Microchaete diplosiphon: NIES3275_00730
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Entry
NIES3275_00730 CDS
T09944
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
mdp
Microchaete diplosiphon
Pathway
mdp00300
Lysine biosynthesis
mdp00470
D-Amino acid metabolism
mdp01100
Metabolic pathways
mdp01110
Biosynthesis of secondary metabolites
mdp01120
Microbial metabolism in diverse environments
mdp01230
Biosynthesis of amino acids
Module
mdp_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mdp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NIES3275_00730
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NIES3275_00730
Enzymes [BR:
mdp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
NIES3275_00730
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BAY88098
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Position
complement(84125..85528)
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AA seq
467 aa
AA seq
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MVSTHPTGVQQAGSQYLPARRSTSPNQELLPLTAQVNSHGCLEIGGCDITTLIKQFGSPL
YILDEETLRSACQQYRDAFQQYYQGESQVLYASKAWNCLAVCAIVADEGLGIDVVSGGEL
YTALSAGVSPEKIYLHGNNKSRSELILAIESGVTIVVDNWYELKTLVEIAEEQGENSFPL
PIRIMLRLTPGIECHTHEYIRTGHLDSKFGFDPNDLDEVFTFVSKQSALNCAGLHAHIGS
QIFERQPHQDLAAVMVQWLRDAAKYGLNVTELNVGGGLGIRYVESDDPPSIDEWVKAICD
VVQTACAAENLPLPKLLSEPGRSLIATACVTAYTIGSSKVIPEIRTYIAVDGGMSDNPRP
ITYQSEYRAVVANKISAPLTETVTIAGKHCESGDILIKNAQLPQTEPGDILVVMGTGAYN
YSMASNYNRLPRPAAVVVSNGEANLILQRETYQDLIRQDCLPERLKK
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggtatcgactcaccccactggggttcaacaggctggtagtcaatatttacctgcaagg
cgtagcacttcgcctaatcaagaacttttacccttgacggctcaagtaaatagtcatggc
tgcctagaaattggtgggtgtgatatcacaaccctaataaagcagtttggctcgccttta
tatattttagatgaagaaaccctgcgttcggcttgtcagcaatatcgagatgctttccag
caatattatcagggagaatctcaagtactttatgcttctaaagcttggaattgtttagca
gtttgtgcgattgtcgctgatgaaggcttgggaatcgatgtcgtgtctgggggagaactc
tacaccgccctcagcgctggggttagcccagaaaaaatttacctccacggcaataataaa
tctcgctcagagttaattttagcgattgagtctggtgtcaccattgtggtggataactgg
tatgagttaaaaaccttagtggaaatagcagaggagcaaggagaaaattccttcccgcta
cccattcggattatgttgcgcttgacaccaggtattgagtgtcacactcatgagtacatc
cgcacgggacacttagatagtaaatttggcttcgatccaaatgatttggatgaggtgttt
acctttgttagtaagcaatcagccttgaattgtgctggtttacacgctcacattggttct
caaatttttgaacgccagccccatcaggatttagcggcggtcatggtgcagtggttgcgg
gatgcagccaagtacggtttaaatgtgacagagctaaatgttggcggtggtttaggcatt
cgctatgtagaatcagacgatccaccaagtattgatgaatgggtcaaagcgatttgtgat
gtagtgcaaacagcttgtgcagcagaaaatctacctttacccaagttattatcggaacca
gggcgatcgctgattgccacagcttgtgtaactgcttatacaataggttcatcaaaggta
attccggaaatccgtacttacatagcagtagatggaggtatgtcagacaatccacgaccc
attacctaccaatcagagtaccgggctgtggtcgctaacaaaatttctgctcccttgaca
gaaactgtcacaattgctggtaagcactgtgaatctggggatattttgattaaaaatgcc
caactcccacaaactgaacctggggatattctcgtagttatgggaactggtgcttacaat
tacagtatggcatctaactacaatcgcttaccccgaccggcagctgttgtagtctcaaac
ggcgaagcaaatttaattttgcaacgcgaaacttatcaggacttaattaggcaagattgc
ctaccagaaaggctcaagaaatag
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