Monodelphis domestica (gray short-tailed opossum): 554187
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Entry
554187 CDS
T01031
Symbol
APOBEC1, APOBEC-1
Name
(RefSeq) apolipoprotein B mRNA editing enzyme catalytic subunit 1
KO
K16932
C->U-editing enzyme APOBEC1 [EC:
3.5.4.36
]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdo03019
]
554187 (APOBEC1)
Enzymes [BR:
mdo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.36 mRNA(cytosine6666) deaminase
554187 (APOBEC1)
Messenger RNA biogenesis [BR:
mdo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
APOBEC1-ACF complex
554187 (APOBEC1)
mRNA cycle factors
Common to processing body (P body) and stress granule
554187 (APOBEC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APOBEC4_like
NAD1
APOBEC1
SNAD4
APOBEC2
APOBEC_N
NAD2
APOBEC4
APOBEC3
APOBEC_C
Toxin-deaminase
AID
dCMP_cyt_deam_1
Gmx_para_CXXCG
MafB19-deam
Motif
Other DBs
NCBI-GeneID:
554187
NCBI-ProteinID:
NP_001028154
Ensembl:
ENSMODG00000018004
UniProt:
Q9TUI7
LinkDB
All DBs
Position
8:complement(105213203..105222916)
Genome browser
AA seq
235 aa
AA seq
DB search
MNSKTGPSVGDATLRRRIKPWEFVAFFNPQELRKETCLLYEIKWGNQNIWRHSNQNTSQH
AEINFMEKFTAERHFNSSVRCSITWFLSWSPCWECSKAIRKFLDHYPNVTLAIFISRLYW
HMDQQHRQGLKELVHSGVTIQIMSYSEYHYCWRNFVDYPQGEEDYWPKYPYLWIMLYVLE
LHCIILGLPPCLKISGSHSNQLALFSLDLQDCHYQKIPYNVLVATGLVQPFVTWR
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgaattctaagacaggtccatcagtaggagacgccactctaaggaggaggatcaaaccc
tgggaatttgtggccttctttaaccctcaagaactccgtaaagagacatgtctcctctat
gaaattaaatggggtaatcaaaatatttggcgacactccaatcaaaatacatctcaacat
gctgaaatcaacttcatggaaaaattcactgcagaaagacattttaactcttctgttaga
tgctccattacctggttcctctcttggagcccttgctgggagtgttccaaggccataaga
aagtttttggatcattaccccaatgtgactcttgccatttttatttctcggctttattgg
cacatggatcaacagcatcgtcaaggactcaaggaacttgtccactctggagtgactatc
cagattatgagctactcagagtatcattactgttggagaaattttgttgactatccacaa
ggggaagaagattactggcccaaatacccctacctttggattatgttatatgtcctggaa
ctccactgcataattttagggcttccaccttgtttaaagatttcagggagtcattccaat
cagcttgcgctcttcagccttgatttgcaagactgccattaccaaaagattccatataat
gttcttgtagccacagggctggtccagccatttgtgacctggagatga
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integrated database retrieval system
