Microchaete diplosiphon: NIES3275_09070
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Entry
NIES3275_09070 CDS
T09944
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
mdp
Microchaete diplosiphon
Pathway
mdp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mdp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NIES3275_09070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdp03400
]
NIES3275_09070
DNA repair and recombination proteins [BR:
mdp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
NIES3275_09070
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
T3SS_SCTL
DUF7291
Motif
Other DBs
NCBI-ProteinID:
BAY88907
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Position
1110279..1112954
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AA seq
891 aa
AA seq
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MTAFDSEFQPTESNHPTAPHSDTRLVDRSKLSKMYQHYVEMKDKYLHALLLYRVGDFFET
FFQDAVTVSRELELVLTSKHGGEVGRVAMTGVPHHAWERYTTQLVEKGYAVVICDQVEDA
SEAVGLVRREVTRILTPGTLLEEGMLKASRNNYLSAVVIAANHWGLAYADISTGEFLTTQ
GSDLEHLTQELMRLQPSEVLFPTNAPDLGSILRPGETSPHLPQCLPPAFCYSLRSQVPFS
AGEARSRLLQKFKVRSLEGLGCEHLPLAVRAAGGLLEYLADTQKENSVPLQLLRTYTVTD
YLIVDHQTRRNLEITQTVRDGTFHGSLLWALDRTNTAMGGRALRRWLLQPLIDIKGIQAR
QDTIQELVENTALRQDLRQLLRQIYDLERLTGRAGSGTANAKDLVALADSLSRLPELSEL
VSEAYSPFLRALQKVPAKLEELAQKLHAHIVESPPIHIKEGGLIRSGVNNLLDESKATVE
ADQQWIANLEVDERARTGIPTLKVGFNKTFGYYISISRAKSDQVPSNYIRKQTLTNEERY
ITPELKEREARILSARDDLNQLEYEIFVALREEVGEQAEVIRNLSRAVAAVDVLCGLAEL
AVNQGYCRPQMVPGREIQIVDGRHPVVEQSIPSGFFVPNSTQLGDESAKLSSSSPSSPSS
PSSPSSPSSPSSPSSPSSPSSPSSPSSPDLIILTGPNASGKSCYLRQVGLIQLMAQTGSF
VPARFAKLGVCDRIFTRVGAVDDLATGQSTFMVEMNETANILNHATLRSLVLLDEIGRGT
ATFDGLSIAWAVAEYLATDIKARTIFATHYHELNELAGMLANVANYQVTVKELPDQIIFL
HQVQPGGADKSYGIEAGRLAGLPAVVIKRAKQVMGQIEKHSKIAMGLQNLD
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgacagcttttgattctgaatttcagccaacggaatccaatcatccaactgcgcctcac
tcggacacgcgactggtagaccgcagcaagttgagcaagatgtatcaacattatgtagaa
atgaaggataagtatcttcatgcgctgctgctatatcgcgtaggggatttctttgaaact
tttttccaagatgctgtgactgtatctcgcgaactagaactagttctgactagcaagcac
ggtggtgaagttggacgggtggcgatgactggtgtacctcaccacgcttgggaacgctac
actacccaattggtagagaaaggctatgctgtggtgatttgtgaccaagtagaagatgct
tccgaagctgtgggtttggtacggcgtgaggtaacacgcatccttacccctgggacgttg
ctggaagaaggaatgctgaaagcaagtcgtaataattacctgtctgctgtggtaattgcg
gctaatcattggggtttagcctatgcagatatatcaacaggggaatttctcacaacacaa
ggaagtgatttagaacacctcacccaagagttaatgcgtttacagccttccgaggtgctg
tttcctacgaatgctcccgatttaggtagcatattacgtccgggagaaacttcgcctcat
ctcccccaatgtttaccgccagctttttgttatagtttgcgatcgcaagtaccattttct
gctggagaagctagaagtagattattgcagaaattcaaagtgcgatcgctcgaaggtctg
ggttgtgaacatttgcccttagctgtgcgggcggctggcggtcttttagaatatttggca
gatacgcaaaaagaaaactccgttccgctgcagttattacgcacctataccgtcactgat
tatctcattgttgaccatcaaacccggcgtaacttagaaattacccaaaccgttcgcgat
gggacttttcacggttccttgctgtgggcgttagatagaacgaataccgctatgggcggg
cgggctttgcggcggtggttactgcaaccacttatcgatattaaaggcattcaagccagg
caagataccattcaagaattagtcgaaaatacagcgttacgtcaagatttgcggcagtta
ctccggcaaatttatgacttggaacggttaacaggtagggctggttcggggactgcaaat
gctaaagatttagtcgctttggcagattccctctctcgcctaccagaattatcagagtta
gttagtgaagcttattctccctttttaagggctttgcagaaagtgcccgcaaaattagaa
gagttggcacaaaaattacacgcccatattgtcgagtcaccacccatacatattaaagaa
ggtggtttaattcgctctggtgtaaataatttattggatgagagtaaagctactgtagaa
gcggatcagcagtggattgctaatttagaagttgatgaaagggcgagaacgggcatcccc
actttaaaagtaggatttaataaaacctttggttactacatcagtatttctcgtgctaaa
tctgaccaagttcctagtaattacatccgcaagcagacgctgacgaatgaggaacgttac
atcactcccgaattaaaagaacgggaagcccgaattctttccgcccgtgatgatttaaat
cagttggaatatgagatttttgtcgccttgcgggaagaagtgggagaacaggcggaagtc
attcgcaatctgtcgcgcgctgtggcggcggtagatgtgttgtgtggtttagccgagtta
gccgtaaatcaaggctattgtcgcccgcaaatggtacctgggcgagaaattcaaattgtc
gatgggcgacatccagtagtggaacagtctataccttcgggtttctttgtccccaactcc
acacagttaggagatgaaagcgctaaattatcctcctcatctccctcatctccctcatct
ccctcatctccctcatctccctcatctccctcatctccctcatctccctcatctccctca
tctccctcatctccctcatctcctgacttaattatcctaactgggcccaatgctagcggt
aagagttgttatttgcgtcaggtagggttaattcagttaatggcgcaaactgggagtttt
gtgccggcgagatttgccaagttgggagtttgcgatcgcatttttacccgtgtgggtgca
gtcgatgatttagctacaggtcaatctacctttatggtagagatgaacgaaaccgccaat
attctcaatcatgccacattgcgatcgctcgtacttttagatgaaattggtcgcggaact
gcaacctttgatgggctatctatcgcttgggcggtagctgagtatttagcaacagatatc
aaagccagaacaatttttgctacccattaccacgagttaaacgaactggcaggaatgtta
gcaaatgtggctaattatcaggtgacagtcaaagaattacccgaccaaattatcttttta
caccaagttcaaccagggggcgctgataaatcttacggtattgaagcgggtaggttagcg
ggtttaccagctgtggttattaaacgagcaaaacaagtcatggggcaaatcgaaaagcac
agtaaaattgcgatgggcttacaaaatcttgattag
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