Microchaete diplosiphon: NIES3275_16960
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Entry
NIES3275_16960 CDS
T09944
Name
(GenBank) farnesyl-diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
mdp
Microchaete diplosiphon
Pathway
mdp00900
Terpenoid backbone biosynthesis
mdp01100
Metabolic pathways
mdp01110
Biosynthesis of secondary metabolites
Module
mdp_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
mdp00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
NIES3275_16960
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mdp01006
]
NIES3275_16960
Enzymes [BR:
mdp01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
NIES3275_16960
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
NIES3275_16960
2.5.1.29 geranylgeranyl diphosphate synthase
NIES3275_16960
Prenyltransferases [BR:
mdp01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
NIES3275_16960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
BAY89693
LinkDB
All DBs
Position
2156374..2157303
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AA seq
309 aa
AA seq
DB search
MVATDKFKKMPETATFNLSAYLKERQQLCETALDQALPVSYPEKIYESMRYSLLAGGKRV
RPILCLATSEMMGGTIEMAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGE
DIAILAGDGLLAYAFEFVAIATPLTVPRDRVLQVVARLARALGAAGLVGGQVVDLESEGK
TDTSLETLNYIHNHKTAALLEACVVCGGILAGASVEDVQRLTRYAQNIGLAFQIVDDILD
ITATQEQLGKTAGKDLKAQKVTYPSLWGIEESRVKAEQLIEAACAELDVFGEKAQPLKAI
AHFIISRNH
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggtagcaactgataagtttaaaaagatgccagagacagccacgtttaacctatcagcg
tatctcaaagagcgtcaacagctttgtgaaactgctttggatcaagcgcttcccgtttcc
tatccagagaagatttacgagtcgatgcgctattctctcttagctggtggcaaacgtgtg
cgtcctatcctgtgccttgctaccagtgaaatgatgggcggcacaatcgaaatggcaatg
ccaacagcttgtgcggtggaaatgatccacacaatgtcattaattcatgatgatttgcca
gcgatggataatgacgattaccgtcggggtaagctgacaaaccacaaggtttatggcgaa
gatatcgcgattttagctggcgatggtttgttggcctatgcttttgaatttgttgcgatc
gccacccctttaactgtccctagagatagagtattgcaggtagtagcgcgtcttgctcgg
gcattaggggctgctggcttggttgggggccaagtagtggatctagaatcagaaggtaaa
acagatacttccctagagactctgaattacattcataaccacaaaacagctgcccttttg
gaagcttgtgttgtttgtggtggtattttagcgggagcatctgttgaagatgtacaaaga
ctaactcggtatgctcagaatattggtctggcattccaaattgttgatgatattttagat
atcaccgctactcaagaacaattaggcaaaactgctggcaaggatttgaaagcgcagaaa
gttacttatcccagcctgtggggaattgaagaatctcgcgttaaagccgaacaactcatt
gaagcagcatgtgcggaattagacgtatttggagaaaaagcacaacctttaaaagcgatc
gctcattttattatcagccgcaatcactaa
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