Microchaete diplosiphon: NIES3275_10350
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Entry
NIES3275_10350 CDS
T09944
Symbol
cobD
Name
(GenBank) cobalamin biosynthesis protein
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
mdp
Microchaete diplosiphon
Pathway
mdp00860
Porphyrin metabolism
mdp01100
Metabolic pathways
mdp01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
mdp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
NIES3275_10350 (cobD)
Enzymes [BR:
mdp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
NIES3275_10350 (cobD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CobD_Cbib
AmpE
DUF2206
Motif
Other DBs
NCBI-ProteinID:
BAY89032
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Position
1300936..1301907
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AA seq
323 aa
AA seq
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MTHNIYILIFAAFLDYLIGDPWGWPHPVQVMGWVISHLSKLSLKYCHDSLTQRIAGIFLC
IFLIIGSGLVGWLIIQSAKWLHPLLAIALESILLASCFAGRSLRTASVTVLKPLTGGNLA
EARDILSNYVGRDTKNLSEAEILRAILETVTENATDGVMAPLFFAIVGGFIPFVGSVPLA
LAYKASSTLDSMVGYKEAPYTYLGWFSARLEDYLTWVPCRLTVITLALLSGKPLYVWRIC
SRDAIIDPSPNSGWSECAYAAILGVQVGGTNWYHGVAKHKPLLGDNIHPITPKSIESALQ
LTRYCFLLWIGVAIALFFLLLNR
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgactcacaacatttatatcttgatttttgctgcatttttagattatctaattggcgat
ccttggggttggcctcatccagtgcaagtaatggggtgggtaatttctcacctttccaaa
ctgtctctgaaatattgtcatgattctctaacacaaagaattgcgggaattttcctctgc
atctttttaataattggtagcggacttgttggctggttaatcattcaaagtgctaagtgg
ttgcatccactgttggcaattgctttagaaagtattcttttagctagttgttttgctggc
agaagtttgagaaccgcatctgttactgtcttaaaacctttaaccggaggaaatttagca
gaggctcgtgatattttaagtaattacgttggccgcgatactaaaaatctttccgaagca
gaaattttgcgcgccattctagaaacggtaactgagaatgctactgatggggtgatggct
ccgctattttttgcaattgtgggaggattcattccctttgtaggatctgtgcctttagct
ctagcatataaagccagtagtactctagattcaatggtgggctataaggaagcaccatac
acttatttaggttggtttagtgcgcggttagaagattacctgacatgggttccttgccgc
ttaacagtaatcacattggcgttattatcagggaaacctttatatgtttggcggatttgt
agccgagatgcaattatcgatccaagtcccaattctggctggagtgaatgcgcctatgca
gcaattttaggcgtacaggtaggcgggacaaattggtatcacggcgtagctaaacacaaa
ccattgctgggagataacattcatcccatcactcccaaaagtattgaatcggctttgcaa
ttaactagatattgctttttactgtggataggggttgcgatcgctctattctttctactg
ctaaacaggtaa
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