Microchaete diplosiphon: NIES3275_03090
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Entry
NIES3275_03090 CDS
T09944
Name
(GenBank) periplasmic binding protein/LacI transcriptional regulator
KO
K10439
ribose transport system substrate-binding protein
Organism
mdp
Microchaete diplosiphon
Pathway
mdp02010
ABC transporters
mdp02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
mdp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NIES3275_03090
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
NIES3275_03090
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mdp02000
]
NIES3275_03090
Transporters [BR:
mdp02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
NIES3275_03090
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
GSH-S_ATP
Skp1
Motif
Other DBs
NCBI-ProteinID:
BAY88334
LinkDB
All DBs
Position
382414..383406
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AA seq
330 aa
AA seq
DB search
MNVNRIAIVASLLGIVSTTLSGCISPNISRNSTNAIGANGNHQGKLKAVGVTVGDLSNPF
FVLMGKGAESEAKKIGGNDVRVTVVSSGYDLNQQFNQIENFVAANTDLIVLNAADSKGIR
PAVDKARQAGTVVIAVDTAVDAQVDATVTTNNLQAGEVACQYIADRLKGKGNVVIVNGPP
VTSVIQRVNGCENTLAKYPNIKILSKNQNAEGSRDGGLRVMSDLLVTFPKIDAVFAINDP
SGVGVDLAANQAKRKEFFIVGVDGAPEAINAIASKKSLYAATATQNPRGMTQKAVQVGND
ILQGKKPSNPNILIPVKLITQDNVSTFPGW
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtaaataggattgcaatagtagccagtctattaggtatcgttagcacaaccctt
agtggctgtattagtcctaatatttctcggaatagcacaaatgctataggtgctaacggc
aatcatcagggaaaattaaaagctgttggtgttaccgttggcgatttaagtaacccgttc
tttgtgctgatgggtaaaggtgctgaaagcgaagccaagaaaattggcggtaatgatgtc
agagtgactgtagtttctagcggttatgacctcaaccagcaatttaaccaaattgaaaat
ttcgtggctgcaaatactgacttaatcgtcttgaatgcggctgatagtaaaggtattaga
cctgcagttgataaagcaagacaagcaggtacagttgtaattgcggtagatacagcagtt
gacgctcaagttgatgccactgttaccaccaataatttgcaagctggagaagttgcttgc
cagtatattgccgatcgcctaaaaggtaaaggtaatgtcgtcatcgtcaacggcccgcca
gttacttcagtaattcagcgagtcaatggttgcgaaaataccttagctaaatatcccaat
attaaaatcctttcaaaaaaccagaacgccgaaggtagcagagatgggggattgagagtc
atgagtgatttactagttaccttccccaaaatagatgcagtctttgccattaacgacccc
agtggcgtaggtgtagacttagcagctaaccaagctaaacgcaaagaatttttcatcgtc
ggggttgatggtgcgccagaagcaattaatgcgatcgcatccaaaaaaagtctttatgca
gccacagccacccaaaaccccagaggaatgacgcaaaaagctgttcaagtgggcaatgac
attttacagggtaaaaaaccgagcaatcctaacattcttattcctgtgaagttaattact
caagacaacgtcagcaccttcccagggtggtga
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