Microchaete diplosiphon: NIES3275_00270
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Entry
NIES3275_00270 CDS
T09944
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
mdp
Microchaete diplosiphon
Pathway
mdp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mdp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NIES3275_00270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdp03400
]
NIES3275_00270
Enzymes [BR:
mdp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
NIES3275_00270
DNA repair and recombination proteins [BR:
mdp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
NIES3275_00270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Hobbit
Motif
Other DBs
NCBI-ProteinID:
BAY88053
LinkDB
All DBs
Position
complement(36289..37521)
Genome browser
AA seq
410 aa
AA seq
DB search
MTSDFVNSLIPDTALSVAGLTDYIRLLLEQDHQLRQVWVTGEVSSANHHRSGLFFTLQDP
DGTAGIKCVAWNSQLAKLAQIPIPGEQLIILGSLRVYPQRGEYQLSVWQALPAGEGLQAL
RYQQLKNRLLSEGLFDPERKRSLPSHPQTIAVITSPTAAAWGDIQRTLKQRYPGLQVLFS
PATVQGEQAPESIVKAIERVERDGRAEVLILSRGGGAVEELACFNDERVVRSLANCSIPV
ITGIGHQRDESLADLVADVCVHTPTAAAELVVPALAELYTQHRQRVEALQEAVLYSTQAA
EHKLRVLQNRLQHLRLDRQLQQEKQRLAWKHQQLVQVTKRRSQQASQHLEMLRQKLATLD
PKAVLQRGYAVVRQENGAIARTAADLAVGDELLIQLGQGEVKVKVKEVKD
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgacttccgattttgtcaactctttaattcctgatactgcactttcggtagctgggtta
actgactacatccgcttgctgttggaacaagatcatcaactgcgacaagtttgggtaaca
ggagaagtttccagcgctaatcaccatcgcagtggtttatttttcaccttgcaagatccc
gatggtacagctggaattaaatgtgtagcgtggaatagccaattggcaaaactggcgcaa
atccctattcctggtgagcagttaattattttaggtagtctcagagtttatcctcaaagg
ggagaatatcagctatctgtttggcaagctttacctgctggtgaaggtttacaggctttg
cgttaccaacagttaaaaaaccgcttgctatctgaggggttgtttgatcccgaaagaaag
cgatcgcttccttctcatccccaaaccatcgctgtgatcacttcaccaacggctgcggct
tggggtgatattcaaagaaccctaaaacaacggtatccagggttacaggttttattttct
ccggcgacagtacagggggagcaagcaccagaatcgatagtgaaagctattgaacgcgta
gaacgggatgggcgagccgaggtgctaattttgtcacggggaggcggcgcagttgaggaa
ttagcttgctttaacgatgaacgagtcgtgcgatcgctagctaattgttctataccagta
attactggcattggtcatcaacgagatgaatctttggcagatttagttgcagatgtatgc
gtccatactcccactgctgcggcagaactggttgtgccagccctggcggaattgtatact
caacatcggcaacgagtggaagctttacaagaggcggtactttactctacacaagctgct
gaacacaagctgcgagtattgcaaaatcggctgcaacatttacgcttagatcggcaatta
caacaagaaaagcaaagactagcttggaagcatcagcaattagtgcaagtcacaaaaagg
cgatcgcaacaagccagccaacatctagaaatgttaaggcaaaaattagctactctcgac
ccgaaagccgtattacagcgtggttacgccgtagtcagacaagaaaatggtgcgatcgct
cgaactgctgcagatttagctgtgggtgatgagttattgattcaattgggacagggagaa
gttaaagtgaaagtgaaagaagtaaaagattag
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