Microchaete diplosiphon: NIES3275_03500
Help
Entry
NIES3275_03500 CDS
T09944
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mdp
Microchaete diplosiphon
Brite
KEGG Orthology (KO) [BR:
mdp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mdp03016
]
NIES3275_03500
Enzymes [BR:
mdp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
NIES3275_03500
Transfer RNA biogenesis [BR:
mdp03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NIES3275_03500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
DNA_pol_B_2
DUF2730
Motif
Other DBs
NCBI-ProteinID:
BAY88375
LinkDB
All DBs
Position
complement(440215..440844)
Genome browser
AA seq
209 aa
AA seq
DB search
MTLQDFQVSDRDLSDAALSQYLKSEAIAVDTETMGLLPQRDRLCLVQLCNPGGQVTAIRI
AKGQTEAPNLQKLLEAANIEKVFHFARFDIATLRYNLGITVQPVFCTKIASKLARTYTNR
HGLKDVVQELEKVELDKSAQSSDWGNAANLSGEQLNYAANDVRYLLSVRDKLIAMLQREE
RWQLAQECFQVLPTIVTLDLLQFKDIFEH
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgacattacaagattttcaagtgagcgatcgcgacctgagtgacgctgcgctgtcccag
tatttaaaatcagaggcgatcgccgtggatacggaaacaatgggattactaccacagcgc
gatcgcctttgtcttgtccaattatgtaacccaggggggcaagtaactgcaattcgcatc
gctaaaggacaaactgaagcaccaaacttacaaaaactgttagaagcagccaatatcgag
aaagtatttcactttgcgcgtttcgatattgctactttacgttacaacttaggtattact
gttcagcctgttttttgtaccaaaatagctagtaaactagcgcgtacttatactaatcgc
cacggactaaaagatgtagttcaggaattagaaaaagtagaactggataaaagcgctcaa
agttctgattggggtaatgctgctaatttatctggagaacagctcaattatgctgctaat
gatgtgcgctatttacttagtgttagagataaactaattgccatgctccaaagagaagag
cgttggcagcttgctcaagaatgttttcaagttctgcccacaatcgtgactttagattta
ttacaatttaaagatatatttgaacattaa
DBGET
integrated database retrieval system
