Microchaete diplosiphon: NIES3275_25030
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Entry
NIES3275_25030 CDS
T09944
Name
(GenBank) WD-40 repeat-containing protein
Organism
mdp
Microchaete diplosiphon
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WDR55
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
CHAT
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
NBCH_WD40
ANAPC4_WD40
eIF2A
Beta-prop_WDR75_1st
Beta-prop_NWD2_C
Ge1_WD40
Beta-prop_EIPR1
PD40
TPR_12
Beta-prop_NUP159_NUP214
TPR_1
TPR_7
Beta-prop_Vps41
TPR_2
TPR_8
TPR_10
Beta-prop_Nup120_160
WD40_like
TPR_MalT
Beta-prop_IFT140_1st
APH-like_N
Beta-prop_DCAF4
TPR_11
Beta-prop_WDR75_2nd
TPR_16
PROPPIN
SNAP
Beta-prop_HPS5
Beta-prop_ELP1_1st
TPR_19
ARM_TT21_4th
Beta-prop_IFT140_2nd
TPR_NPHP3
TPR_21
PA14
RPN7
FliS
SHNi-TPR
DUF2989
Beta-prop_DCAF12
Motif
Other DBs
NCBI-ProteinID:
BAY90487
LinkDB
All DBs
Position
3188816..3194944
Genome browser
AA seq
2042 aa
AA seq
DB search
MRYCRTLLIAFITFLVVISPTFGQNLSILFPATQVLAQTPNQKANSALSGNFVDYFAEER
QFKGHEGSVNSASFSQDGKRIVTAGSDGTARIWDFSGKELLVLQGHQGSVRSANFSPDGQ
LIVTASFDGTARVWNNSGQQLAELKGHQGNVNSASFSPDGKRVVTAGADKTLRIWDVSGK
QLAEFKGHEGSIYSANFSPDGQRIVTAAADKTARVWDLSGKVLAELKGHTDTVWSASFSP
DGKQIVTASDDKTARVWDVSGKQLTVLQGHKDSVYSASFSADGQGIVTASVDKTALIWNA
AGKLVGKLLGHEGGINSVNWSQDNRWIISSSSDSNARIWDTNSSLVSELKGHRNGVKNAN
FSPDGKLIVSASWDGTARLWHNNGKLISELKGHRDGVTNAKFSPDGKLIVTASNDGSARI
WDTNGKLLAELKGHQGFIRNISFSPDGKLIVTASNDGTVRVWDNNGKLFANWVNSALLLT
EQKTERQSVIPVFVTDANFSPDGKQIVTASFEGMARIWDISGNLLAELKGHKGFVFTANF
SPDGKQILTASDDKTARLWDTNGKLLVELKGHQRGVNSANFSPDGKQILTASDDKTARVW
DTNGKLLAELKAHQGDVNSANFSLDGKQIVTASSDKTARVWDTNGKLLAELKGHEDTVNS
ANFSSDGKQIVTASDDGTVRVWHLSHTQLVEQQTSENPSTNIAKPQKLPSRACSGFFTSA
NFSPDSKQIVIVSWDKTACVWNISGKVLAELKGHQDYVNSASFSPDGKRIVTASKDKTAR
VWDTNGKLLAELKGHQGDVNSAQFNPDGKLIITTSNDKTARIWDTNGKLLLEINGFENSV
VDASFSPDGKRIVTASKDKTALVWDTNGKLLFELKGHQDDVNSASFSPDSKLIVTTSNDK
TARIWDTNGKLLLELNGFKDSVFDANFSPDGKQIITSSSTSSVWDTNGKLLFELKGDQGN
VSSASFSPDGKFIVTTSHKSARLWDTNGKLLTKLQRYQSGVNSASFSPDGKLIITLSTDA
TARVWNANGKLLAELEHPSVMSSADFSPDGKLILTVYDDTARVWNTSGKLLAELKGHKSS
LQSAKFSPNSQLVVTASNDNTARVWDISGKLLAELKGHQENVTSASFSPDSKQIITTSYD
RTVRIWDISGKLLAGLKVYQKDWTSASFSPNGELIILLTYDRICYVWDKSGNLVAELVHQ
NYVNSASFSPDGQRIVTTSDDKKAYLWNVQGKLLAELTGHQRDINSASFSPDGQKIVTTS
DDKTARLWDTSGKLLAEIKGHQDYVKNASFSPDGQRIVTASWDDTARVWDTNAKQLTVLA
LSEISSSPKVEADGLRDLQFYAPNCAQAFEPWQKALKIYQQISDRENQAVILEKLGNAYY
CLSDYTNAINSYSKASSIAQQNNYPEIQAKNLSNLGSVYNSLADYEPAIKYYEDALKLLQ
QQDIQLKAEILRGRGNIYNFQGKYHEAIKDYSQALAIDKNLKNTSGVAKDKVNLANVYYV
LGDYSKAIQYYKETLDLIPGESLAGLGNTYLSLGETTKAIELHNQSLAKARQNEDKEAEG
NALNNLTYALIKANNLPEAEKNLFEAMKIWESLRAGLNDANKVSIFEKQSRTYRLLQEVL
IAQNKINEALEISERGRSRAFVELLARRLSPNPTQKSNITPPNIEQIKQIAKAQNATLVQ
YSIVDQEDKQQTKESEIYIWVVKPTGEVAFHRQDIKPLLQKENKNLAQLVDISRLSIGVR
SRAGGIVAAAADGANQPKRLQQLYDLLIKPIANQLPSNPSDRIIFIPQGSLFLVPFPALQ
DEQNKYLVEKHTILTAPSIQLLDLTRQQKRAHQGKSASLPNLVVGNPTMPFVSLVPEGKP
QQLPALEGAEKEAKAIAPLLKTKAITGSQATETAIAQKMTQSRIIHLATHGLFDDLRGLG
SAIALAPAGKDDGLLTAEEILDLKLQAELVVLSACDTGRGKITGDGVIGLSRSFISAGVP
SIVVSLWQVPDTPTASLMTEFYQHSSKNSDKAAALRQAMLTTMKTHPDPVNWAAFTLIGE
VN
NT seq
6129 nt
NT seq
+upstream
nt +downstream
nt
atgcgttattgccgaacccttttaattgcttttattactttcctggtagtaatttcacca
acttttgggcaaaatttatcaatattgttccctgcaacccaggtgttagcccaaacgccg
aatcagaaagcaaattctgctttatcagggaactttgttgattactttgcggaagaaagg
caatttaaaggacatgaaggtagtgttaacagtgccagttttagccaagatggtaagcgc
atagtcaccgcaggtagtgacggaaccgcccggatatgggatttttcgggtaaggaattg
ctggtattacaagggcatcagggaagtgtgcggagtgccaattttagccctgatggacag
ttgattgtgactgcatcttttgatggtactgctcgtgtgtggaataattccgggcaacag
ttagctgaacttaaaggacatcagggtaatgttaatagcgccagttttagccctgatggg
aagcgggttgtaactgctggtgctgataaaactttgcggatttgggatgtttcaggaaag
cagttggcggaatttaaagggcatgaggggagtatttacagtgccaattttagtccggat
gggcagagaattgtcacggctgcggctgataaaacggcgcgtgtttgggatttgtcgggt
aaggtgctggcagagttaaaagggcatacggatacagtatggagtgcaagttttagccca
gatggtaagcagatagttacagcatctgatgataaaacggcgcgagtgtgggatgtatcg
gggaagcagttaacagttttacaaggacataaagatagtgtatatagcgccagttttagt
gcggatggtcaaggaatcgttacagcatcggtagataaaactgcactgatttggaatgct
gcgggaaaattggtaggaaagttgctaggccatgaaggaggaatcaatagtgtcaattgg
agtcaggataacaggtggattattagctcatcatctgacagtaatgctcgtatatgggat
accaatagcagtttagtatctgagcttaaaggacatcggaatggggtgaaaaatgccaat
tttagccctgatggtaagttgattgtctcagcatcctgggatggtactgctcgtttgtgg
cataacaatggcaagttaatatctgaacttaaaggacatcgagatggtgtaacaaatgcc
aagtttagccctgatgggaagctaattgttactgcatccaatgatggcagcgctcgtata
tgggatacgaatggcaaattgcttgcggaacttaaagggcatcagggtttcatcagaaat
atcagctttagcccagatggtaagttgattgtcactgcatccaatgacggaacagtgcgt
gtatgggataacaatggcaaattgtttgcaaattgggtaaattctgccctattacttaca
gaacaaaaaacagaacgacaatctgtaattccagtatttgttactgatgcgaattttagc
ccggatggcaagcaaattgttaccgcatcatttgaaggcatggcccgtatatgggatatc
tctggtaacttgcttgcagaacttaaagggcataaaggctttgttttcactgctaacttt
agcccagatggcaagcaaattcttacagcatccgatgataaaactgctcgtttgtgggat
acaaatggcaaattgctggtagaacttaaaggacatcagcgtggtgtcaacagtgctaac
tttagcccggatggtaagcaaattcttacagcatccgatgataaaaccgctcgtgtatgg
gatacaaatggcaaattgctggcagaactgaaagcacatcagggcgatgtcaacagtgct
aactttagcttggatgggaagcaaattgtcaccgcatcatctgataaaactgctcgtgtg
tgggatacaaatggcaaattgctggcagaattgaaaggacatgaagataccgttaacagt
gcgaattttagctcggatgggaagcaaatagtcaccgcatccgatgacggaacagtgcgt
gtatggcatctttctcacacccagctagttgagcaacaaacatctgaaaatccctcaacc
aatatagcgaaacctcaaaaattaccttctcgagcctgttctggtttctttacaagtgcc
aattttagtcctgatagcaaacaaattgttatcgtatcttgggataaaacagcatgtgta
tggaatatatcaggtaaggttcttgcagaactgaaaggacatcaggattatgtcaacagt
gccagctttagccccgatggcaagagaattgtcactgcatccaaggataaaacagcccgt
gtatgggatacaaatggcaaattgcttgcagaactcaaggggcatcaaggtgatgtcaac
agtgcccagtttaaccccgatggcaaactaatcattactacatcgaatgataaaacagcc
cgtatatgggatacaaatggcaaattgctcttagaaatcaatggttttgaaaactcagtc
gttgacgctagctttagccctgatggcaagagaattgtcactgcatccaaagataaaaca
gctcttgtatgggatacaaatggcaaattgctttttgaactcaaaggacatcaagatgat
gtcaacagcgccagttttagccccgatagcaagctaatcgttactacatcgaatgataaa
acagcccgtatatgggatacaaatggcaaattgctcttagaactcaatggctttaaagac
tcagtttttgacgctaactttagccccgatggtaagcaaattattacgagttcatctacc
tccagtgtctgggatacgaatggaaaactgctttttgaactcaaaggggatcagggtaat
gttagtagtgccagttttagtcctgatggcaagttcattgttaccacatcccacaaaagt
gcccgcctatgggatacaaatggcaaattacttacaaaactgcaaaggtatcagagcggt
gtcaacagtgccagttttagtcctgatggtaagctaattattaccttatctaccgatgct
actgctcgtgtgtggaatgcaaatggcaaattacttgcagaattagagcatccatctgtg
atgtcaagtgccgattttagtcctgatggtaagctaattcttactgtatatgatgatact
gcccgtgtgtggaatacatctgggaagctgcttgcagaactcaaagggcataaaagctca
ctccaaagtgccaaatttagccccaatagccagttagtggtcaccgcatctaacgataat
actgctcgtgtgtgggatatatctgggaagctgcttgcagaactcaaagggcatcaggaa
aatgttactagtgccagttttagcccagatagcaagcaaattatcactacatcttatgac
aggacagttcggatttgggatatatctggtaagctgcttgcaggactgaaagtctatcag
aaagattggacgagtgccagttttagccccaatggtgagctaattattctacttacatat
gacaggatatgctatgtgtgggataaatctggtaatttggttgcagaactagtgcatcaa
aactatgtcaatagtgccagttttagcccagatggtcaaaggattgtcactacatctgat
gacaagaaagcttatctatggaatgtgcagggtaagttacttgcagaattgacaggacat
cagcgcgatatcaacagtgctagttttagcccagatggacaaaagattgttaccacatct
gatgacaagactgcccgtctatgggatacatctggcaagttgcttgcagaaattaaagga
catcaggattatgtcaagaatgccagttttagtccagatggacaaaggattgtcactgca
tcttgggatgatactgcccgtgtgtgggacacaaatgctaaacaactaacagttttggct
ttatctgaaatttcttcttcccccaaagttgaagcagacggattacgcgatctacaattc
tacgcccccaattgcgcccaagcatttgaaccgtggcaaaaagctcttaaaatttatcaa
caaatctccgatcgcgaaaaccaagctgtcattctagaaaaactggggaatgcttactat
tgtctcagcgattacaccaacgctattaattcttacagcaaagcatcaagcattgcccaa
caaaacaattacccagaaatccaagccaaaaatctctccaatctcggcagtgtttataat
tctttagcagattatgaaccagcaattaagtattacgaagatgcattaaaacttctacaa
caacaagatattcaactcaaagcagaaattctccgagggcgaggaaatatttataatttc
caaggtaaatatcacgaagctattaaggattactcgcaagcattagccatcgataagaat
ttgaaaaatacctctggtgtagccaaagataaagtcaatttggcaaatgtctattatgtc
ttgggtgactactcaaaagctattcaatattacaaagaaactctagatttaatccctggc
gaatctttagccggtttaggaaatacttatctttctctaggtgaaactaccaaagcaatt
gaactccacaatcaaagcttggcgaaagcacgacaaaatgaagataaggaagcagaaggt
aatgcactgaataatttaacttatgctttgattaaagcaaacaatctcccagaagcagag
aaaaacctgtttgaagctatgaaaatttgggaatctcttcgcgctggattaaatgatgcc
aataaagtttctatctttgaaaaacaatctcgcacctatcgcctactgcaagaagtttta
attgctcaaaataaaattaatgaggcgttagaaatttctgaacgcggtcgttcgcgtgct
tttgtagaattactcgcaaggcgcttatctccaaacccaacacaaaaatcaaacattacg
ccgccaaatattgagcagattaaacaaattgcgaaagcacaaaatgccactttggtgcaa
tattcaattgttgatcaagaagataaacaacaaaccaaagaatcagaaatatatatttgg
gtagttaaacccacaggtgaagtggcatttcatcgccaagatatcaagccgttattgcaa
aaagagaataaaaacctagcccaattagttgatatctcccggctatctataggggtaaga
agtcgcgcaggtgggattgtcgccgcagcagctgatggtgcaaatcaacccaaacgctta
caacaactctatgatttgttaattaaaccgatcgccaaccagctacccagcaaccccagc
gatcgcattattttcattcctcaaggttccctgttcttggttcccttccccgcattacaa
gacgaacaaaacaaatacttagtagaaaaacacacaattcttactgcgccatcgattcaa
cttttagatttaactcgccagcaaaaacgagcacaccaaggtaaatcagcttctctgcca
aatttagtagtaggtaaccctacgatgccttttgtatcccttgtaccagaaggaaaaccg
caacaactaccagctttagagggtgcagaaaaggaagcaaaagcgatcgcacctctactc
aaaaccaaagcgatcacaggtagtcaggcaacagaaacagcgatcgcccaaaaaatgacc
caatcacggatcattcatttagccacacatggattgtttgatgatttacgtggtttggga
agtgctatagcccttgcacccgcaggtaaagatgatggtttattaactgcggaagaaatt
ttggatttgaaactacaagctgaactcgtagttctcagcgcctgtgatactggccgcgga
aaaatcacaggggatggagtaattggtttatctcggtcttttatcagcgcaggtgtacct
agcattgtagtttctctatggcaagtaccagatacaccaacagcatcgttaatgactgag
ttttatcaacatagcagtaaaaattctgataaagctgcggccttaagacaagcgatgttg
accactatgaagacccaccctgaccctgtcaactgggcagcgtttactttaattggcgaa
gtcaattga
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integrated database retrieval system