Microchaete diplosiphon: NIES3275_16220
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Entry
NIES3275_16220 CDS
T09944
Name
(GenBank) RNA-binding S1 domain-containing protein
KO
K06959
protein Tex
Organism
mdp
Microchaete diplosiphon
Brite
KEGG Orthology (KO) [BR:
mdp00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
NIES3275_16220
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
HHH_3
Tex_N
HHH_9
Tex_central_region
S1
YqgF
S1_RRP5
HHH_7
OB_RRP5_4th
T2SSK
baeRF_family10
HHH
DUF7645
Motif
Other DBs
NCBI-ProteinID:
BAY89619
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Position
2084613..2086775
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AA seq
720 aa
AA seq
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MLNIPQLLATELDLKLYQVQNALELLAEGATIPFIARYRKERTNEMDEVQLRNLSDRYTY
LTELEERKAVILNAIANQGKLTDELKAQITSSLQKTELEDLYLPYKQKRRTRATIAREKG
LEPLAEFIKSLNVKNPVSASLETEAAKYISETQGVKSAQEALKGASDILAEEVAERAESR
AYIRDYLLESGIFTSRIKDEHPEGTTKFEMYRNYQAKVKNIAPHNILALCRGEAEGVLNF
EIAFDEDIVLSYLESQEIKTKVRAIRDFYQGMIKDAFNRLMKTSLMGEVIAEKKAYADFE
SIKTFETNLRELLLSAPAGMKPTLAIDPGFRTGCKVAVINQTGKFLEYQAVFPHQAAEQR
TKAAQTLKNLIEKYKIELIAIGNGTASRETEEFVSQVLQAMERKPTKVMVNESGASIYSA
SKVALEEFPDLDVTVRGAISIGRRLQDPLAELVKIDPKSIGVGQYQHDVDQKLLKKKLDE
TVESCVNYVGVDLNTASKELLTFVSGITPAVANNIVTYRNENGAFKNRRQLLKVPKLGPK
AFEQAAGFLRIRNGENPLDNTAVHPESYSVVEAIASDLNVPLNQVTQIAAKLQKANLKKY
VTDTVGEPTLRDILSELEKPGRDPRAEFKYATFKEGITEIKDLQEGMELEGIITNVANFG
AFVDIGVHQDGLVHISQLADRFVEDPKKIVKVGQVVKVRVLEVNEKLKRISLSMKAVRQG
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacattcctcaattactggcaactgaactagaccttaaactttatcaggtgcaa
aatgcgctggaacttttagcagagggtgcaacaatcccttttattgcacgctaccgaaaa
gagcgcaccaatgaaatggatgaagttcaattgcgtaatttatcggataggtatacatac
ttaacagaattagaagaaagaaaagcggtaattctaaatgcgatcgccaatcaaggtaaa
ctcactgatgaactaaaagcgcagattacttctagtttacaaaaaacagaacttgaggat
ttatacttaccatataaacaaaagcgccgcacccgcgctactatcgccagagagaaaggt
ttagaaccactggcagaatttattaaatcattgaatgtgaaaaatcctgtgtctgcttct
ttagaaacagaagcagctaaatatatttcggaaactcaaggcgtaaaatctgcacaagaa
gcgctcaaaggtgcatctgatatcttagcggaggaagttgccgaaagagccgaatcaagg
gcatatattcgggattacttattagaatcggggatatttacctctcggattaaagatgaa
catccggaaggcacaacgaaatttgaaatgtaccgcaactatcaagctaaggtgaaaaat
attgcacctcataatatcttggctttgtgtcggggtgaggcagagggagtattaaatttt
gaaatcgcctttgatgaagatatcgtactttcctacctcgaatctcaggaaattaaaacc
aaagtccgtgctattcgcgatttttaccaagggatgattaaagatgcatttaatcgcttg
atgaaaacttctttaatgggagaagtaatagccgaaaagaaagcctacgctgattttgag
tcgattaaaacctttgaaacgaatttacgggaattgctattatctgcacctgcagggatg
aagccaactttggcaattgatcctgggtttagaactgggtgtaaagtagcagtaattaac
caaacagggaaatttttggaatatcaagcggtatttccccatcaagcagcagaacaacga
actaaagctgcacaaactctcaaaaatctcattgaaaagtacaaaattgaattaattgcc
attggtaacggtacagcttcccgtgagactgaagagtttgtctcccaagtactgcaagct
atggaacgcaaaccgacaaaggtaatggtaaatgaatcgggtgcatctatatattctgct
agtaaagtggcactagaagaatttcccgatttagatgttaccgtacgtggtgccattagc
atcggtcggcggttacaagatcccttggcggaactggtgaaaattgatcccaaatcgatt
ggtgtaggacaatatcagcacgatgttgaccaaaagttgctcaagaaaaagttagatgaa
actgtagaaagctgcgtcaactatgtcggtgtagacttaaacacggcttctaaggaactt
ttaacttttgtctcgggaattaccccagcagttgccaataatattgttacctatcgcaac
gagaacggagcctttaaaaatcgccgtcaattgttaaaagtgccaaaactagggccaaaa
gcctttgaacaagcagcagggttcctgcggattcgcaacggtgaaaatcccttggataat
acagccgtgcatccagaaagttactctgtagtagaagcgatcgcatctgacctcaacgta
ccattaaatcaggtaacccaaatcgccgctaaactccaaaaggctaaccttaaaaaatac
gtcaccgatactgtaggcgaaccaacactgcgcgacatcctcagcgaactcgaaaaaccc
ggtagagatcctcgtgctgagtttaaatatgccactttcaaagaaggaattacagaaatc
aaagatttacaagagggaatggaattagaaggtatcatcaccaatgtcgctaactttggt
gcgtttgtagatatcggcgtacatcaagatggcttagtacacatctcccaactggcggat
agattcgttgaagatcccaaaaagattgtcaaagttggacaagttgtgaaagttagagta
ctagaagtcaatgagaaattgaagcgaattagtttgtcaatgaaagccgtaagacaaggc
tag
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