaaaagatggattaataattcaagaagt
agtccaaccacattttccaggggacaggtggaggtttttacagtcaaagcagtgcacctt
ggtaaactgcatcagattattcttggattccagagtttgaaaaaagataattggttcctt
gataaagttgttataaaggaagaacactcctccactatcacttacatctttgttcatcac
agttggatcaacaaagatccagaaaaagaatttggtgaagtaataattccattgaaaggt
tacactaatcctacctga
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integrated database retrieval system
